Bombyx mori (domestic silkworm): 732888
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Entry
732888 CDS
T02817
Name
(RefSeq) cleavage and polyadenylation specific factor 5
KO
K14397
cleavage and polyadenylation specificity factor subunit 5
Organism
bmor
Bombyx mori (domestic silkworm)
Pathway
bmor03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
bmor00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
732888
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bmor03019
]
732888
Messenger RNA biogenesis [BR:
bmor03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
732888
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Gene cluster
GFIT
Motif
Pfam:
NUDIX_2
NUDIX
Motif
Other DBs
NCBI-GeneID:
732888
NCBI-ProteinID:
NP_001040354
UniProt:
Q1HQ96
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Position
11:<3160553..3163640
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AA seq
227 aa
AA seq
DB search
MAAVQGPPGNKQWPARPGLQHQISQNPSMNLTLNRSINLYPLTNYTFGTKEPLFEKDASV
PARFQRMREEFCKIGMRRSVEGVLLVHEHGLPHVLLLQLGTAFFKLPGGELNPGEDEIDG
LKRLLTETLGRQDGVKQEWLIEDTIGNWWRPNFEPPQYPYIPPHITKPKEHKRLFLVQLQ
DRALFAVPKNYKLVAAPLFELYDNAQGYGPIISSLSQSLCRFNFIYM
NT seq
684 nt
NT seq
+upstream
nt +downstream
nt
atggcagcagttcaagggcctcccggtaacaaacagtggcctgcgcgaccaggactacaa
catcaaataagccaaaacccaagcatgaatttaactctcaataggtctattaatttgtat
ccgcttacgaattacacgttcggaactaaggagccgctgttcgagaaagacgcgtcggtc
ccggcgaggttccagaggatgcgagaggagttttgtaaaatcggaatgagaaggtcagtc
gaaggtgtgttattagtacatgaacatggtctccctcatgtgctgttactgcaactcggc
actgcgtttttcaagttgcccggtggagaattgaatcctggagaggatgaaattgatggt
ttgaagaggcttctcacagagactttaggcaggcaagacggtgtcaaacaggaatggctc
attgaagacacaataggaaactggtggcgaccgaatttcgaaccaccgcaatatccatac
attccgcctcacatcacgaaaccaaaggagcataagcgcctattcctggttcaactgcaa
gacagagctctgttcgctgtaccgaagaattacaagctggttgcggcaccattgtttgaa
ttgtacgataatgctcagggatacggacctataatatcgtcgttgtctcagagtttatgt
cgttttaatttcatttatatgtga
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