Bombyx mori (domestic silkworm): 733099
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Entry
733099 CDS
T02817
Name
(RefSeq) cleavage and polyadenylation specific factor 4
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
bmor
Bombyx mori (domestic silkworm)
Pathway
bmor03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
bmor00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
733099
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bmor03021
]
733099
03019 Messenger RNA biogenesis [BR:
bmor03019
]
733099
Transcription machinery [BR:
bmor03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
733099
Messenger RNA biogenesis [BR:
bmor03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
733099
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
Torus
zf-CCHC
zf-CCCH_2
zf-CCCH_4
zf-CCCH_3
zf-CCHC_2
Nab2-like_zf-CCCH_
zf-CCHC_3
eIF3g
Motif
Other DBs
NCBI-GeneID:
733099
NCBI-ProteinID:
NP_001040511
UniProt:
Q1HQ97
LinkDB
All DBs
Position
11:6321765..6324474
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AA seq
288 aa
AA seq
DB search
MEVIVANVEHIKFAIDYALEEQYGALPLPFPGMDKSTAAVCEFYSQPGGCGNGAQCPYRH
VRGDRTVVCKHWLRGLCKKGDQCEFLHEYDMSKMPECYFYARFNACHNKECPFLHIDPES
KIKDCPWYDRGFCRHGPHCRHRHVRRVLCINYLAGFCPDGASCKFMHPRFELPAPPDQPK
DAKRLPVCHSCSEVGHKASSCPKIPPDQREAAQKQEEARYRSLGYVKPAIEQEDNSGPRL
QKIVHKPIEEVTCFKCGAKGHYANKCPKGHLAFLSSQNQGGTNFRKQN
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atggaagtaatcgttgctaacgttgagcatataaaattcgctattgactatgctctagaa
gagcaatatggggctctaccgctaccattcccaggaatggacaaatctacagcagcggta
tgtgaattttattctcagcctggcggctgtggtaacggggcccaatgcccctatagacat
gttcgaggcgatcgtactgtggtttgcaagcactggcttcgaggactctgcaagaaaggc
gatcaatgtgagttcttgcacgagtacgacatgtctaaaatgccagagtgctatttctac
gccagattcaatgcatgtcataacaaggaatgcccatttctacacattgatcctgagagt
aaaataaaagattgcccatggtatgacagaggcttctgccgccatggaccacactgtcgt
cacaggcacgtacgacgtgtgctctgcataaactacctagccggtttctgcccagatgga
gcctcgtgcaaatttatgcatccacgctttgaattaccagcaccaccagatcaacccaaa
gatgcaaaacgccttcctgtttgtcacagctgttcggaagttggacacaaagcttcgtca
tgtccaaaaataccacctgatcaaagagaagcagcccagaagcaagaggaagctagatac
cgttccctgggctatgttaaacccgcaatcgagcaagaagacaacagtggtccaagatta
caaaaaatagtccacaaacccatagaagaagtaacctgttttaagtgtggcgcaaaaggt
cactatgcaaataaatgtcccaaaggtcatctcgcctttctctccagccaaaaccaggga
ggaacaaactttagaaaacaaaactag
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