Bombyx mori (domestic silkworm): 733138
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Entry
733138 CDS
T02817
Name
(RefSeq) cleavage stimulation factor subunit 2 tau variant
KO
K14407
cleavage stimulation factor subunit 2
Organism
bmor
Bombyx mori (domestic silkworm)
Pathway
bmor03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
bmor00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
733138
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bmor03019
]
733138
Messenger RNA biogenesis [BR:
bmor03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
733138
U7-dependent histone pre-mRNA processing factors
733138
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CSTF2_hinge
RRM_1
CSTF_C
RRM_10
RRM_7
DUF8400
RRM_Rrp7
Motif
Other DBs
NCBI-GeneID:
733138
NCBI-ProteinID:
XP_004930566
UniProt:
A0A8R2AQ37
LinkDB
All DBs
Position
6
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AA seq
392 aa
AA seq
DB search
MDKSKEKEEQSIMDKSMRSVFVGNIPYEATEEKLKDIFSEVGPVLSFKLVFDRETGKPKG
YGFCEYKDQETALSAMRNLNGYEIGGRSLRVDNACTEKSRMEMQALMQGPQVENPYGDPV
EPEKAPEAISKAVATLPPEQMFELMKQMKLCIQNNPNEARNMLLQNPQLAYALLQAQVIM
RIVDPATAVTMLHPSNPVPPILLPGDKPAQTNTYIPSNPPPAQPPIHNNPGPPPNQYNNS
RPSMDVDLRGSRAPGPAAPPNAMPALLDQDMRSLPPVAPHPVPPPMHHPQDPSYPRDPRL
ANAPPYNPDPRVRSSDPRNQQKPPQQMPPGMPSAAQARNIQGIPSGASDQEKAALIMQVL
QLSDEQIALLPPEQRASILLLKEQIAKSTQQR
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atggataaaagtaaagaaaaagaggaacaaagcatcatggataaatccatgagatctgtt
ttcgtgggtaatataccatacgaagccacagaagagaaattaaaggacatattcagtgaa
gtaggacccgtcttgtctttcaaacttgtcttcgatcgcgaaaccggtaaacccaaaggt
tatgggttttgtgaatataaagaccaggaaacggctttgagtgccatgagaaatctcaat
ggatacgaaattggtggtcgttcgttaagagtagataatgcttgtacagagaaatcgcga
atggaaatgcaagctctaatgcaaggacctcaggtagaaaatccttatggtgatccagta
gaacctgaaaaagcacctgaagcaatcagtaaagctgtggcgacattgcctccagaacag
atgtttgaactgatgaagcaaatgaaactttgtattcagaataatcctaatgaagctcga
aacatgcttttacaaaatccgcaactggcatacgcgctgctacaggcacaggtcataatg
agaattgtcgatccagccactgcagttacaatgcttcatccaagtaaccctgtacctcca
atcttactaccgggtgataaaccagcccaaacgaatacttatataccatccaatccacca
ccagcacaaccaccgatacacaataatcccggaccgccacccaaccagtacaacaattcc
cgtccgtccatggatgttgatcttcgcgggtcgcgagctcccggtcccgcggcgccccct
aacgccatgcccgcgctgctcgaccaggacatgcgcagtctgccgccggtcgccccgcac
ccggtaccgccgccgatgcatcatccccaagatcctagttacccgagagatccgcggttg
gccaatgctccaccgtacaacccggatccgagggtgcgttcaagcgatccacgaaaccag
cagaaaccgccacagcaaatgcctcctggcatgccgagcgctgcacaggctaggaacatt
caaggtattccatcgggtgcttctgatcaagagaaggccgcgttgataatgcaagtgctg
cagttatccgacgaacagatcgctttgttaccgcccgaacaacgcgccagtatactcctg
ctgaaagaacaaatcgcgaagagcacacagcagcgttag
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