Bacillus velezensis JS25R: NG74_01090
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Entry
NG74_01090 CDS
T03423
Symbol
sbcC
Name
(GenBank) Nuclease SbcCD subunit C
KO
K03546
DNA repair protein SbcC/Rad50
Organism
bmp
Bacillus velezensis JS25R
Brite
KEGG Orthology (KO) [BR:
bmp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bmp03400
]
NG74_01090 (sbcC)
DNA repair and recombination proteins [BR:
bmp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
NG74_01090 (sbcC)
Archaeal homologous recombinant proteins
NG74_01090 (sbcC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
AAA_21
ABC_tran
MMR_HSR1
Motif
Other DBs
NCBI-ProteinID:
AIU81201
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Position
1057070..1060462
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AA seq
1130 aa
AA seq
DB search
MKPILLTIKGLHSFREEQTIDFAGLSGAGVFGIFGPTGSGKSSILDAMTLALYGKVERAA
NNTHGILNHAEDQLAVSFTFALQSGHRVSYKVERVFKRTDETKVKTALCRLIEIKDEQTV
LADKANEVNKKVEELLGLTIDDFTRAVVLPQGKFAEFLSLKGAERRHMLQRLFNLEQYGD
RLVKKLRRRAQEAAAKKNEMLAEQSGLGDAGEDALKQAEQQFHEANERLEEAEKKRVRAK
ERFENHQEIWNLQTERDEYERREKKLEERRPYITDLTERLKEAETALALEPYADRYTEAV
RRKQRAEQEHELAKRKSEAETVTFTRQNEAYEAWRAHKAEQEPKLVKEDELYQRLSAIEQ
KLLEAKKEAEKTNAEHSKKEEEYEAASKQLAGVKDRLTRGQNRQNELKEELKAVQVTADE
RKKCQTAAQLAAGFQQTQEQITKERANLTTQLKNVEKLNGESESLTAKAKTEEEDITRAY
QTLQTVYHMVCETERSLKAAAERADKTQADLRRRSEEARTAALTKELSEKLIEGKPCPVC
GSTQHDRPRSAHETFSPDTAVQEQLQQVEALLSEAAALSQEVLTAKVALEEQSGRFTEEC
PFLQSARVPELEAASSISGRPLDEAFSAVRLEWKQMKQDMLSVKEKVTRLISAHQQTVKQ
AEQLAERIRYEEKEADRLRHSLEELESLSESRLNQYNEVCGDIPPNRIDAWQASIDEKDR
QAEECEKRIETSIAFLKEHEEEKERLQEMKHRLERERLELHYASERLQQVIDGYEQELGT
AAEETSISAKLEAVRQELQLLKSKEQSLFDALKRAQQSLNDAKGRESGSLMSLRDAETSL
EKAQNDWRVRSKDTGFTEPDQVKKSLLPQGRAEEMKKEIDEFLDTSKQLSANISRVTDKL
ADRRISEEEWTASVSLLKQAEAESGAAMEEKGAQAKAYAVMQKQHKRFKEIEAELKSWQT
QIDRLDKLQSVCKGNTFVEFLAEEQLESVARDASARLGALTRQRYAILVDSEGGFVMRDD
ANGGVKRPVSSLSGGETFLTSLSLALALSAQIQLRGQYPLQFFFLDEGFGTLDQGLLDTV
VTALEKLQSDNLSVGVISHVQELRARLPKKLIVHPSEPGGKGTRVTLEIM
NT seq
3393 nt
NT seq
+upstream
nt +downstream
nt
atgaagccgattctgttaacgataaaagggctccacagcttcagggaggaacagaccatt
gattttgccggactgtcaggagccggggtgttcgggattttcgggccgaccggaagcgga
aaatcgtcgatccttgatgccatgacactcgctttatacggaaaagtggagcgcgccgca
aataatacgcacggcatcctgaatcatgccgaagatcagctcgccgtctcatttacattc
gcgcttcaatccggccaccgggtttcctacaaggtcgagcgcgtttttaagagaacggat
gaaacgaaagtaaaaaccgccctctgccgcctgattgaaatcaaagacgaacaaacggtg
ctggccgataaagcgaatgaagtgaacaaaaaggtagaggagcttcttggcctgaccatt
gacgactttacaagagccgtcgtgctgccgcaaggaaagtttgccgagtttctgtcgctt
aaaggcgcggaaagaagacatatgctccagcgcctgtttaatctggaacagtacggggac
aggcttgtcaaaaaattgcggcggcgggcgcaggaagcggcagcgaaaaaaaatgaaatg
ctggccgaacaatccggcctcggagacgcaggagaagatgcgctgaagcaggctgaacag
cagtttcacgaagcgaacgaacggcttgaagaagctgagaagaaacgggtccgggcaaaa
gagcgttttgagaatcaccaggaaatttggaacttgcagacagaaagagatgaatatgag
cgccgggagaaaaagcttgaggaaagacgcccgtacatcacggatttgactgagcgtctt
aaagaggcggaaacagctctcgcccttgagccgtacgcagaccgttacacagaagccgtc
cgccggaagcagcgcgccgaacaggaacacgaactggccaaacggaaatcagaggcggaa
accgttacatttacccggcaaaatgaagcctatgaagcatggcgggcccataaggccgaa
caggagccgaagcttgtcaaggaagatgagctgtatcaaagactttcagccattgaacaa
aaactgcttgaagcgaaaaaagaagcggaaaaaacaaatgcggaacacagcaaaaaagag
gaagaatacgaagccgcctcgaaacagctggccggagtgaaagaccgcctgacccgcggc
caaaacaggcagaatgagctgaaagaagagctgaaagcagttcaagtgaccgccgatgaa
cggaaaaaatgccagaccgcagcacagctggcggcgggctttcagcagacacaggaacaa
atcacgaaagaacgggccaatctgacaacgcagctgaaaaacgtggagaagctgaacgga
gaaagcgagtcgctcacagcgaaagcgaaaacggaagaggaagacattacgcgcgcttat
caaacgcttcaaaccgtttaccatatggtctgtgaaacggagcgttcactgaaagccgca
gccgaacgggctgacaaaacgcaagccgatctccgcaggcgctcagaggaagcgagaacg
gctgcattaacaaaagaattatcggaaaaactaatcgaaggaaagccttgtcctgtatgc
ggctcgacgcagcatgaccgcccgcgttccgctcatgaaacattctcgcctgatacagct
gtacaggaacagctgcagcaggttgaagcactgctttctgaggcggcggctctttctcag
gaagtgctgacagccaaggttgcattagaagaacagtcggggcgttttaccgaagaatgt
ccgtttctgcaaagcgcccgggttccggagctggaagccgcttcctccatcagcggacgc
ccgcttgatgaagcgttcagcgccgtccgcttggagtggaaacaaatgaaacaggatatg
ctgtcggtaaaagagaaggtcacaagactgatcagcgcgcatcagcagacggtgaaacaa
gctgagcagcttgccgaacgaatccgctacgaggaaaaagaagccgaccgtctcagacat
tcattagaagagcttgaatcgctgtcagaaagccgattgaatcagtacaacgaagtctgc
ggtgatattccgccaaaccggattgacgcctggcaggcttcgatagatgagaaggacagg
caggcagaagaatgtgagaagcgcattgaaacaagcatcgcattcctcaaggaacatgaa
gaggagaaagaacgcctgcaggagatgaagcatcggcttgaacgggaacggctcgagctt
cactatgcgtcggagcgcctgcagcaggtgattgacggatatgaacaagagctcggaaca
gcagctgaagaaacatcaatttccgcaaagcttgaagcggtgcggcaggaattacagctg
ttaaaatcgaaagagcagtccctattcgacgcgctgaagcgggcgcagcaatcactgaat
gacgcaaaaggccgggaatccgggagtctcatgtcactcagggatgctgagacctccctt
gagaaagcgcaaaacgactggcgcgtgaggtcaaaagacaccgggtttaccgagccggac
caagtcaaaaaaagtctgcttccgcaagggcgtgcagaggaaatgaaaaaagaaatagat
gagttcctggacacctcaaaacagctatcggcaaatatcagccgtgttactgataaatta
gccgaccgccggatatcggaggaagaatggacagcatccgtttctctgctgaagcaggca
gaggctgagtcaggcgccgccatggaggaaaaaggagcacaggcaaaagcctacgcggtt
atgcaaaaacagcataagcgctttaaagagattgaagccgaactgaaaagctggcagaca
cagattgacaggcttgataagctccagtctgtatgtaaaggcaatacattcgtcgaattt
ttagcggaagaacagctggaaagcgtggctcgggacgcctctgcccgtctcggagcgctg
acaaggcagcggtatgccatattagtcgattcagaaggcggtttcgtcatgcgtgatgac
gcgaacggaggcgtcaaaaggcccgtatcaagcctttccggcggggagacgtttctgaca
tcgctgtcgcttgcgcttgccttgtccgcccagattcagctgcgggggcaatacccgctg
caattctttttcttagatgaaggattcgggactcttgaccaagggctcttagacaccgtt
gtcacagcgctcgaaaagctgcaatcggacaacttatccgtcggagtgatcagccatgtg
caggagctgagagcgcgtctgccgaaaaaattaatcgttcatccgtccgaaccgggcggg
aaaggcacccgggtcacattggagatcatgtag
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