KEGG   Bacillus velezensis JS25R: NG74_01485
Entry
NG74_01485        CDS       T03423                                 
Symbol
rnjA
Name
(GenBank) Ribonuclease J 1
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
bmp  Bacillus velezensis JS25R
Pathway
bmp03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:bmp00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    NG74_01485 (rnjA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bmp03019]
    NG74_01485 (rnjA)
Messenger RNA biogenesis [BR:bmp03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     NG74_01485 (rnjA)
SSDB
Motif
Pfam: RNase_J_C Lactamase_B RMMBL Lactamase_B_2 DUF5548 DUF4453
Other DBs
NCBI-ProteinID: AIU81577
UniProt: A0A1D9PIX2
LinkDB
Position
complement(1398995..1400662)
AA seq 555 aa
MKFVKNDQTAVFALGGLGEIGKNTYGVQFQDEIVLIDAGIKFPEDELLGIDYVIPDYTYL
VKNEDKIKGLFITHGHEDHIGGIPYLLRQVNIPVYGGKLAIGLLRNKLEEHGLLRQTKLN
IIGEDDIVKFRKTSVSFFRTTHSIPDSYGIVVKTPPGNIVHTGDFKFDFTPVGEPANLTK
MAEIGKEGVLCLLSDSTNSEVPDFTMSERRVGESIHDIFRKVDGRIIFATFASNIHRLQQ
VIEAAVLNGRKVAVFGRSMESAIEIGQNLGYITCPKNTFIEHNEINRMPANKVTILCTGS
QGEPMAALSRIANGTHRQISINPGDTVVFSSSPIPGNTISVSRTINQLYRAGAEVIHGSL
NDIHTSGHGGQEEQKLMLRLIKPKFFMPIHGEYRMQKMHVKLATDCGIPEENCFIMDNGE
VLALKGEEAAVAGKIPSGSVYIDGSGIGDIGNIVLRDRRILSEEGLVIVVVSINMDDFKV
SAGPDLISRGFVYMRESGDLINDAQQLISNHLEKVMDRKTTQWSEIKNEITDTLAPFLYE
KTKRRPMILPIIMEV
NT seq 1668 nt   +upstreamnt  +downstreamnt
atgaaatttgtgaaaaatgaccagactgccgttttcgccctcggcggattgggcgagatc
gggaaaaatacgtacggggtgcagtttcaggatgaaattgtactgattgatgcgggaatc
aagttcccggaagatgaacttctcggcattgattacgtaatccccgattacacgtattta
gtaaaaaatgaagataaaattaaaggtctgtttatcacccacggtcacgaagaccatatc
ggcggtattccgtacctgctcagacaagtaaatattcccgtttacggcggtaaactcgcg
atcggcttacttcggaataaacttgaagagcacgggctgttaagacagaccaaattaaac
atcatcggtgaagacgacatcgtgaagttccgcaagacgtctgtatccttcttcagaacg
acacacagcattccggattcatacggaatcgtcgtcaaaacaccgccgggcaatatcgta
cataccggggactttaagttcgatttcacaccggtaggcgaaccggcaaacttgacaaag
atggctgaaatcgggaaagaaggcgttctgtgcctgctttctgacagtacaaacagtgag
gttcctgatttcaccatgtcagaacgccgcgtaggcgaaagcattcacgatattttccga
aaagtggacggcagaattatatttgcgacattcgcttcaaatatacaccgtcttcagcag
gtgattgaagcagccgttttaaacggcagaaaagttgccgtattcggacgcagtatggaa
tcggctattgaaatcggacaaaatctcggttacattacctgtcctaaaaatacgtttatt
gagcataacgaaatcaatcgtatgcctgccaataaggtaacgattttatgtacgggaagc
caaggtgaaccgatggcggcgttatcacgcatcgctaacgggacgcaccggcagatttcc
attaatcccggagatacggtcgtcttttcttcctctccgattcccggaaacacaatcagc
gtaagccgcaccatcaaccagctgtaccgtgcgggcgcagaagtcattcacggttcattg
aatgacattcatacatccggacacggcggacaggaagagcagaaattaatgctccgcctg
atcaaaccgaagttctttatgccgattcacggtgagtacagaatgcagaaaatgcacgtc
aaactcgcgactgattgcggcatacctgaagaaaactgctttatcatggataatggcgaa
gtgctggccctcaaaggcgaagaagccgctgtggcaggcaaaattccgtccggctccgtt
tacattgacggaagcggaatcggtgatatcggcaatatcgtgctccgcgaccgccgcatt
ctttcagaagaaggccttgttatcgttgttgtcagcatcaatatggacgactttaaggtt
tcggcgggacctgatttaatctcaagaggttttgtttacatgagagaatccggtgatttg
atcaatgacgcgcagcagctcatttcgaaccatctggagaaagtaatggatcggaaaaca
acgcagtggtccgaaattaaaaacgaaattaccgatacactagctccgttcctatacgaa
aaaacaaaacgccgcccgatgatccttccgatcattatggaggtctaa

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