Bacillus velezensis JS25R: NG74_01485
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Entry
NG74_01485 CDS
T03423
Symbol
rnjA
Name
(GenBank) Ribonuclease J 1
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
bmp
Bacillus velezensis JS25R
Pathway
bmp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bmp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NG74_01485 (rnjA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bmp03019
]
NG74_01485 (rnjA)
Messenger RNA biogenesis [BR:
bmp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
NG74_01485 (rnjA)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_C
Lactamase_B
RMMBL
Lactamase_B_2
DUF5548
DUF4453
Motif
Other DBs
NCBI-ProteinID:
AIU81577
UniProt:
A0A1D9PIX2
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All DBs
Position
complement(1398995..1400662)
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AA seq
555 aa
AA seq
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MKFVKNDQTAVFALGGLGEIGKNTYGVQFQDEIVLIDAGIKFPEDELLGIDYVIPDYTYL
VKNEDKIKGLFITHGHEDHIGGIPYLLRQVNIPVYGGKLAIGLLRNKLEEHGLLRQTKLN
IIGEDDIVKFRKTSVSFFRTTHSIPDSYGIVVKTPPGNIVHTGDFKFDFTPVGEPANLTK
MAEIGKEGVLCLLSDSTNSEVPDFTMSERRVGESIHDIFRKVDGRIIFATFASNIHRLQQ
VIEAAVLNGRKVAVFGRSMESAIEIGQNLGYITCPKNTFIEHNEINRMPANKVTILCTGS
QGEPMAALSRIANGTHRQISINPGDTVVFSSSPIPGNTISVSRTINQLYRAGAEVIHGSL
NDIHTSGHGGQEEQKLMLRLIKPKFFMPIHGEYRMQKMHVKLATDCGIPEENCFIMDNGE
VLALKGEEAAVAGKIPSGSVYIDGSGIGDIGNIVLRDRRILSEEGLVIVVVSINMDDFKV
SAGPDLISRGFVYMRESGDLINDAQQLISNHLEKVMDRKTTQWSEIKNEITDTLAPFLYE
KTKRRPMILPIIMEV
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttgtgaaaaatgaccagactgccgttttcgccctcggcggattgggcgagatc
gggaaaaatacgtacggggtgcagtttcaggatgaaattgtactgattgatgcgggaatc
aagttcccggaagatgaacttctcggcattgattacgtaatccccgattacacgtattta
gtaaaaaatgaagataaaattaaaggtctgtttatcacccacggtcacgaagaccatatc
ggcggtattccgtacctgctcagacaagtaaatattcccgtttacggcggtaaactcgcg
atcggcttacttcggaataaacttgaagagcacgggctgttaagacagaccaaattaaac
atcatcggtgaagacgacatcgtgaagttccgcaagacgtctgtatccttcttcagaacg
acacacagcattccggattcatacggaatcgtcgtcaaaacaccgccgggcaatatcgta
cataccggggactttaagttcgatttcacaccggtaggcgaaccggcaaacttgacaaag
atggctgaaatcgggaaagaaggcgttctgtgcctgctttctgacagtacaaacagtgag
gttcctgatttcaccatgtcagaacgccgcgtaggcgaaagcattcacgatattttccga
aaagtggacggcagaattatatttgcgacattcgcttcaaatatacaccgtcttcagcag
gtgattgaagcagccgttttaaacggcagaaaagttgccgtattcggacgcagtatggaa
tcggctattgaaatcggacaaaatctcggttacattacctgtcctaaaaatacgtttatt
gagcataacgaaatcaatcgtatgcctgccaataaggtaacgattttatgtacgggaagc
caaggtgaaccgatggcggcgttatcacgcatcgctaacgggacgcaccggcagatttcc
attaatcccggagatacggtcgtcttttcttcctctccgattcccggaaacacaatcagc
gtaagccgcaccatcaaccagctgtaccgtgcgggcgcagaagtcattcacggttcattg
aatgacattcatacatccggacacggcggacaggaagagcagaaattaatgctccgcctg
atcaaaccgaagttctttatgccgattcacggtgagtacagaatgcagaaaatgcacgtc
aaactcgcgactgattgcggcatacctgaagaaaactgctttatcatggataatggcgaa
gtgctggccctcaaaggcgaagaagccgctgtggcaggcaaaattccgtccggctccgtt
tacattgacggaagcggaatcggtgatatcggcaatatcgtgctccgcgaccgccgcatt
ctttcagaagaaggccttgttatcgttgttgtcagcatcaatatggacgactttaaggtt
tcggcgggacctgatttaatctcaagaggttttgtttacatgagagaatccggtgatttg
atcaatgacgcgcagcagctcatttcgaaccatctggagaaagtaatggatcggaaaaca
acgcagtggtccgaaattaaaaacgaaattaccgatacactagctccgttcctatacgaa
aaaacaaaacgccgcccgatgatccttccgatcattatggaggtctaa
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