KEGG   Bacillus velezensis JS25R: NG74_01503
Entry
NG74_01503        CDS       T03423                                 
Symbol
pdhD_2
Name
(GenBank) Dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
bmp  Bacillus velezensis JS25R
Pathway
bmp00010  Glycolysis / Gluconeogenesis
bmp00020  Citrate cycle (TCA cycle)
bmp00260  Glycine, serine and threonine metabolism
bmp00280  Valine, leucine and isoleucine degradation
bmp00310  Lysine degradation
bmp00380  Tryptophan metabolism
bmp00620  Pyruvate metabolism
bmp00630  Glyoxylate and dicarboxylate metabolism
bmp00640  Propanoate metabolism
bmp00670  One carbon pool by folate
bmp00785  Lipoic acid metabolism
bmp01100  Metabolic pathways
bmp01110  Biosynthesis of secondary metabolites
bmp01120  Microbial metabolism in diverse environments
bmp01200  Carbon metabolism
bmp01210  2-Oxocarboxylic acid metabolism
bmp01240  Biosynthesis of cofactors
Module
bmp_M00009  Citrate cycle (TCA cycle, Krebs cycle)
bmp_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
bmp_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
bmp_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:bmp00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    NG74_01503 (pdhD_2)
   00020 Citrate cycle (TCA cycle)
    NG74_01503 (pdhD_2)
   00620 Pyruvate metabolism
    NG74_01503 (pdhD_2)
   00630 Glyoxylate and dicarboxylate metabolism
    NG74_01503 (pdhD_2)
   00640 Propanoate metabolism
    NG74_01503 (pdhD_2)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    NG74_01503 (pdhD_2)
   00280 Valine, leucine and isoleucine degradation
    NG74_01503 (pdhD_2)
   00310 Lysine degradation
    NG74_01503 (pdhD_2)
   00380 Tryptophan metabolism
    NG74_01503 (pdhD_2)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    NG74_01503 (pdhD_2)
   00670 One carbon pool by folate
    NG74_01503 (pdhD_2)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:bmp04147]
    NG74_01503 (pdhD_2)
Enzymes [BR:bmp01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     NG74_01503 (pdhD_2)
Exosome [BR:bmp04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   NG74_01503 (pdhD_2)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox Pyr_redox_3 GIDA FAD_binding_2 FAD_oxidored HI0933_like FAD_binding_3 NAD_binding_8 NAD_binding_9 AlaDh_PNT_C Amino_oxidase UDPG_MGDP_dh_N DAO Tox-PAAR-like Thi4 Lys_Orn_oxgnase 3HCDH_N Trp_halogenase
Other DBs
NCBI-ProteinID: AIU81595
UniProt: A0A172XI09
LinkDB
Position
1461504..1462916
AA seq 470 aa
MVVGDFPIETDTLVIGAGPGGYVAAIRAAQLGQKVTVVEKATLGGVCLNVGCIPSKALIN
AGHRYENAKHSDDMGITAENVTVDFTKVQEWKASVVNKLTGGVAGLLKGNKVDVIKGEAY
FVDSNSVRVMDENSAQTYTFKNAIIATGSRPIELPNFKYSERVLNSTGALALKEIPKKLV
VIGGGYIGTELGTAYANFGTELVILEGGDEILPGFEKQMSSLVTRRLKKKGNVEIHTSAM
AKGVEERPDGVTVTFEVKGEEKTVDADYVLITVGRRPNTDELGLEQVGIEMTDRGVIKTD
KQCRTNVPNIYAIGDIIDGPPLAHKASYEGKIAAEAISGEPAEIDYLGIPAVVFSEPELA
SVGYTEAQAKEEGIEVVAAKFPFAANGRALSLNETDGFMKLITRKEDGLVIGAQIAGASA
SDMISELSLAIEGGMTAEDIAMTIHAHPTLGEITMEAAEVAIGSPIHIVK
NT seq 1413 nt   +upstreamnt  +downstreamnt
atggtagtaggagatttccctattgaaacagatactcttgtgattggtgcgggacctggc
ggctatgtagctgccatccgcgctgctcagcttggacaaaaagtaacagtcgttgaaaaa
gcaactcttggaggcgtttgtctgaacgtcggctgtattccttcaaaagcgctcatcaat
gcaggccatcgttacgagaatgcaaaacattcagatgacatgggaatcactgctgagaac
gtaacggttgactttacaaaagtccaagaatggaaagcttctgttgtaaataagcttacc
ggcggtgttgcaggtcttttaaaaggaaataaagtggacgttataaaaggggaagcttat
ttcgtagacagcaactctgtccgcgtaatggatgagaactctgcgcaaacatacacattt
aaaaacgcaatcattgctaccggttctcgccctatcgaattgccaaacttcaaatatagc
gaacgcgttctgaactctacaggcgcacttgcgcttaaagaaattccgaaaaagctcgtt
gttatcggcggcggatatatcggtactgagcttggaacagcgtatgcgaacttcggaact
gaattggttattttagaaggcggagatgaaattcttcctggcttcgaaaaacaaatgagt
tctctcgttacccgcagactgaagaaaaaaggcaacgttgaaatccatacaagcgctatg
gctaaaggcgttgaagaaagacctgacggcgtaacagttacattcgaagtaaaaggcgaa
gaaaaaacggttgatgctgattacgtattaatcactgtcggacgccgtccgaacactgac
gagctcggccttgagcaagtcggtatcgaaatgactgaccgcggtgtcattaaaacagac
aagcagtgccgcacaaacgtaccgaacatttacgcaatcggtgacatcattgacggacct
ccattggctcacaaagcgtcttacgaaggtaaaatcgctgcggaagctatttcaggagag
ccggctgaaatcgattacctcggtattccggcggttgtattctctgagcctgaactggct
tctgtcggttacactgaagcacaggcgaaagaagaaggcattgaagtcgttgcagctaag
ttcccgtttgcagcaaacggacgtgcgctgtctcttaacgaaactgacggcttcatgaag
ctgatcacccgtaaagaagacggtcttgtaatcggtgcgcaaattgccggcgcaagcgct
tctgacatgatttctgaattgagcctggcgatcgaaggcggaatgactgctgaagatatc
gcaatgacaattcacgctcacccgacattgggcgaaatcactatggaagctgccgaagta
gcaatcggaagcccgatccatatcgtaaaataa

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