Bacillus velezensis JS25R: NG74_01657
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Entry
NG74_01657 CDS
T03423
Symbol
topA
Name
(GenBank) DNA topoisomerase 1
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
bmp
Bacillus velezensis JS25R
Brite
KEGG Orthology (KO) [BR:
bmp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bmp03032
]
NG74_01657 (topA)
03400 DNA repair and recombination proteins [BR:
bmp03400
]
NG74_01657 (topA)
Enzymes [BR:
bmp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
NG74_01657 (topA)
DNA replication proteins [BR:
bmp03032
]
Prokaryotic type
DNA Topoisomerases
NG74_01657 (topA)
DNA repair and recombination proteins [BR:
bmp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
NG74_01657 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Zn_ribbon_RPB9
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
AIU81742
LinkDB
All DBs
Position
1611287..1613362
Genome browser
AA seq
691 aa
AA seq
DB search
MSDYLVIVESPAKAKTIERYLGKKYKVKASMGHVRDLPKSQMGVDIEQNFEPKYITIRGK
GPVLKELKTAAKKAKKVYLAADPDREGEAIAWHLAHSLDLDLSSDCRVVFNEITKDAIKE
SFKHPRMINMDLVDAQQARRILDRLVGYKISPILWKKVKKGLSAGRVQSVALRLIIDREK
EINDFKPEEYWTITGSFLKGKETFEAGFFGKSGKKLPLKSEEDVKAVLAQLKGNKYTVDK
VTKKERKRNPALPFTTSTLQQEAARKLNFRAKKTMMIAQQLYEGIDLGKEGTVGLITYMR
TDSTRISNTAVEEASAFIDQAYGKEYLAGKRKPAKKNENAQDAHEAIRPTSVLRKPADLK
AVLGRDQLRLYKLIWERFVASQMAPAVLDTMSVDLSNNGLTFRANGSKVKFAGFMKVYVE
GKDDQLEEKDRMLPDLKEGDTVLSKDIEPEQHFTQPPPRYTEARLVKTLEELGIGRPSTY
APTLDTIQRRGYVGLDNKRFVPTELGQIVLDLIMEFFPEIINVEFTAKMERDLDHVEDGQ
TEWVQIIDSFYTDFEKRVKKAEAEMKEVEIEPEYADEDCELCGSRMVYKMGRYGKFMACS
NFPDCRNTKPIVKQIGVKCPKCHEGNIVERKSKKKRVFYGCDRYPECDFVSWDKPIERKC
PKCENMLVEKKLKKGIQVQCVECDYKEEPQK
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atgtctgattatctagtcatcgtggaatcgccggcaaaggcgaaaacgattgaacgttat
ttagggaagaaatataaagtcaaagcttcaatgggacatgtccgggatcttccgaaaagt
caaatgggagttgacatcgaacagaactttgaaccgaaatatattacgatccgcggaaaa
ggccctgttttaaaagaattaaaaacagcggcaaagaaagcaaaaaaagtctatctcgcg
gccgaccccgacagagaaggggaagcgattgcatggcatctcgcacacagccttgatctg
gatctcagctcggactgccgggtcgtctttaatgaaataacgaaagacgccattaaagaa
tcatttaaacatccgcgcatgattaatatggatcttgtcgatgcgcagcaggcgcgccgc
atactagacagactcgtcggatacaaaatcagcccgattctttggaaaaaagtaaaaaaa
ggcctcagtgcgggccgtgtgcaatccgttgcactccggctgatcatcgaccgggaaaag
gaaatcaacgactttaaacctgaagagtactggacgattaccggctcatttttaaaggga
aaagagacgtttgaagccggatttttcgggaaaagcggcaaaaagcttcctttaaaaagt
gaagaagacgtaaaagccgtccttgctcagctgaaagggaataagtatacagttgacaag
gttacgaaaaaagagcgcaaacgaaatcccgctctgccgtttacaacgtccactctgcag
caggaggctgccaggaagctgaatttcagagcgaagaaaacgatgatgatcgctcagcaa
ttatatgaaggaattgatctcggcaaagaagggacagtcgggctcatcacgtatatgaga
acggactcaacgcggatttccaatacagccgttgaagaagcgtcagcttttattgatcag
gcgtacggaaaagagtacttagcgggaaaacggaaaccggcaaagaaaaatgaaaatgct
caagatgcccacgaagcgatccgcccgacttcggtgctcagaaaacctgccgacttaaaa
gcggtgcttggaagagaccagctcagattatacaagctgatttgggagcgctttgttgca
agccagatggcgcctgcagtcctagatacgatgagcgtcgatctcagcaataacggattg
acattccgggcaaacggaagtaaagtcaaattcgccggcttcatgaaagtctatgtagag
ggtaaagacgatcagctggaagaaaaagaccgcatgcttccggaccttaaagagggagac
acggttttatcgaaagatattgagcctgagcagcactttactcagccgcctccgcgttat
acagaggcgcgcctggttaaaacacttgaagaactggggatcggccgtccttcgacatat
gcgccgactcttgacaccatccagcgccgcggttacgtgggattagacaataaacggttt
gtgccgactgagcttgggcagatcgtgctggatcttatcatggagtttttcccggaaatc
atcaacgttgaattcacggctaaaatggaaagagaccttgaccatgttgaagatggccag
acagaatgggttcaaatcattgacagcttctacaccgacttcgaaaaacgcgtgaaaaaa
gcggaagccgaaatgaaagaagtggaaatcgaacctgaatacgccgatgaagattgtgaa
ttatgcggctcccggatggtttataaaatgggccgatacggcaaatttatggcgtgctcc
aacttccctgactgccggaatacaaaaccgattgtcaaacaaatcggcgtaaaatgtcct
aagtgccatgaaggaaacattgtcgaacgaaaatcaaaaaagaaacgcgtcttttacggc
tgtgaccgttatcctgaatgcgacttcgtatcttgggacaaaccgattgaacgaaaatgc
ccgaaatgtgaaaatatgctcgtagagaaaaagcttaaaaaaggcatacaagtccaatgc
gtcgaatgcgattataaggaagaaccacagaagtag
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