Bacillus velezensis JS25R: NG74_01703
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Entry
NG74_01703 CDS
T03423
Symbol
polC_1
Name
(GenBank) DNA polymerase III PolC-type
KO
K03763
DNA polymerase III subunit alpha, Gram-positive type [EC:
2.7.7.7
]
Organism
bmp
Bacillus velezensis JS25R
Pathway
bmp03030
DNA replication
bmp03430
Mismatch repair
bmp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bmp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NG74_01703 (polC_1)
03430 Mismatch repair
NG74_01703 (polC_1)
03440 Homologous recombination
NG74_01703 (polC_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bmp03032
]
NG74_01703 (polC_1)
03400 DNA repair and recombination proteins [BR:
bmp03400
]
NG74_01703 (polC_1)
Enzymes [BR:
bmp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NG74_01703 (polC_1)
DNA replication proteins [BR:
bmp03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NG74_01703 (polC_1)
DNA repair and recombination proteins [BR:
bmp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NG74_01703 (polC_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
RNase_T
PHP
DNA_pol3_a_NII
DNA_pol3_finger
DNA_pol3_a_NI
HHH_6
tRNA_anti-codon
HHH_3
DEDDh_C
RNase_H_2
YhfH
Zn-ribbon_8
Motif
Other DBs
NCBI-ProteinID:
AIU81788
LinkDB
All DBs
Position
1654529..1658842
Genome browser
AA seq
1437 aa
AA seq
DB search
MEQLSVNRRQFQILLQQLNMTDDTFMTYFEDGEIDKLTIHKAEKAWHFQFRFKALLPYQI
YDSFMMRLTQSFAHIARVTSSVQVIDPTVTEELVQDYWTRCIEELEGTSPPMVALLNQQK
PKLKGNKLIVKTKTDTEASALKNKYSALIQHSYRQFGFPELQLDTEIFVSDQEVQKFREQ
KLAEDQERAMQALIEMEKKEKEGDEDQAPSGPLVIGYQIKENEEIRTLDSIMDEERRITV
QGFVFDAETRELKSGRTLCIFKITDYTNSILVKMFAREKEDAALMKTLKKGMWVKARGSI
QNDTFVRDLVMIANDVNEIKVKTREDSAPEGEKRVELHLHSPMSQMDAVTGIGKLVEQAK
KWGHEAIALTDHAVVQSFPDAYSAAKKHGIKMIYGMEANIVDDGVPIAYNPAHRLLEEDT
YVVFDVETTGLSAVYDTIIELAAVKIRGGEIIDKFEAFANPHHPLSATTIELTGITDDMV
RDAPDVVDVVRDFKEWIGDDVLVAHNASFDMGFLNVAYKRLLKTEKAKNPVIDTLELARF
LYPEFKNHRLNTLCKKFDIELTQHHRAVFDAEATGYLLLKMLKDAAEKDIFYHDQLNENM
GQSNAYQRSRPYHATLLAVNETGLKNLFKLVSISHIQYFYRVPRIPRSQLNKYREGLLIG
SACDRGEVFEGMMQKSPEEVEDIASFYDYLEVQPPEVYRHLLQLELVRDEKALKEIITNI
TKLGEKLNKPVVATGNVHYLNDEDKIYRKILISSQGGANPLNRHELPKVHFRTTDEMLEA
FSFLGAEKAKEIVVDNTQKVASMIDEIKPIKDDLYTPKIDGADEEIREMSYQRARSIYGE
ELPEIVEARIEKELKSIIGHGFAVIYLISHKLVKRSLDDGYLVGSRGSVGSSLVATLTEI
TEVNPLAPHYVCPSCRYSEFFNDGSVGSGFDLPDKTCPSCGTPLKKDGHDIPFETFLGFK
GDKVPDIDLNFSGEYQPHAHNYTKVLFGEDNVYRAGTIGTVAEKTAYGYVKGYAGDHNLH
MRGAEIDRLVQGCTGVKRTTGQHPGGIIVVPDYMDIYDFSPIQFPADATGSEWKTTHFDF
HSIHDNLLKLDILGHDDPTVIRMLQDLSGIDPKTIPTDDPEVMKIFQGTESLGVTEEQIG
CKTGTLGIPEFGTRFVRQMLEDTKPTTFSELVQISGLSHGTDVWLGNAQELIHNNTCELS
EVIGCRDDIMVYLIYQGLEPSLAFKIMEFVRKGKGLTPEWEEEMKKNNVPNWYIDSCKKI
KYMFPKAHAAAYVLMAVRIAYFKVHHALLYYAAYFTVRADDFDIDTMIKGSTAIRAVMDD
ISSKGLDASPKEKNLLTVLELALEMCERGYSFQKVDLYRSSASEFIIDGNSLIPPFNSIP
GLGTNAALNIVKAREEGEFLSKEDLQKRGKVSKTILEYLDRHGCLESLPDQNQLSLF
NT seq
4314 nt
NT seq
+upstream
nt +downstream
nt
atggaacagttatcagtaaacagaagacagtttcagattcttctgcagcagcttaatatg
acagatgataccttcatgacatactttgaagacggagagattgataaactgacaatccat
aaagcagaaaaagcctggcatttccaatttcgctttaaggctcttttgccgtatcaaata
tatgactcattcatgatgaggttaacacaatcgtttgctcacatcgcccgtgtcacatcg
tctgttcaggtcattgaccccacagtgacagaggagcttgtacaggattattggacacgc
tgtattgaagagcttgaaggaacctcgccgccgatggtggctcttttgaatcagcagaag
ccgaagctcaagggaaacaagctgatcgtgaaaacaaaaacagatacagaagcatctgcg
ctcaaaaataaatacagcgcactgattcagcacagctatcgccaattcggctttccggaa
ctgcagctggataccgaaattttcgtatctgaccaagaagtccagaaattccgcgagcaa
aagcttgctgaagatcaggagcgggcgatgcaggcgcttatcgagatggagaagaaggaa
aaagagggcgatgaggatcaggcaccgtccggaccgcttgtcatcggctatcaaattaaa
gagaacgaagaaatccggacgcttgacagcatcatggatgaagaaagaagaattacggtg
caggggtttgtgtttgatgctgaaacacgcgagctgaaaagcggacgcacgctctgcatt
ttcaaaatcacggactatacaaacagcattttagtaaaaatgttcgccagagaaaaagaa
gacgccgctttgatgaaaacgctgaaaaaaggcatgtgggtgaaggcgcggggaagcatt
caaaacgatacattcgtcagagacctcgtcatgattgcaaatgacgtgaatgaaataaaa
gtcaaaacccgtgaagactccgctcctgaaggcgaaaaacgggttgagcttcatctgcat
tctccgatgagccaaatggatgctgtaacgggcatcggaaagcttgtcgaacaggcgaaa
aaatggggacatgaagcgattgcgttaactgatcatgccgttgtgcagtctttcccggat
gcctattccgccgcgaaaaaacacggcattaaaatgatttacggaatggaagccaatatc
gtagatgacggtgttccgatcgcatacaatccagctcaccgtctcctggaagaagacaca
tacgtcgtctttgacgttgaaacgacaggtctgtccgcagtgtatgacaccatcattgag
cttgccgcagtcaaaataagaggcggagaaatcatcgataaattcgaagcgttcgccaat
ccgcaccatccgctgtcagcaacgacgatagagcttaccgggattacggacgacatggtc
cgcgacgctcccgatgtcgttgacgtcgtccgggattttaaagaatggatcggcgatgac
gtgcttgtggctcataacgccagctttgatatgggatttttaaatgtggcgtacaagcgt
cttttgaaaacggaaaaagcgaaaaatccggtcattgatacgctggaactcgcgcgtttc
ctgtatcctgagtttaaaaatcaccgcttaaatacgttatgtaagaagtttgatatcgaa
ttaacccagcatcaccgagcggtctttgacgctgaagcaacgggctacctgctgttgaaa
atgctcaaagatgccgctgaaaaagacattttttatcatgatcagctgaatgagaatatg
ggacaatccaatgcttatcaaagatcaaggccttatcacgctacattgcttgccgtaaat
gagaccggccttaaaaatctgtttaagctcgtgtccatttctcatattcaatatttctac
agagtgccgcgcattccgaggtcgcagcttaataaatacagagaaggtctgttaatcggc
tctgcctgtgacaggggagaggtctttgaaggcatgatgcaaaaatctcctgaagaggtt
gaagatatcgcatccttctatgactatcttgaagtgcagccgcccgaagtatacagacac
cttctgcagcttgagctcgtccgggacgaaaaagcgctgaaagaaatcatcaccaacatt
acgaagctcggagaaaaattgaataagccggtcgtggctacgggaaatgtccactattta
aacgatgaggataaaatttaccggaagatcttaatatcttcccaaggcggcgccaacccg
ttaaacagacacgaactgcctaaagtgcacttcagaacgacagatgaaatgctggaggct
ttctccttcctcggtgcggaaaaagcgaaagaaatcgtggttgacaatacgcagaaagtc
gcttcgatgatcgatgagatcaaaccgatcaaagacgatctgtacacgccgaaaattgac
ggggctgatgaagaaatccgtgaaatgagctatcagcgcgccagaagcatttacggtgaa
gagcttcccgaaattgtggaagcgagaatagaaaaagaattaaaaagtatcatcggtcat
ggattcgccgttatttatctcatctctcataagcttgtaaaacggtctctggatgacggt
tatctcgtcggctcccggggatccgtcggttcatcgcttgtggcgaccttaacggaaatc
actgaagtgaacccgctcgctccgcactatgtgtgcccgagctgccgatattccgaattc
tttaatgacggatcagtcggttccggttttgaccttccggataaaacctgcccgtcttgc
ggcacgcctttgaaaaaggacggacatgatatcccgtttgaaacgttcttaggctttaaa
ggtgacaaagtacccgatatcgacttgaacttctcaggtgagtatcagccgcatgcccat
aactacacgaaagtattgttcggtgaagataacgtgtatcgcgcgggaacgatcggcacc
gtcgcggaaaagacggcttacggatatgtgaaaggctatgcgggcgatcacaacctacac
atgcgcggcgcggagatcgaccgtctggtgcaaggctgcaccggcgttaagagaacgacc
ggccagcacccgggggggattatcgttgtcccggattacatggatatttacgatttttca
ccgatacaattcccggcagatgcgacggggtctgaatggaaaacgactcattttgacttc
cactccattcatgacaacctgctgaagcttgatatattggggcacgatgatccgacagtc
atccggatgcttcaggatttaagcggaattgatccgaagacgattccgacagatgatccg
gaagtgatgaagattttccaaggtacagaatcgctaggcgtcactgaagagcagatcggc
tgtaaaacggggacgctcggcattcctgaattcgggacgcgatttgtgcggcagatgctt
gaggatacgaagccgacgacgttctccgagcttgtccagatttccgggctttcccacgga
acggacgtatggctcggcaatgcgcaggaactgatacacaacaatacgtgtgaactgagc
gaagtgatcggctgccgtgatgacattatggtttacttgatctatcagggccttgagcct
tcactggcctttaaaatcatggaattcgtccgtaaaggcaaaggcctgacgccggaatgg
gaagaagaaatgaaaaagaacaacgtgccgaactggtatattgattcatgcaaaaaaatc
aaatacatgttcccgaaagcccacgccgccgcatacgtgctgatggcggtgcggattgca
tactttaaagtgcatcacgcgcttttatattatgctgcgtattttaccgtccgcgcagat
gactttgacattgatacaatgattaaaggctcgaccgctatcagagcggtgatggatgat
atcagctctaaagggcttgatgcttcgccgaaggagaaaaacctccttaccgtgttagag
cttgctcttgaaatgtgtgagcgcggctattccttccagaaggtcgatctataccgttcg
agcgcttcggaatttatcattgacggcaacagtctcatcccgccgttcaactcaattccg
ggactcggaaccaacgccgctctcaatattgtgaaagcgcgggaagaaggggagttcctt
tcaaaagaagatcttcaaaaacgcggaaaagtgtcaaaaaccattttagagtatttagac
cgtcacggctgtcttgagtcccttccggaccaaaatcagctgtctctgttttaa
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