Bacillus velezensis JS25R: NG74_03802
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Entry
NG74_03802 CDS
T03423
Symbol
dbpA_2
Name
(GenBank) ATP-dependent RNA helicase DbpA
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
bmp
Bacillus velezensis JS25R
Pathway
bmp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bmp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NG74_03802 (dbpA_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bmp03019
]
NG74_03802 (dbpA_2)
03009 Ribosome biogenesis [BR:
bmp03009
]
NG74_03802 (dbpA_2)
Enzymes [BR:
bmp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
NG74_03802 (dbpA_2)
Messenger RNA biogenesis [BR:
bmp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
NG74_03802 (dbpA_2)
Ribosome biogenesis [BR:
bmp03009
]
Prokaryotic type
rRNA helicases
NG74_03802 (dbpA_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
AAA_19
CMS1
UvrD-helicase
NAT10_TcmA_helicase
Flavi_DEAD
3H
Motif
Other DBs
NCBI-ProteinID:
AIU83804
LinkDB
All DBs
Position
complement(3811481..3812920)
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AA seq
479 aa
AA seq
DB search
MNEFNEYAISPEIRRALNGLQYTEPTEVQRRVIPAALQKKDLVVKSQTGSGKTAAFGIPI
CELAEWEENKPQALILTPTRELAAQIKEDITNIGRFKRIKATAVFGKASFDKQKTELKQK
SHVVAGTPGRVLDHIEKGTLPLERLAYVVIDEADEMLNMGFIEQVEAIIQHLPKNRVTML
FSATLPDDVEKLSRTYMKDPELIEVKAEGLTTKDIEHFVTRTEEEDKTSLLRDVLITENP
DSCIIFCRTKERVIQLTDELDRLGYPCDKIHGGMVQEDRFDVMNEFKRGEFRYLIATDVA
ARGIDIENISLVINYDIPLEKESYVHRTGRTGRAGHRGRAVTFVTPSESRFLNDIETYIG
FRIQKREAPSEKETAERKAAFAEKLNARPDVKTDKSEQLNKDIMKLYFNGGKKKKLRAVD
FVGTIAKIDGVSADDIGIITILDNASYVEILNGKGPHVLDIMKNTTVKGKKLKVHKAKK
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atgaatgagtttaatgaatatgcgatcagccccgagatccgacgggcgctgaatggcttg
caatacacggagccgactgaagtgcagcggcgcgtcatccccgccgcgctgcaaaaaaaa
gacctcgtcgtcaaatcacagacgggcagcggcaaaaccgcggctttcggcattccgatc
tgtgagcttgcggaatgggaggaaaacaaaccgcaggcgctgattttaacgccgacccgc
gagcttgcggcgcagattaaagaagatatcacgaatatcggccgtttcaaacggataaaa
gccacggcggttttcggaaaagcttcttttgacaaacagaaaaccgaactgaagcaaaaa
agccacgtcgttgccggaacgccggggcgtgtgcttgatcatatagagaaagggacgctg
ccgcttgaacggctggcgtatgtagtgattgacgaagcggatgaaatgctgaatatggga
tttattgaacaggtggaagccatcattcagcatctgccgaaaaacagagtcaccatgctg
ttttcagcgacgctgccggatgacgtcgagaagctgagccgcacatatatgaaagaccct
gaattgattgaagtaaaagcggaaggcctgacgacaaaagacattgagcattttgtcacc
agaacagaagaagaggacaaaacatctttgctgcgtgatgtcctgatcaccgaaaacccg
gacagctgcatcatattctgccggacaaaagaaagagtcatccagttaaccgatgaactg
gacaggctgggctacccttgcgataaaattcacggcggcatggtgcaggaagaccgtttt
gacgtcatgaatgaattcaagcgcggcgagttccgctatctcattgcgaccgacgttgcc
gccagaggaattgatattgaaaacatcagcctcgtcatcaattatgatattccgcttgaa
aaagaaagctatgtgcaccgcaccggcagaacgggacgcgccggacaccgcggacgggcc
gttacgtttgtgacgccgtctgaatcgcggtttctgaatgacattgagacatatatcggt
ttccgcatccagaagcgggaggcgccgtctgagaaagaaacagcggaacggaaagcggct
tttgcggaaaaactgaacgcccgccccgatgtcaaaacagacaaaagcgaacagttaaac
aaagacatcatgaagctgtactttaacggcgggaaaaagaaaaaactcagagcggtcgat
tttgtcggaacgattgcgaaaatcgacggcgtttcagccgatgatatcgggattatcacg
attttggacaacgcatcgtacgtcgaaattctgaacggcaaaggcccgcacgttcttgac
atcatgaaaaatacgacggtcaaaggcaaaaaactgaaagtccataaagccaagaaataa
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