Priestia megaterium QM B1551: BMQ_0074
Help
Entry
BMQ_0074 CDS
T01208
Symbol
mfd
Name
(GenBank) transcription-repair coupling factor
KO
K03723
transcription-repair coupling factor (superfamily II helicase) [EC:
5.6.2.4
]
Organism
bmq
Priestia megaterium QM B1551
Pathway
bmq03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
bmq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BMQ_0074 (mfd)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bmq03400
]
BMQ_0074 (mfd)
Enzymes [BR:
bmq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BMQ_0074 (mfd)
DNA repair and recombination proteins [BR:
bmq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
TRCF (transcription-repair coupling factor)
BMQ_0074 (mfd)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
DEAD
TRCF
CarD_TRCF_RID
Helicase_C
ResIII
Cas3-like_C_2
RecG_dom3_C
MFD_D3
UB2H
Motif
Other DBs
NCBI-ProteinID:
ADE67192
UniProt:
D5DVM7
LinkDB
All DBs
Position
62248..65778
Genome browser
AA seq
1176 aa
AA seq
DB search
MRGIRQQFEENKEIGAVVSSLEEGLKEQLVTGISGSARSVLMALLNEDKKYPLLVVTHNL
YQAQKVYEDLLHLLPEKDVFLYPVNDLVATEVGIASPELKAQRIEVLNYWSQHTGGVVVT
PLAGIRKLLPPKARWEQTQLPFQMGIDIDVDHYLKRLVELGYERASMVSAPGEFSVRGGI
IDIYPLTEELPVRIELFDTEIDSIRTFTIEDQRSQEQLKEISIGPATEIIVNRNEVAQGI
EELEAQLASTLQQVKNAALKATLTENIKGEIEQLRQGQLLENMFKYLSFFYESPASLLDY
LPEGGLVIFDETTRIQETSDQLETEEAEWITELLGQGQIVRDVQLSHKLPSLIQRAKHQF
LYLSLFLKHVSYTSPQNIINISCKQMQQFYGQMNLLKNEIERWKNANYTVVLLGADKERV
KKLEGVLADYDIDSSILDGNGQLVPGLVQIIEGDLQMGFELPMQKLAVLTEEELFKKRVK
KSKRRQKLSNAERIKSYSELNVGDYVVHVNHGIGRYLGMETLEINGNHKDYIHIKYEGSD
KLYVPVEQIDQVQKYVGSEGKEPKVYKLGGNDWKKVKRKVESSVQDIADDLIKLYAEREA
SKGYAFSPDGDLQREFETAFPYQETEDQLRSVQEIKKDMEHERPMDRLLCGDVGYGKTEV
AIRAAFKAVTDGKQVAILVPTTILAQQHYETIRERFQDYPINIGLLSRFRSRKQQQETIK
GLKNGTVDVVIGTHRLLSKDVIYKDLGLLVIDEEQRFGVTHKEKIKQMKANVDVLTLTAT
PIPRTLHMSMLGVRDLSVIETPPENRFPVQTYVVEYNPVLVREAIERELARDGQVYFLYN
RVEDIERKAEEISMLVPDARVTYAHGKMNETELEAVILSFLEGEYDVIVSTTIIETGVDI
PNVNTLIVNNADKMGLSQLYQLRGRVGRSNRVAYAYFTYHKDKVLTEVAEKRLQAIKEFT
ELGSGFKIAMRDLSIRGAGNLLGAQQHGFIDSVGFDLYSQMLKEAIEERRGSDGESVKFN
VEMNLDLDAYIPDQYITDGRLKIEMYKRFRGIEGLEDIQELQDEMIDRFGEYPAEVEYLF
KVAETKVYATQNLVESILQSKQEISILLSEEASSTVDGQKLFMLGDQFGRMVSLGMEGKK
VKLVVNVKGLAQKEWLNIVYQLVKGVATVKKEQVTN
NT seq
3531 nt
NT seq
+upstream
nt +downstream
nt
ttgcgagggattagacagcaatttgaagaaaataaagaaattggagctgttgtcagcagt
ttagaagaaggtttgaaagaacagttagtaacgggaatttccggttcagctcgatctgta
ttaatggcactcttaaatgaggataaaaaataccccttattagtagtgactcataattta
tatcaagctcaaaaagtgtatgaagaccttttgcatcttttaccggaaaaagacgttttc
ttataccctgttaacgatttagttgctacagaagtggggattgcaagtccagaattaaag
gctcagcgaattgaagtactcaattattggagtcaacatacaggtggagtagttgtaaca
ccgcttgcaggaattcgaaagctgctgcctcctaaagcaagatgggagcaaacgcagctg
ccgtttcaaatgggaattgacatcgacgttgatcattatttaaaaaggttagttgagttg
ggttatgagcgggcatcgatggtttcagctccgggtgagtttagtgtgcgcggaggaatc
attgacatttatccgttaacagaagagctacctgtccgaattgaactatttgatacggag
attgattccattcgtacttttacaatcgaggatcaacgctctcaagagcagttaaaagaa
atttcaatcggccctgctacggaaatcattgtgaaccgaaatgaagtggcccaaggaatt
gaagaactagaagcacagctggcttcgacgctgcaacaagtgaaaaacgcagcgctaaaa
gctaccttaacagaaaatattaaaggtgaaattgaacagctgcgtcaaggtcaacttctt
gaaaatatgttcaagtatttatcattcttctacgaatcgcctgctagtttactagattat
ttaccagaaggcggccttgtcatctttgatgagacaactcgaattcaagaaacgtctgat
cagcttgaaacagaggaagctgaatggataacagaattattaggacaggggcaaattgtt
cgagacgttcaattatctcataagctcccatctcttattcagcgagcaaaacatcagttt
ttatacttatcgttatttttgaagcacgtatcgtatacgagtccgcaaaatattattaat
atttcatgtaagcagatgcagcagttttacggccaaatgaacttattaaaaaatgaaatt
gaacgttggaaaaatgctaattatacggtagtcctcttaggagcagataaagagcgcgtg
aaaaaactcgaaggtgtgctagcagattatgatattgattcatctattttagatggaaat
ggtcagcttgtgccaggtcttgttcaaattattgaaggcgatttacaaatgggctttgaa
ctgccgatgcaaaaattagctgttttaaccgaggaagaattgtttaaaaaacgggtaaag
aaatcaaagcgtcgtcaaaagctttccaatgcagagcgtattaaaagctattcagagtta
aacgtaggtgactatgtcgttcacgtgaaccacggtattggccgttatttaggaatggaa
acgttagagattaacggtaatcataaagattatatccatatcaaatatgaaggctctgac
aagctgtacgttcctgttgaacagattgatcaagtacaaaaatatgtaggctctgaaggg
aaagagccaaaagtatataaacttggcggaaatgattggaagaaagtgaaacgaaaagtt
gagtcttctgttcaagacatcgctgatgacttaattaaactgtatgcagagcgtgaagca
agtaaaggttatgcattttccccagatggcgatttacagagagaatttgaaacagctttc
ccttatcaagaaaccgaagatcagcttcgttctgtacaagaaattaaaaaggatatggaa
catgaaagaccaatggatcgtctgctttgtggagacgttggatatggaaaaacagaagta
gccattcgtgctgcgtttaaagctgtgacagatggaaaacaagtggctattttagtgcca
accactattttagctcagcagcactatgaaaccatccgtgagcgttttcaagactatcca
atcaacattgggctattgagccgctttcgcagccgtaaacagcagcaagaaacaattaaa
gggctaaaaaacgggaccgtagatgtagtgattggtacacatcgtttactatctaaagac
gtgatttataaagatttaggattgttagttatcgatgaagagcagcgttttggtgtaacg
cacaaggaaaaaatcaagcaaatgaaagcaaacgttgatgtccttacactcacagcaaca
cctattccacgaacattacatatgtctatgttgggcgtaagggatttgtctgttattgaa
acgccgcctgaaaatcgttttccggttcaaacatatgtagtggagtataatccggtttta
gttcgtgaagcgattgagcgtgagttagcgcgtgatggccaagtttactttttatataat
cgcgtagaagatattgaacgaaaagcagaagaaatttcgatgctcgtgcctgatgctagg
gtaacgtatgcccacggaaaaatgaatgaaaccgaactcgaagcggttatcttaagcttt
ttagaaggcgaatatgacgtgattgtgagtacaaccattatcgaaacaggagtagatatt
cccaatgtaaatacgcttattgttaataatgctgataagatgggattatcacaactgtat
caattaagagggcgtgtaggtcgttcaaatcgcgtggcatatgcgtactttacgtatcac
aaagacaaagtactgacagaagtagctgaaaagcgtctgcaagctattaaagaattcacc
gaattaggttctggttttaaaattgctatgcgtgatctttcaatacgtggtgccggaaac
ttactgggtgctcagcagcatggatttatcgattctgtcggtttcgatctctactcacaa
atgcttaaagaagcgatagaggaaagacgcgggtctgacggagaaagtgtaaaatttaat
gtggaaatgaatctagatttagacgcgtatattcctgatcagtacattacagacggccgc
ttgaaaattgagatgtataagcgctttagaggaattgaaggactagaggatattcaagaa
ttgcaggatgaaatgattgatcgttttggagagtatccggctgaggttgagtatttgttt
aaagtagctgaaacaaaagtatatgcaacgcagaacttagtagaatctattcttcagtca
aaacaagaaatttctattctgctgtctgaagaagcgagctcaacggtagacggccaaaaa
ttattcatgctaggtgatcaatttggcagaatggtcagcttaggtatggaaggcaagaaa
gtaaaattagtggttaatgtaaaaggacttgctcaaaaagaatggctcaatattgtgtat
cagttagtaaaaggagtagccactgttaaaaaagaacaagttaccaattaa
DBGET
integrated database retrieval system
