Priestia megaterium QM B1551: BMQ_0129
Help
Entry
BMQ_0129 CDS
T01208
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase, beta' subunit
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
bmq
Priestia megaterium QM B1551
Pathway
bmq03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bmq00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
BMQ_0129 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bmq03021
]
BMQ_0129 (rpoC)
03400 DNA repair and recombination proteins [BR:
bmq03400
]
BMQ_0129 (rpoC)
Enzymes [BR:
bmq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
BMQ_0129 (rpoC)
Transcription machinery [BR:
bmq03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
BMQ_0129 (rpoC)
DNA repair and recombination proteins [BR:
bmq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
BMQ_0129 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_3
RNA_pol_Rpb1_2
RNA_pol_Rpb1_4
Apocytochr_F_C
Motif
Other DBs
NCBI-ProteinID:
ADE67242
UniProt:
D5DVS7
LinkDB
All DBs
Position
119519..123112
Genome browser
AA seq
1197 aa
AA seq
DB search
MLDVNNFEYMKIGLASPDKIRSWSYGEVKKPETINYRTLKPEKDGLFCERIFGPQKDWEC
HCGKYKRVRYKGVVCDRCGVEVTRAKVRRERMGHIELAAPVSHIWYFKGIPSRMGLVLDM
SPRALEEIIYFASYVVTDAGDTPLEKKQLLSEKEYRAYREKYGQTFHAAMGAEAVKKLLH
DIDLDKEVDALKEELKTAQGQRRTRAIKRLEVLEAFRHSGNEPSWMILDVLPVIPPELRP
MVQLDGGRFATSDLNDLYRRVINRNNRLKRLLDLGAPSIIVQNEKRMLQEAVDALIDNGR
RGRPVTGPGNRPLKSLSHMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPNLKMYQCGLPKE
MALELFKPFVMKELVERGLAHNIKSAKRKIERVQPEVWDVLESVIKEHPVLLNRAPTLHR
LGIQAFEPTLVEGRAIRLHPLVCTAYNADFDGDQMAVHVPLSAEAQAEARILMLAAQNIL
NPKDGKPVVTPSQDMVLGNYYLTLEREEAVGEGMVFKDTNEALLAYQNGYVHLHTRVAVY
AGSLNNETFTEAQNQQLLVTTVGKLVFNEILPKSFPYINEPTRENLEVKTPEKYFVEKGA
DVKEFIKNQPAIAPFKKKILGNIIAEVFKRFKITETSKMLDRMKDLGFKYSTKAGITVGV
ADIVVLGEKEVILTEAQAKVDNVLKQFRRGLITEDERYDRVISVWSSAKDVIQGKLMASL
DKRNPIFMMSDSGARGNASNFTQLAGMRGLMANPSGRIIELPIKSSFREGLTVLEYFIST
HGARKGLADTALKTADSGYLTRRLVDVAQDVIVRDDDCGTDRGILAVAIKEGTEEIEKLD
ERLIGRYARKTVLHPGTNEVLVKENELITEDLAETIVDAGVEEVWIRSAFTCNTRHGVCK
KCYGRNLATGSEVEVGEAVGIIAAQSIGEPGTQLTMRTFHTGGVAGDDITQGLPRIQEIF
EARNPKGQAVISEIEGTIAGISEGRDRQHEITVQGEIETRSYTAPYSARLKVIEGQRIAR
GQELTEGSIDPKELLKVKDITAVQEYLLREVQKVYRMQGVEIGDKHVEVMVRQMLRKVRV
MDSGDTDVLPGSLLDIHQFTDANEKVLLEGNRPATGRPVLLGITKASLETDSFLSAASFQ
ETTRVLTDAAIKGKRDELLGLKENVIIGKLVPAGTGMTRYRNAEPIKNQAEETVTID
NT seq
3594 nt
NT seq
+upstream
nt +downstream
nt
ttgctagatgtaaataactttgagtatatgaaaatcggtctagcttcgccagataaaatt
cgttcttggtcgtacggtgaggtaaaaaaacctgaaacgatcaactatcgtacgttaaaa
cctgaaaaagacggcttattctgtgagcgtatttttggtccacaaaaggactgggaatgt
cactgcggaaaatataagcgcgttcgttataaaggtgttgtatgtgatcgttgtggcgta
gaagttacgcgcgcaaaagttcgtcgtgaacgcatgggtcacatcgagctagctgcacct
gtttctcatatttggtactttaaaggtattcctagccgcatgggacttgtcttagacatg
tcccctcgtgcgctagaggaaatcatttattttgcttcttatgtagtaacagatgctggt
gatacaccacttgaaaagaaacagcttttatcagagaaagaataccgtgcgtatcgtgag
aagtacggacaaactttccatgcagcaatgggtgctgaagctgttaaaaaattattgcat
gacatcgatcttgataaagaagtagatgctttgaaagaagaattgaaaactgctcaaggt
caacgtcgtacacgtgctattaaacgtttagaagtactagaggctttccgtcattctggt
aacgaaccttcttggatgattttagacgttctaccggttattccgccagaacttcgtcca
atggttcaattagatggtggacgctttgctacgtctgatctaaatgatttatatcgccgt
gtaattaaccgtaacaaccgcttaaagcgtttattagaccttggagctcctagcattatc
gttcaaaacgaaaagcgtatgcttcaagaagctgtagatgcattaatcgataatggtcgt
cgcggccgtccggtaacaggaccaggtaaccgtccattaaaatctctttctcacatgtta
aaaggtaagcaaggtcgcttccgtcaaaacttattaggtaaacgtgttgactactctggc
cgttcggtaatcgttgtaggtccgaacttaaagatgtatcaatgtggtcttccaaaagaa
atggcgttagagcttttcaaacctttcgtaatgaaagagcttgttgaacgcggtttagct
cataacatcaagagtgcaaaacgtaaaattgaacgtgtgcaacctgaagtatgggacgta
ttagaatcggttattaaagagcatccagttcttttaaaccgtgcaccaacgctacacaga
ctaggtattcaagcgtttgaacctacgcttgtagaaggtcgcgctatccgtcttcacccg
cttgtatgtacagcatataacgctgactttgacggtgaccaaatggcggttcacgttcca
ttatctgcagaagcacaagcagaagcacgtatcttaatgcttgctgctcaaaatatcttg
aaccctaaagatggtaaaccagttgttacaccttcacaggatatggtattaggtaactac
tacttaacacttgagcgtgaagaggcagttggagaaggtatggtgttcaaagataccaac
gaagcactattagcgtaccaaaacggttatgtgcatcttcatacacgtgtagctgtgtat
gcaggttctttaaacaacgaaacgtttacagaagcacaaaatcaacaattgcttgttaca
acggttggtaaattagttttcaacgaaattttaccaaaatcgttcccatacattaacgaa
ccaacaagagaaaacttagaagtgaaaactcctgagaagtactttgttgaaaaaggtgca
gatgtgaaggaattcatcaagaatcaaccggctatcgcaccgttcaagaaaaaaatctta
ggtaatatcatcgctgaagtatttaaacgtttcaaaattactgagacttctaaaatgctt
gaccgtatgaaagacctaggtttcaaatattctactaaagctggtattacagttggtgta
gctgatatcgtggttttaggagaaaaagaagttatcttaacagaagcgcaagctaaagta
gataacgtactaaaacaattccgtcgcggtttaattactgaagatgagcgttatgatcgt
gttatctctgtatggagcagtgcgaaagacgttatccaaggtaaattaatggcatcatta
gacaaacgcaacccaatcttcatgatgagtgactctggtgcccgtggtaacgcatctaac
ttcactcagcttgcaggtatgcgtggactaatggccaacccgtctggtcgtatcattgag
ttaccaatcaaatctagtttccgtgaaggtttaacagtattagagtactttatctctacc
catggtgcacgtaaaggtcttgccgatacggctcttaaaacagctgactcaggttacctt
actcgtcgtctggttgacgtggcacaagacgttatcgtacgtgatgacgactgtggtaca
gaccgcggtattttggctgttgcaatcaaagaaggaacagaagaaattgagaaacttgat
gagcgtctaattggacgttatgcaagaaaaacagtacttcacccaggaacaaacgaagtg
ttagtgaaagaaaacgaactaattacagaagacctagctgaaacaattgtggatgctggt
gttgaagaagtatggattcgttctgcattcacttgtaacactcgccacggtgtatgtaaa
aaatgttacggtcgtaaccttgcaactggttcagaagttgaagtgggtgaagcagttggt
atcatcgctgctcaatctatcggtgagccaggtacacagttaacgatgcgtacattccat
acaggtggggttgctggagacgatatcactcaaggtttaccgcgtatccaagagatcttc
gaagcgcgtaaccctaaaggtcaagccgttatttctgaaattgaaggtacaattgccggc
atttctgaaggacgcgatcgtcaacatgaaattactgttcaaggagagattgaaactcgt
tcttacacagctccgtacagtgcacgtctgaaagttattgaaggacagcgcattgcacgt
ggtcaagaattaacagaaggttcaattgatcctaaagaattactaaaagtaaaagacatc
acggctgtacaagagtacttgcttcgtgaggtgcaaaaagtataccgtatgcaaggggta
gaaattggagataaacacgtagaggtaatggttcgccaaatgcttcgtaaagtgcgcgta
atggattcaggagatacagatgtattaccaggttcattacttgatattcaccaattcact
gatgcaaatgaaaaagtattacttgaaggcaatcgtccagcgacaggccgtcctgtatta
cttggtattacaaaagcatctcttgaaactgattccttcttatctgctgcatcattccaa
gaaacaacgcgtgttcttacggatgctgcaatcaaaggaaaacgtgatgagttgcttgga
cttaaagagaatgttatcattggtaagctagttccggctggtacaggtatgacgagatat
cgtaatgctgaaccgatcaaaaaccaagctgaagaaacggtaacaatcgactaa
DBGET
integrated database retrieval system
