Priestia megaterium QM B1551: BMQ_0221
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Entry
BMQ_0221 CDS
T01208
Name
(GenBank) ATP-dependent RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
bmq
Priestia megaterium QM B1551
Pathway
bmq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bmq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BMQ_0221
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bmq03019
]
BMQ_0221
03009 Ribosome biogenesis [BR:
bmq03009
]
BMQ_0221
Enzymes [BR:
bmq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
BMQ_0221
Messenger RNA biogenesis [BR:
bmq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
BMQ_0221
Ribosome biogenesis [BR:
bmq03009
]
Prokaryotic type
rRNA helicases
BMQ_0221
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
CMS1
Motif
Other DBs
NCBI-ProteinID:
ADE67322
UniProt:
D5DWS7
LinkDB
All DBs
Position
195419..196930
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AA seq
503 aa
AA seq
DB search
MALFQDLGLSQQLNKAVSKMGFEEATPIQSETIPLALEGHDLIGQAQTGTGKTAAFGIPL
IEKVDVNVDAIQGLIIAPTRELAVQVSEELYKIGQTKRVRVLSIYGGQDISRQIRALKKH
PHIIVGTPGRMLDHINRRTLRLQDVHTVILDEADEMLNMGFIEDIEKILSNVPENHQTLL
FSATMPTPIRRIAEKFMNEPKVVKVKAKEVTMPNITQYYLEVQEKRKFDILTRLLDMQSP
ELAIIFGRTKRRVDELSEALNMRGYSAQGIHGDLTQSKRLSVLRQFKEGSIDVLVATDVA
ARGLDISGVTHVYNFDIPQDPESYVHRIGRTGRAGKMGAAMTFVTPRETGQLHNIERTTK
RKMERLTPPTLDEAMEGQQRIAADKLTESVTQGNLSYYKQLAEELLEEHDSVSLVAAAIK
LFTKEPNESPIQLTAEPPVIAKGDKNKRGNGGGRSRSNSKNYSQQNRRGNSKRFGDKRRG
GSNGSDNRNRNSSSNRKDSRSKA
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
ttggcattatttcaagatttaggattaagtcaacagcttaataaagctgtgagtaaaatg
ggttttgaagaagcaacaccaattcaatcagaaactatcccattagcactagaaggtcac
gatttgatcggacaagcacaaacaggaacagggaaaacagcggcatttggtattcctctt
attgaaaaagttgatgtaaacgtagatgcaattcaagggttaattattgctcctactcgt
gaacttgctgtacaggtatctgaagaactttacaaaattggtcaaacaaagcgcgtacgc
gtgctatcaatttacggtggtcaagatatcagtcgtcaaattcgtgcattgaaaaagcac
cctcatatcatcgtagggacaccagggcgtatgctagatcatattaatcgtcgtacactt
cgtctacaagatgttcatacagttattttagatgaagcagatgaaatgttaaacatggga
ttcatcgaagacattgaaaaaatcttatcaaacgtacctgagaaccaccaaacactttta
ttctcagcaacaatgcctactccaatccgtcgcattgctgaaaaattcatgaacgaacca
aaagtggtaaaagtaaaagcaaaagaagtaacgatgccaaacattacgcagtattattta
gaagtacaagaaaagcgtaaatttgatatccttactcgtcttttagatatgcaatcacct
gaattagctatcatctttggtcgtacaaagcgccgtgttgatgagttatcagaagcatta
aatatgcgtggttattctgcacaaggtatccacggtgacttgacgcaatcgaaacgtcta
tctgtactacgtcaatttaaagaaggttctattgatgtattagttgcgacggacgtagct
gcacgcggacttgatatttctggtgttactcatgtatacaactttgatatccctcaagat
ccagagagctatgtacaccgtatcggacgtacaggacgtgctggtaaaatgggtgctgct
atgacatttgtaacgccaagagaaactggacagttacacaatattgagcgtacaacaaaa
cgtaaaatggagcgtcttactcctccaacgcttgatgaagcaatggaaggtcaacagcgt
attgcagctgacaaattaacagaatctgtgacacaaggcaacttatcttactacaaacag
ttggcagaagagttacttgaagagcacgattcagtttcattagtggcagcagcaatcaaa
ttatttacaaaagaaccaaacgaatcaccaattcaattaactgctgaaccaccggtaatt
gcaaaaggtgataaaaacaaacgtggaaatggcggaggtcgttcacgttctaactctaaa
aactactcacagcaaaatcgtcgtggaaactcaaagcgttttggtgacaagcgtcgcggt
ggaagcaacggcagtgataatagaaatcgtaatagcagcagtaatcgtaaagattctcgc
agcaaagcgtaa
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