Priestia megaterium QM B1551: BMQ_0642
Help
Entry
BMQ_0642 CDS
T01208
Symbol
sbcC
Name
(GenBank) nuclease SbcCD, C subunit
KO
K03546
DNA repair protein SbcC/Rad50
Organism
bmq
Priestia megaterium QM B1551
Brite
KEGG Orthology (KO) [BR:
bmq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bmq03400
]
BMQ_0642 (sbcC)
DNA repair and recombination proteins [BR:
bmq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
BMQ_0642 (sbcC)
Archaeal homologous recombinant proteins
BMQ_0642 (sbcC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_29
SMC_N
AAA_21
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
ADE67676
UniProt:
D5DZV6
LinkDB
All DBs
Position
599481..602873
Genome browser
AA seq
1130 aa
AA seq
DB search
MKPINLTVSGLHSFREKQTVDFEALCSGGVFGIFGPTGSGKSSILDAITLALYGKVERAA
NNTQGILNHGENELKVSFTFELENANHKKRYTVERSFKRTDELRVKSASSRLIEIEDETY
VLADKTNDVNQQVQELLGLTIDDFTRAVVLPQGKFAEFLSLKGTERRQMLQRLFNLEQYG
DQLSKKIRYQVQQLKTDLDKITAEQTGLGEASTEKVTEAEQLVSDSIVLLEKREKEASDL
QERYDQQASLWKAQQEKALIEEKLVHASKQEEEIRQKQDVLTKAQQAERLFPYLETFEQA
EKQQKLYEDKVEKLKAQIVQKSEEYKRSNSLYEQARLQKNEQQPKLVVQKEQLQQASDLQ
KQIKEGQQEIKEGEVSLQQKQQALQAKNDELMEADKRYQQGLTLQKELKEALTKVEIQPD
YRQAVQQAFYRYQVWNNDKKNLDEGQKTYKEKAEQLKHLHTQKQTHQERYQQTVEQSKGL
FSDIQGLYHTVCEREKEFQQLFQQADRLMSDLKRRKEKEWSRRLAHQLAEQLTQGEPCPV
CGSEHHPNPVLHQQEDDITTESADQFEDQVNQLREQRFSYSSLKMQLEQLAKPLVEKIPE
LAEFMNEAGEVPALGEMDTDAFGHYAKKIEVEIKSLEQDYLQVSEKQQAILGQMQKVQQS
LEKIELELAHYQKEQAELEGKVNQQKQALQAGKEAFQQDYPSFVFEEMEKINKRLTEREK
EEQTIKARIEKSSLFFENQQKKIERLKEEKYAGEKEFTELKAMLSHKQSLVHSQIERLRT
LTDQEDIEQALQKTVLLLAELETNEQQAYQHWQTVQKAYQTLQMDEKAASESLETAHMQY
KKAAEKWEEAIGNSLFSEGKEVQQALLSHDEMKLLDETVQAYWDNIKQMKSSIEQLNIQL
NHQSIEEQQFEETQQLLHDIKAAVKEAVQLKGAAEQTLKSVKERHERFLVLEQDREEKQA
LFEQYQKLQTVFKGNAFVEYIAEEQLMSVSRDASERLGILTRQRYAIEVDSQGGFIMRDD
ANGGVKRPVSTLSGGETFLTSLALALSLSAQIQLRGEYPLQFFFLDEGFGTLDGELLDTV
VTALEKLQSNNLSIGVISHVQELRARLPKRLIVEPSEPSGKGTSVRVETL
NT seq
3393 nt
NT seq
+upstream
nt +downstream
nt
atgaaacctattaacttgaccgtttcggggcttcacagttttagagaaaaacaaactgtc
gattttgaagcgctgtgttcaggcggtgtgtttggaatatttggtcctacaggaagcggg
aaatcttccattttggatgccattacactagctttatacggaaaagtagagcgtgcagcc
aataatacacaaggaattttaaatcacggggaaaatgaactgaaagtatcgtttacgttc
gagctggaaaacgctaatcataaaaaacgctatactgttgaacgaagctttaaacggacg
gatgagcttcgtgtaaaatcagcttcaagtcgattgattgaaatcgaagatgaaacgtac
gtattagcagataaaacaaatgatgtaaaccagcaggtacaggagcttcttggtttaaca
attgatgattttacaagagctgttgtattaccgcaaggaaaatttgcggagtttttatcg
ttaaaaggaacggagcgtcgtcaaatgctgcagcgtctttttaatctcgagcagtacgga
gatcagcttagtaagaaaatacgctatcaagttcagcagctaaagacagacctagataaa
atcacggcagaacaaacgggattaggtgaagcttcaacagagaaagtaacggaagcggag
cagcttgtaagtgatagcattgtacttttggaaaaacgagaaaaagaagcgtctgatttg
caggaaagatacgatcagcaggcgtctctttggaaagcgcagcaggaaaaagcactgata
gaagaaaaactagtgcatgcttctaagcaggaagaggagattagacaaaagcaagatgtg
ctgacgaaagctcagcaggcagaacgtctttttccctatttagaaacatttgaacaagct
gaaaaacagcaaaagctttacgaagataaagtagaaaaattaaaagcacaaattgttcaa
aaaagtgaggaatataagcgatcgaatagtttatatgagcaggctcgcttacaaaaaaat
gaacagcagcccaaattagttgttcaaaaagaacagcttcaacaagcatctgatcttcaa
aaacaaattaaagaaggacagcaagaaataaaagaaggggaagtttctcttcagcaaaag
cagcaggcacttcaagcgaaaaatgatgaattaatggaagcagataagcggtatcagcaa
ggcttgactcttcaaaaagagttaaaagaagcattaacaaaagtggagattcaacctgat
tatcggcaggctgttcagcaagcattttaccgttatcaagtatggaataacgataaaaaa
aacctagatgaaggtcaaaaaacgtataaagaaaaagccgaacagcttaagcatttgcac
acacaaaaacaaacacaccaagagagatatcagcaaacagtagaacaaagtaaagggtta
ttttcagatattcaaggcttgtatcacactgtatgtgagcgggaaaaagaatttcagcag
ctttttcaacaagcagatcgtttaatgagcgatctaaaaagacgcaaagaaaaagaatgg
tcacgccgtctggctcatcaattagctgagcagctgacccaaggtgagccttgtccagtt
tgtggctctgagcatcaccctaaccccgtgttacaccaacaagaagatgacatcacaact
gaatcagcggatcagttcgaagatcaagttaatcaattgcgtgaacagcgatttagttat
tcgtcgctcaaaatgcagcttgaacagctagctaaacctcttgttgaaaaaatacctgag
ttagctgagtttatgaacgaagctggcgaagttcctgctttaggagaaatggatacagat
gcctttggccattatgctaagaaaatagaagttgaaatcaaatctcttgagcaggattat
ttgcaggtaagtgaaaaacagcaagcaattctcgggcagatgcaaaaggtccagcaaagt
cttgaaaagattgaattagagcttgctcattatcaaaaagaacaagctgaattagaagga
aaagtaaatcagcaaaaacaggcgctacaagcgggaaaagaagcttttcaacaagactat
ccttcctttgtatttgaagagatggaaaaaattaataaaaggctgactgaaagagaaaaa
gaagagcagacaataaaggctcgaattgaaaaaagcagcttattttttgaaaatcagcaa
aagaaaatcgaacgtcttaaagaagagaaatatgcgggcgaaaaagaatttacagaatta
aaagcaatgctgtctcataaacaatctcttgttcactcgcaaattgaacgcttgcgtacg
cttacagatcaagaagatattgaacaggcgctgcaaaaaacagttcttttacttgcggag
ttagagacgaatgaacagcaggcatatcaacattggcagactgttcaaaaagcgtatcaa
acgctgcaaatggatgaaaaagcagcgagcgaatctctagaaacagctcatatgcagtat
aaaaaagcagctgaaaaatgggaagaagctatagggaattctttattcagcgaaggaaaa
gaagttcagcaagctttgttatcacatgatgagatgaaattgttggatgaaactgttcag
gcttattgggacaacataaaacagatgaagtcatcaattgaacagttaaatatccagctg
aatcaccagtccatagaagagcagcaatttgaagaaactcagcagctgcttcatgatata
aaagcggctgtgaaagaagccgttcagctcaagggagcagctgagcaaacgttaaaaagc
gtcaaagaacgacatgagcgatttttagtgcttgaacaagaccgtgaagaaaaacaagcg
ttatttgaacagtatcaaaagcttcaaacagtatttaaaggaaatgctttcgtggaatac
attgctgaagaacagctgatgtccgttagccgagatgcttcagagcgtctgggtatatta
acacgtcagcgctatgcgattgaagttgattcccaaggcggctttattatgagagatgat
gcaaatggaggcgtaaaacgtccggtttcaactttatctggtggagagacgtttttaact
tcgctggctttagccctttcattatctgcacaaattcagctaagaggagaatatccactg
cagtttttctttttagatgaaggatttggaacgcttgatggagagcttcttgatacggtt
gttacagcgcttgaaaagcttcaatcaaataatttatcaattggagtcatcagtcacgtt
caagaacttcgcgctcgtctgccaaaacgtttgattgttgagccatccgagccttctggc
aaaggaactagtgtaagagtagaaactttatag
DBGET
integrated database retrieval system
