Priestia megaterium QM B1551: BMQ_4118
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Entry
BMQ_4118 CDS
T01208
Name
(GenBank) conserved hypothetical protein
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
bmq
Priestia megaterium QM B1551
Pathway
bmq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bmq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BMQ_4118
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bmq03019
]
BMQ_4118
Messenger RNA biogenesis [BR:
bmq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
BMQ_4118
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KhpA-B_KH
KH_2
Motif
Other DBs
NCBI-ProteinID:
ADE71130
UniProt:
D5DQ29
LinkDB
All DBs
Position
complement(3959755..3961314)
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AA seq
519 aa
AA seq
DB search
MDTNTIIFALLGLIVGAVVGFFVCKSIAEAKIAGAKSSAEQIIDEGTREAEALKKEALLE
AKDEIHQLRTEAEQDIRDRRAELQKQENRLMQKEENLDRKDESLDKREALLEKKDDSLTV
KQQHIEEMESKVEEVVRAQQTELERISSLTREDARAIILDRVENELSHDIAIMVKETENR
AKEDADKKAKEILSLAIQRCAADHVAETTVSVVNLPNDEMKGRIIGREGRNIRTLETLTG
IDLIIDDTPEAVILSGFDPIRRETARIALDKLVQDGRIHPARIEEMVEKSRREVDEYIRE
VGEQTTFEVGVHGLHPDLMKILGRLKFRTSYGQNVLKHSMEVAHLSGLMAAELGEDETLA
KRAGLLHDIGKAIDHEVEGSHVEIGVELATKYKEHPVVINAIASHHGDTEPTSIIAVLVA
AADALSAARPGARSETLENYIRRLEKLEEISESYEGVEKSFAIQAGREVRIMVKPDTIGD
LEAHRLARDIRKRIEDELDYPGHIKVTVIRETRAVEYAK
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atggatactaatacaatcatcttcgctttgcttggcctaatcgtcggtgcagttgttggc
ttttttgtttgtaaatcgattgctgaagctaaaattgcgggagcaaagtctagtgcagaa
caaattatcgatgaaggaacccgcgaggcggaagctttgaaaaaagaagctttactagaa
gcgaaggatgaaatccatcagcttcgtacagaggcagaacaagatattcgtgatcgtcga
gcagaacttcaaaaacaagaaaatcgattaatgcaaaaagaggaaaatcttgatcgtaaa
gacgaatcacttgataaacgtgaagcgttacttgaaaagaaagatgattctcttactgtt
aaacaacagcatattgaagagatggaaagcaaagttgaagaagtagtacgtgcacagcaa
acagagctagagcgcatttcaagcttaacaagagaagatgcaagagcgattattttagat
cgtgttgagaatgaactttcccacgacattgcaataatggtaaaagaaacagaaaaccgt
gcaaaagaagacgccgataaaaaggcgaaagaaattctttcacttgctattcaacgttgc
gcagcagatcatgttgctgaaacgactgtctcagttgttaacttgccaaatgacgaaatg
aaaggccgaattattggtcgagaaggtcgaaacatccgtacgcttgaaactttgacagga
attgatcttattattgatgatacgccagaagcagttattttatcaggatttgacccaatt
cgtcgtgagacagcaagaattgcacttgataaactcgttcaagatggtcgtatccatccc
gcgcgtattgaagaaatggttgaaaaatctcgccgtgaagtggacgaatatattcgtgaa
gttggtgaacaaacgacgtttgaagtcggtgttcacgggttgcacccagacttgatgaaa
attcttggtcgcttaaaattcagaacaagctatggtcaaaatgtgctgaaacattcaatg
gaagtagcgcatttatcaggacttatggctgctgaattaggtgaagatgaaacgttagcc
aaacgagcaggattgttacatgatattggtaaagcaattgatcatgaggtagaaggaagt
cacgtagaaatcggtgttgaattagctacaaagtataaagaacatccggttgttattaac
gcgattgcttctcaccatggagatacagaaccaacatcaatcattgctgtactagttgca
gcagcggatgcattatctgctgcaagaccaggtgctcgtagtgagacgttagaaaactac
attcgtcgtcttgaaaagttagaagaaatttcagagtcttatgaaggcgttgaaaaatca
tttgcgattcaagcagggcgtgaagttcgtattatggtgaaaccagatacgattggtgat
ttagaagcgcatcgacttgctcgagatatccgaaaacgaattgaagatgagctggattat
cctggccacatcaaagtaaccgttattcgtgaaacaagagcagtagagtatgcaaaataa
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