Brucella suis ATCC 23445: BSUIS_A1290
Help
Entry
BSUIS_A1290 CDS
T00638
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase, beta' subunit
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
bmt
Brucella suis ATCC 23445
Pathway
bmt03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bmt00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
BSUIS_A1290 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bmt03021
]
BSUIS_A1290 (rpoC)
03400 DNA repair and recombination proteins [BR:
bmt03400
]
BSUIS_A1290 (rpoC)
Enzymes [BR:
bmt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
BSUIS_A1290 (rpoC)
Transcription machinery [BR:
bmt03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
BSUIS_A1290 (rpoC)
DNA repair and recombination proteins [BR:
bmt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
BSUIS_A1290 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Peptidase_M23
Biotin_lipoyl_2
RPOC_hybrid
RnfC_N
Motif
Other DBs
NCBI-ProteinID:
ABY38341
UniProt:
B0CH40
LinkDB
All DBs
Position
I:complement(1226719..1230921)
Genome browser
AA seq
1400 aa
AA seq
DB search
MNQEVMNLFNPQAPAQTFDSIRISIASPEKILSWSYGEIKKPETINYRTFKPERDGLFCA
RIFGPIKDYECLCGKYKRMKYKGIICEKCGVEVTLSRVRRERMGHIELAAPVAHIWFLKS
LPSRIGTLLDMTLKDIERVLYFENYIVTEPGLTSLKEHQLLSEEEYMIAVDEFGEDQFTA
LIGAEAIYELLASMELEKIAADLRVDLAETTSDLKQKKLMKRLKIVENFLESGNRPEWMI
MKIVPVIPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLIELRAPGIIIRNEKRM
LQEAVDALFDNGRRGRVITGANKRPLKSLSDMLKGKQGRFRQNLLGKRVDYSGRSVIVTG
PELKLHQCGLPKKMALELFKPFIYARLDAKGYSSTVKQAKKLVEKERPEVWDILDEVIRE
HPVLLNRAPTLHRLGIQAFEPTLIEGKAIQLHPLVCTAFNADFDGDQMAVHVPLSLEAQL
EARVLMMSTNNILHPANGAPIIVPSQDMVLGLYYLSIVAEKEPGEGMIFADMGELQHALE
NKVVTLHTKIKGRFKTVDAEGNPVSKIYDTTPGRMIMGELLPKNVNVPFDICNQEMTKKN
ISKMIDHVYRHCGQKETVIFCDRIMQLGFAHACRAGISFGKDDMVIPESKAKIVAETEAL
TTEYEQQYNDGLITQGEKYNKVVDAWGKATDKITEEMMARLKAVEFDPVTGRQKQMNSVY
MMSHSGARGSVNQMRQLGGMRGLMAKPSGEIIETPIISNFKEGLTVNEYFNSTHGARKGL
ADTALKTANSGYLTRRLVDVAQDAIISEVDCGAEIGLTMQPIVDAGQIVASIGQRVLGRT
ALDPILHPVTGEVIVEAGRMIEEKDVEIIEKAGIQSIRIRSALTCETRDGVCAKCYGRDL
ARGTPVNQGEAVGVIAAQSIGEPGTQLTMRTFHLGGTAQVVDSSYLEASYEGTVKLRNRN
VVRNSDGNLVVMGRNMAVLILDATGKERAVHRVTYGSRLFVDEGDTVKRGQRIAEWDPYT
RPIMTEVEGYIEFEDLVDGLSVSETADESTGITKRVVIDWRSTPRGSDLKPAMVIKDKAG
KILKLSKGGDARFLLSVESILSVEPGAHVKAGDVIARLPMESAKTKDITGGLPRVAELFE
ARRPKDHAIIAEIDGTVRFGRDYKNKRRIIIEPNDDTIEPVEYLIPKGKPFHLQDGDVIE
KGEYILDGNPAPHDILAIKGVEALASYLVNEIQEVYRLQGVLINDKHIEVIVRQMLQKVE
ITESGDTGYIPGDHVDRIELEEINERLIEEGKKPGSGNPVLLGITKASLQTPSFISAASF
QETTRVLTEAAVAGKMDTLQGLKENVIVGRLIPAGTGGMTNQIRRIATARDELIIDERRK
TSGSAEANAMLVDMTNNAAE
NT seq
4203 nt
NT seq
+upstream
nt +downstream
nt
atgaaccaagaggtcatgaatcttttcaatcctcaggctccggcgcaaacgttcgattcc
atcagaatctcgatcgccagccctgagaagattctgtcctggtcatacggcgagatcaag
aagccggagacgatcaactaccgtacgttcaagccagaacgcgatggtctcttctgcgcg
cgcatcttcggcccgatcaaggactatgaatgcttgtgcggcaagtacaagcgtatgaaa
tacaagggcatcatctgcgaaaaatgcggcgtggaagtcacgctttcccgcgttcgccgc
gagcgcatgggccatatcgaacttgcagcaccggttgcgcatatctggttcctgaagtcg
ctgccaagccgcatcggcacgcttctggacatgacgctcaaggatatcgagcgcgtcctg
tactttgaaaactacatcgtcaccgaacccggcctgacctcgctgaaggagcaccagctt
ctgtcagaagaggaatatatgatcgccgtcgatgaattcggcgaagatcagttcacggcg
ctcatcggggcggaagcgatctacgaactgctggcttcgatggaacttgaaaagatcgct
gcggacctgcgcgtcgatctggccgagaccacttcggacctgaagcagaagaagctgatg
aagcgtctgaagatcgtcgagaacttcctggagtcgggaaaccgcccggaatggatgatc
atgaagatcgttccggtgatcccgccggatctgcgcccgctcgtgccgctggatggcggt
cgttttgcgacgtcggatctcaacgatctctatcgccgcgtcatcaaccgtaacaaccgt
ctgaagcgcctgatcgaactgcgcgcgccgggcatcatcatccgcaacgaaaagcgcatg
ttgcaggaagctgtcgatgcgctgttcgacaacggccgtcgcggccgcgtcatcaccggt
gccaacaagcgcccgctgaagtcgctgtccgacatgctcaagggcaagcagggccgcttc
cgtcagaacctgctcggcaagcgcgtggactattcaggccgttcggtcatcgtgaccggc
ccggaactgaagctgcaccagtgcggcctgccgaagaagatggcgctcgaactgttcaag
ccgttcatctatgcgcgtcttgacgccaagggctattcgtccaccgtcaagcaggcgaag
aagctggttgaaaaggaacgcccggaagtctgggatatccttgacgaagtgatccgcgag
catccggttcttctgaaccgtgccccgacgctgcaccgtctcggcatccaggcgtttgaa
ccgaccctgatcgaaggcaaggccattcagcttcatccgctcgtctgcacggcgttcaat
gccgacttcgacggcgaccagatggctgttcacgttccgctttcgcttgaagcccagctt
gaagcgcgcgtgctgatgatgtcgaccaacaacatcctgcatccggccaacggcgcaccg
atcatcgttccgtcacaggatatggttctcggcctctattatctgtccatcgtggcggag
aaggagccgggcgagggcatgatattcgccgatatgggcgagctacaacatgcgcttgaa
aacaaggtcgtcacgctgcacaccaagatcaagggccgtttcaagacggtcgatgccgaa
ggcaaccctgtgtcgaagatttacgacacgacgccgggccgcatgatcatgggtgaattg
ctgccgaagaacgtcaacgttccgttcgatatctgcaatcaggagatgaccaagaagaac
atctccaagatgatcgaccatgtttaccgccattgcggccagaaagagacggttatcttc
tgtgaccgcatcatgcagcttggttttgcccatgcttgccgtgcgggtatctccttcggc
aaggatgacatggtcatcccggaatcgaaggccaagatcgttgcggaaaccgaagcgctt
acgaccgaatacgaacagcagtacaatgacggcctgattacgcagggcgaaaagtacaac
aaggtcgttgacgcctggggcaaggcaaccgacaagatcaccgaagagatgatggcgcgc
ctgaaggccgtcgaattcgatccggtgaccggtcgccagaagcagatgaactcggtctac
atgatgtcgcattcgggtgcccgtggttcggtcaaccagatgcgccagcttggcggcatg
cgcggcctgatggccaagccgtcgggtgaaatcatcgagaccccgatcatctcgaacttc
aaggaaggcctgaccgtgaacgagtacttcaactcgacccacggcgcccgcaagggtctg
gcagacaccgccttgaagacggccaactcgggctacctgacccgtcgtctcgttgacgtt
gcacaggatgcgattatttcggaagtcgattgcggcgccgaaatcggtctcaccatgcag
cccatcgtcgatgccggccagatcgtcgcctcgatcggccagcgcgttctgggccgtacg
gctctcgatccgatcctgcatccggtaaccggcgaagtcatcgtcgaggctggccgcatg
atcgaggagaaggacgtcgagatcatcgagaaggctggcatccagtcgattcgcatccgt
tcggccctcacctgtgaaacccgcgacggcgtttgcgccaagtgctatggccgcgacctt
gcacgcggcacgccggtcaaccagggtgaagctgtcggcgttatcgccgctcagtcgatc
ggcgagccgggcacccagctcaccatgcgtaccttccacttgggcggtaccgcacaggtg
gtcgacagctcctatcttgaagcttcgtatgaaggcaccgtcaagctgcgcaaccgcaat
gtggttcgcaactccgatggcaacctcgtggtgatgggccgtaacatggctgtcctgatc
ctcgacgctacgggcaaggaacgtgcggtccatcgcgtgacctatggttcgcgtctgttc
gtggacgagggcgatacggtcaagcgcggccagcgcattgccgagtgggatccgtatacc
cgtccgatcatgacggaagtcgaaggctacattgagtttgaagatctcgtcgatggtctg
tcggtttcggaaacggccgacgagtcgactggtatcaccaagcgcgttgtcatcgactgg
cgttcgaccccgcgcggttcggatctcaagcctgccatggtcatcaaggacaaggccggc
aagatcctgaaactgtcgaagggtggcgatgcccgcttcctgctctccgtggaatcgatc
ctttcggttgagccgggcgcgcatgtgaaggctggcgacgttatcgcccgtctgccgatg
gaaagcgccaagaccaaggacatcaccggtggtctgccgcgcgtggctgaactgtttgaa
gctcgccgtccgaaggaccacgccatcatcgccgagatcgatggtaccgtccgtttcggt
cgcgactacaagaacaagcgccgcatcattatcgagccgaacgacgatacgatcgagccg
gttgagtatctcattccgaagggcaagccgttccatcttcaggacggtgacgtcatcgaa
aagggtgagtatatcctcgacggcaacccggcaccgcatgacattctggcgatcaagggc
gtggaagctctggcttcctacctcgtgaacgaaatccaggaagtctatcgcttgcagggc
gttttgatcaacgacaagcacatcgaagtgatcgttcgccagatgttgcagaaggtggaa
atcacggaatccggcgataccggctatattccgggtgaccacgttgaccgcatcgagctg
gaagagatcaacgaacgtcttatcgaagaaggcaagaagccgggctccggcaatcctgtc
ctcctcggtatcaccaaggcttcgctgcagacgccttcgttcatctcggccgcgtcgttc
caggaaacgacccgtgtgctgaccgaagctgcggttgccggtaagatggacacgttgcag
ggtctcaaggaaaacgtcatcgtcggccgtctcatcccggccggtactggcggcatgacc
aaccagatccgtcgcatcgcaaccgcgcgcgacgaactgattatcgacgaacgtcgcaag
acttccggttcggccgaagcaaatgcgatgctggttgatatgaccaacaacgctgccgaa
taa
DBGET
integrated database retrieval system
