Burkholderia multivorans ATCC 17616 (JGI): Bmul_0627
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Entry
Bmul_0627 CDS
T00624
Name
(GenBank) DEAD/DEAH box helicase domain protein
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
bmu
Burkholderia multivorans ATCC 17616 (JGI)
Pathway
bmu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bmu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Bmul_0627
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bmu03019
]
Bmul_0627
Enzymes [BR:
bmu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Bmul_0627
Messenger RNA biogenesis [BR:
bmu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Bmul_0627
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
HI1480
P-loop_SecA
Ric8
DegT_DnrJ_EryC1
Cas3-like_C_2
Sacchrp_dh_NADP
ERCC3_RAD25_C
AAA_22
CARD_2
Motif
Other DBs
NCBI-ProteinID:
ABX14322
UniProt:
A0A0H3KH74
LinkDB
All DBs
Position
1:complement(686282..687724)
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AA seq
480 aa
AA seq
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MSFESLGLAEPLVKAVNELGYTSPTPIQQQAIPAVLGGGDLLAGAQTGTGKTAGFTLPIL
QRLHTFYTEHRSAKRAVRALILTPTRELAAQVEESVRAYSKYLKLRSTVMFGGVSINPQI
DALKRGVDIVVATPGRLLDHMQQKTIDLSDLDILVLDEADRMLDMGFIHDIKRVLAKLPP
RRQNLLFSATFSDEIKALADSLLDSPALIEVARRNTTAETVAQKIHPVDRDRKRELLTHL
IREHNWFQVLVFTRTKHGANRLAEQLTKDGISAMAIHGNKSQSARTRALAEFKNNTLQVL
VATDIAARGIDIDQLPHVVNFDLPNVPEDYVHRIGRTGRAGATGEAVSLVCVDEKQLLRD
IERLIKREIPREVIAGFEPDPNAKPEPIQQRRGQQPRGGGGNGGGGGGNRAPRAGGAAQQ
PGAKRDGQAPKPKAAAKPRPQGGGNGNGARPSGGNGARAANGNAAHPNRNRSSRSGQRGH
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atgtctttcgaatctctcggcctggccgaaccgctcgtcaaggcggtcaacgagctcggc
tacacgtcgccgaccccgatccagcagcaggccattcctgcggtcctcggcggcggcgat
ctgctcgccggcgcgcagaccggcaccggcaaaaccgcaggcttcacgctgccgatcctg
cagcgcctgcataccttctacaccgagcatcgcagcgcaaagcgcgccgtgcgcgcactg
atcctcacgccgacgcgcgaactcgccgcccaggtcgaggaaagcgtgcgtgcgtacagc
aagtatctgaagctgcgctcgaccgtgatgttcggcggcgtcagcatcaatccgcagatc
gatgcgctcaagcgcggcgtcgacatcgtcgtcgcgacgccgggccgcctgctcgatcac
atgcagcaaaagacgatcgacctgtcggatctcgacatcctcgtgctcgacgaagccgat
cggatgctcgacatgggcttcatccacgacatcaagcgcgtgctggcaaagttgccgccg
cgccgccagaacctgctgttctcggcgacgttctccgacgagatcaaggcgctcgccgac
agcctgctcgattcgccggcgctgatcgaggtcgcgcgccgcaacacgaccgccgagacg
gtcgcgcagaagatccatccggtcgaccgcgatcgcaagcgcgaactgctcacgcatctg
atccgcgagcacaactggttccaggtgctcgtcttcacgcgcacgaagcacggcgcgaac
cggctcgccgaacagctgaccaaggacggcatcagcgcgatggcgatccacggcaacaag
agccagtcggcccgcacgcgcgcgctcgccgagttcaagaacaacacgctgcaggtgctc
gtcgcgaccgacatcgccgcgcgcgggatcgacatcgatcagctgccgcacgtcgtcaac
ttcgatctgccgaacgtgcccgaggattacgtgcaccgcatcggccgcacgggtcgcgca
ggcgcgaccggcgaagccgtgtcgctcgtgtgcgtcgacgagaagcagctgctgcgcgac
atcgaacggctaatcaagcgcgagattccgcgtgaagtgatcgcgggcttcgagcccgat
ccgaacgcgaagccggaaccgatccagcagcgtcgcggccagcagccgcgcggcggtggc
ggcaatggcggcggcggtggcggcaatcgtgcgccgcgcgccggcggcgccgcccagcag
ccgggcgcgaagcgcgacggccaggcaccgaagccgaaggcggccgccaagccgcgcccg
caaggcggcggcaacggcaacggcgcgcgcccgtcaggcggcaacggcgcacgtgccgca
aacggcaacgccgcgcacccgaaccgcaatcgttcgtcgcgcagcggccagcgcggtcac
tga
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