Burkholderia multivorans ATCC 17616 (JGI): Bmul_0961
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Entry
Bmul_0961 CDS
T00624
Name
(GenBank) DEAD/DEAH box helicase domain protein
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
bmu
Burkholderia multivorans ATCC 17616 (JGI)
Pathway
bmu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bmu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Bmul_0961
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bmu03019
]
Bmul_0961
Enzymes [BR:
bmu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Bmul_0961
Messenger RNA biogenesis [BR:
bmu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Bmul_0961
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
ERCC3_RAD25_C
Motif
Other DBs
NCBI-ProteinID:
ABX14652
LinkDB
All DBs
Position
1:1052380..1053909
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AA seq
509 aa
AA seq
DB search
MSAGPAGLTRDVPAAPFERNATMSDSVAKPVDATFDQFGLAADILKAIAEQGYTTPTPIQ
AQAIPVVLAGRDVMGAAQTGTGKTASFSLPIIQRLLPQANTSASPARHPVRALILTPTRE
LADQVAANVHAYAKHTPLRSAVVFGGVDMNPQMAELRRGVEILIATPGRLLDHVQQKTAN
LGQVQILVLDEADRMLDMGFLPDLQRILNLLPKERQTLLFSATFSPEIKKLASTYLRNPQ
TIEVARSNSTNANVTQIVYDVAEGDKQAAVVQLLRDRGLKQVIVFCNSKIGASRLARQLE
RDGVVASAIHGDKSQLERMQALDAFKRGEIEALVATDVAARGLDIAELPAVINFDLPFNA
EDYVHRIGRTGRAGATGDALSLCSPNERKQLADIEKLIKRPLEVQTLVLDKPARHRHDER
GGERGGERGGRRDRDEHRGASGRRSPGAERGHHRRHEPPVDDFFLKPYEPSAPTKQAEDT
KPAQPEKKTPKRQVAALLGGFGMPRKPTS
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcaggcccggccggcctgacgcgcgatgtccccgccgcgccttttgagcgaaac
gccaccatgtccgattctgtcgccaagcctgtcgacgccaccttcgatcaattcggcctt
gccgccgacatcctgaaagccattgcggagcagggctatacgacgccgacgccgatccag
gcgcaggccattccggtcgtgctcgccggccgcgacgtcatgggcgccgcgcaaacgggc
accggcaagaccgcgagcttctcgctgccgatcatccagcgtctgctgccgcaggcgaac
acgagcgcgtcgcccgcgcgccaccccgtgcgtgcgctgatcctcacgccgacgcgcgaa
ctcgccgaccaggtcgccgcgaacgtgcatgcgtacgcgaaacacacgccgctgcgcagc
gcggtcgtgttcggcggcgtcgacatgaatccgcagatggcggaactgcgccgcggcgtc
gaaatcctgatcgcgacgccgggccgtctgctcgaccacgtgcagcaaaagaccgcgaac
ctcggccaggtacagatcctcgtgctcgacgaagcggaccggatgctcgacatgggcttt
ctgcccgacctgcagcgcatcctgaacctgctgccgaaggagcgtcagacgctgctgttc
tcggcgacgttctcgcccgaaatcaagaagctcgcgtcgacgtacctgcgcaacccgcag
acgatcgaagtcgcgcgcagcaattcgacgaacgcgaacgtcacgcagatcgtctacgac
gtcgccgaaggcgacaagcaggcggcggtcgtgcaactgctgcgcgatcgcggcctcaag
caggtgatcgtattctgcaacagcaagatcggcgcgagccggctcgcgcgtcagctggaa
cgcgacggcgtggtcgcatcggctatccacggcgacaagtcgcagctcgagcggatgcag
gcactcgacgcattcaagcgcggcgagatcgaggcgctcgtcgcgaccgacgtggccgcg
cgcggcctcgatatcgcggaactgccggccgtgatcaacttcgatctgccgttcaacgcg
gaagactacgtgcaccggatcggccgcacgggccgtgcgggcgcgaccggcgacgcgctg
tcgctgtgcagcccgaacgagcgcaagcagctcgccgatatcgagaagctgatcaagcgt
ccgctcgaggtgcagacgctcgtgctcgacaagccggcgcgccatcgtcatgacgagcgc
ggcggtgaacgcggcggcgagcgcggcgggcggcgcgatcgcgacgagcatcgcggcgcg
tcgggccgccgttcgcccggtgcggagcgtggccatcatcgccgccacgagccgccggtc
gacgatttcttcctgaagccgtacgagccgtccgcgccgaccaagcaggccgaagacacg
aagccggcgcagccggagaagaagacgccgaagcgtcaggttgccgcgttgctcggcggg
ttcggcatgccgcgcaagccgaccagctga
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