Bacteroides mucinivorans: VCM39_08365
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Entry
VCM39_08365 CDS
T11858
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
bmuc Bacteroides mucinivorans
Pathway
bmuc03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
bmuc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
VCM39_08365 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bmuc03400
]
VCM39_08365 (uvrB)
DNA repair and recombination proteins [BR:
bmuc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
VCM39_08365 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
VCM39_08365 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
EAD4
PIP5K
HIND
Guanylate_kin
Motif
Other DBs
NCBI-ProteinID:
XNS72342
LinkDB
All DBs
Position
complement(2296160..2298190)
Genome browser
AA seq
676 aa
AA seq
DB search
MNFELTSAYKPTGDQPEAIAQLTEGIKQGLPAQTLLGVTGSGKTFTIANVIANINKPTLI
LSHNKTLAAQLYSEFKGFFPNNAVEYYVSYYDYYQPEAYLPSSDTYIEKDLAINDEIDKL
RLAATSSLLSGRKDVVVVSSVSCIYGMGNPSDFYDNVIEVERGRMLDRNVFLRRLVDSLY
VRNDLDLNRGNFRVKGDTVDIYLAYSDTILRVTFWGDEIDGIEEVDPISGITIAPFESYK
IYPANLFMTTKEATLRAIHEIEDDLTKQVAFFESIGKEYEAKRLYERVTYDMEMIRELGH
CSGIENYSRYFDGRSAGTRPYCLLDFFPDDFLIVIDESHVSVPQIRAMYGGDRARKINLV
EYGFRLPAAMDNRPLKFEEFQEMAKQVIYVSATPADYELVQSEGIIVEQVIRPTGLLDPV
IEVRPSLNQIDDLMEEIQIRIEKEERTLVTTLTKRMAEELTEYLLNNNVRCNYIHSDVDT
LERVKIMDDLRQGVYDVLIGVNLLREGLDLPEVSLVAILDADKEGFLRSHRSLTQTAGRA
ARNVNGKVIMYADKMTESMQLTIDETNRRREKQLAYNEANGITPQQIKKARNLAVFGGNN
TEEMLKEKHVYIEPSSPNVAADPIIQYMTKAQMQKSIDRTRKLMQEAAKKLEFIEAAQYR
DELLKLEDLMKEKWEE
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
atgaattttgaattaacatccgcctataagcctacaggcgaccagcctgaggctattgcc
caattaaccgaaggtataaaacaaggattacctgcccagaccctattgggtgttacgggc
tcaggaaagacgtttactatagccaacgtcatagctaatatcaacaaacctacattgata
ttgagccacaacaaaacgctggctgcccagctatacagtgaatttaaaggatttttcccc
aacaacgctgtggaatactatgtttcatactacgattattatcagccggaagcctatctt
cccagctctgatacgtatatcgaaaaagatcttgccatcaatgatgaaatagataagcta
cggcttgccgccacttcttccctactctcaggacgtaaagatgtagtggtagtttcttct
gtttcatgcatctatggtatgggaaatccatccgacttctatgacaatgtcatagaagtg
gaacgggggcgtatgctggatcgtaatgtatttctgcgccgtctcgtagacagcctttat
gtacgcaatgacctggatctgaatcgtggtaacttccgtgtaaaaggtgatacagtagac
atttatctggcctattccgataccatcctgcgagtgactttttggggagatgaaattgat
ggaattgaagaagtagatccgatctcaggcataacaattgctccttttgagtcatataaa
atatatccggctaatttatttatgacaaccaaagaggcaactctacgtgctatccacgaa
atagaagatgaccttaccaagcaagtagcctttttcgaatctatcggaaaagaatatgaa
gccaagcgtctttatgaacgggtgacgtatgatatggaaatgattcgcgagctggggcac
tgttccggtattgagaactattcacgttattttgatggtcgcagtgccggtacccgcccc
tattgcctgctcgactttttcccggatgactttctaattgttatagacgaaagccatgtt
agcgtcccacagatacgtgctatgtatggtggtgaccgcgcccgaaaaatcaatctggta
gaatatggttttcgcctacctgcagccatggacaaccgtcctcttaaatttgaagagttt
caggaaatggccaaacaggttatttatgtcagtgcgactccggccgattatgaactggta
cagtctgaaggtatcattgtggaacaagtaatccgacctaccggtctgcttgaccctgtg
attgaggtacgtcccagcctcaaccagattgatgatcttatggaagaaattcaaatacgt
atcgaaaaagaggaacgtactctcgtgacgactttaactaagcgcatggctgaggaatta
acagaatatttgcttaataacaatgtgcgatgcaactatatccacagcgatgtagataca
cttgagcgtgtaaaaattatggacgaccttcgtcaaggtgtgtacgatgtattgatcggt
gtaaaccttttacgtgaaggacttgatttaccagaagtatctttggttgccattcttgat
gcagacaaagagggattcctgcgctcccatcgttccctgacacaaacagccggacgtgct
gcccgaaatgtaaacggaaaagtaatcatgtatgcagacaagatgacagaaagtatgcag
ctgacaattgacgaaaccaaccgacgccgggaaaaacagcttgcttataatgaagcaaat
ggcatcaccccacaacaaataaagaaagcacgtaatctcgctgtattcggtggaaacaat
accgaggaaatgctaaaagaaaaacatgtttatatagaaccatcaagcccgaatgtagct
gctgatccgatcattcaatatatgactaaagctcagatgcaaaagagcatagaccgtaca
cgcaagttaatgcaggaagctgccaaaaaactggaattcatcgaagcagctcaatatcgt
gacgaattactgaaactggaagatcttatgaaagaaaagtgggaagaataa
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