KEGG   Bacteroides mucinivorans: VCM39_22125
Entry
VCM39_22125       CDS       T11858                                 
Name
(GenBank) RNA polymerase sigma-70 factor
  KO
K23514  RNA polymerase sigma-19 factor, ECF subfamily
Organism
bmuc  Bacteroides mucinivorans
Pathway
bmuc02020  Two-component system
Brite
KEGG Orthology (KO) [BR:bmuc00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    VCM39_22125
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:bmuc03021]
    VCM39_22125
Transcription machinery [BR:bmuc03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     VCM39_22125
SSDB
Motif
Pfam: Sigma70_r4_2 Sigma70_r2 Sigma70_r4 Sigma70_ECF GerE HTH_24 HTH_23 HOATZ-like DUF722 Izumo-Ig DUF3071
Other DBs
NCBI-ProteinID: XNS70690
LinkDB
Position
5916125..5916712
AA seq 195 aa
MEKINKEIVLLLINGSHSAFSKIYVKCHRQFFLLALRYLKSKEMAEDAVQYSFMRLWETR
TQIDVEQGVEPYLYGILKNHLLNTYKFHQLTLEKKEEIILGMPLFEEENITQTLYRKQRD
EAIQKALAQLPPQKRRICQMKIFEGLSNAEIAEQLNITVNTVKVSYYKAILSLRESLNEK
DFICICMVLLSASFS
NT seq 588 nt   +upstreamnt  +downstreamnt
atggaaaagataaacaaagaaatagttttattacttatcaacggtagtcattcggccttc
tccaaaatatacgtaaagtgtcaccggcaatttttcctgctggcattacgctatctgaaa
tcaaaagaaatggcagaagatgcggtgcaatactcatttatgagactgtgggaaacccgc
acgcagatcgatgtagagcaaggagtggaaccttacctatacggtatccttaaaaatcac
ctgttaaatacatataagtttcatcagctgactcttgaaaaaaaagaggaaatcatactg
ggaatgccgctttttgaagaagagaatattacacaaaccctgtacagaaaacagcgtgac
gaagctatacaaaaagccttagcccagttaccacctcaaaaacgccgtatttgccaaatg
aaaatcttcgaaggcttatccaatgccgaaatagccgaacaacttaatattaccgtcaac
accgtaaaagtatcttattataaagctatattgtcattgcgtgaaagcctgaacgaaaaa
gatttcatctgtatttgcatggtattgcttagtgcctccttttcctaa

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