Bacteroides mucinivorans: VCM39_22125
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Entry
VCM39_22125 CDS
T11858
Name
(GenBank) RNA polymerase sigma-70 factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
bmuc Bacteroides mucinivorans
Pathway
bmuc02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
bmuc00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
VCM39_22125
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bmuc03021
]
VCM39_22125
Transcription machinery [BR:
bmuc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
VCM39_22125
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
Sigma70_ECF
GerE
HTH_24
HTH_23
HOATZ-like
DUF722
Izumo-Ig
DUF3071
Motif
Other DBs
NCBI-ProteinID:
XNS70690
LinkDB
All DBs
Position
5916125..5916712
Genome browser
AA seq
195 aa
AA seq
DB search
MEKINKEIVLLLINGSHSAFSKIYVKCHRQFFLLALRYLKSKEMAEDAVQYSFMRLWETR
TQIDVEQGVEPYLYGILKNHLLNTYKFHQLTLEKKEEIILGMPLFEEENITQTLYRKQRD
EAIQKALAQLPPQKRRICQMKIFEGLSNAEIAEQLNITVNTVKVSYYKAILSLRESLNEK
DFICICMVLLSASFS
NT seq
588 nt
NT seq
+upstream
nt +downstream
nt
atggaaaagataaacaaagaaatagttttattacttatcaacggtagtcattcggccttc
tccaaaatatacgtaaagtgtcaccggcaatttttcctgctggcattacgctatctgaaa
tcaaaagaaatggcagaagatgcggtgcaatactcatttatgagactgtgggaaacccgc
acgcagatcgatgtagagcaaggagtggaaccttacctatacggtatccttaaaaatcac
ctgttaaatacatataagtttcatcagctgactcttgaaaaaaaagaggaaatcatactg
ggaatgccgctttttgaagaagagaatattacacaaaccctgtacagaaaacagcgtgac
gaagctatacaaaaagccttagcccagttaccacctcaaaaacgccgtatttgccaaatg
aaaatcttcgaaggcttatccaatgccgaaatagccgaacaacttaatattaccgtcaac
accgtaaaagtatcttattataaagctatattgtcattgcgtgaaagcctgaacgaaaaa
gatttcatctgtatttgcatggtattgcttagtgcctccttttcctaa
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