Burkholderia multivorans ATCC BAA-247: NP80_1321
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Entry
NP80_1321 CDS
T03881
Symbol
recB
Name
(GenBank) exodeoxyribonuclease V, beta subunit
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
bmul
Burkholderia multivorans ATCC BAA-247
Pathway
bmul03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bmul00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
NP80_1321 (recB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bmul03400
]
NP80_1321 (recB)
Enzymes [BR:
bmul01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
NP80_1321 (recB)
DNA repair and recombination proteins [BR:
bmul03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
NP80_1321 (recB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
UvrD_C
UvrD_C_2
PDDEXK_1
AAA_30
Motif
Other DBs
NCBI-ProteinID:
AJY19823
LinkDB
All DBs
Position
1:1392186..1395896
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AA seq
1236 aa
AA seq
DB search
MSAASPSQPALELDVFACPLDGVNQIEASAGTGKTWNICALYVRLLLEQDLGADQILVVT
FTKAATAELHERIRGRLAQLAHALDTGDDGGDPFVAKLFETTLAAGGPLDTATAAKRIRR
ALRAFDQAAIHTIHAFCQRALQEAPFAAAMPFAFEMEADDASLRFELAADFWRTRVEPTA
ARWPGFAAWLVQSGAGPAALDAQLARRLKKPLAALRWDGVAEPDDSADAAAAECFAEAAR
LWEAERDAIDALLRAAQPALNQRSHKPDAIAEAFAAWGAHFAQRDAAAALPKAALKLTRT
ALEKATKKGGATPEHPFFDVADALEAAVAAADAAQRARWLALIAEWLDTAPAELAERKRT
RRVVSFDDLLANLYHALHAHPWLADTLRARYPAALIDEFQDTDPLQFAIFDRIFAPAGPL
FLVGDPKQAIYSFRAADLHTYLAARARASACYTLAVNQRSTPAIVEACNRFFQSNPRAFV
LDGLDYYPVRAGTRTRAPFADETDPAPSGDFRIWMLPGGDGTLLKRDAHAQAAQACAAEI
ARLMRGAREGHVRLGETPLSPGDIAVLVQTHRQGSLVKRVLAAWGIGSVELAQASVFSTI
DAEQLERVLAAIDAPGDLRRLRAALASDWFGLDAGALWRMEQGDADAQHDAGATDTADAM
SWVERFSRYRLLWRERGFAVMWRTFARELRIAERLMAGADGERRVTDINHLAELTQARAS
AQPGIAPTLRWLAAQRLDGGGEEAQLRLESDRNLVQIVTVHKSKGLEYAIVFCPFLNDGG
LREPPASALPDAREYHDEAGDAVLHYGCDDEAAAHAARQALREQAAERARLVYVALTRAV
YRCYLVAGPYLSSRSTREARRSVLNWLVAGAGRSFDAWLGEPPDDAELDAAWRALAGGPV
SVAPLPAPARRERLPAGHDASQTLAARHATRVLRDAWRMASFSSLTASIAREEAGVAPVP
DDELRPDHDALAALVPGADIGAAATVAPEPPDDDILVFPRGAAAGECLHRLFELSRFAEP
ASWPAAALGALHDRPVEAEPALAERLPAMMVRLVDDVVHTELVPGLRLADLDPSKRLNEM
GFLFPAPSLDLGALRRLLVTHGYPDVALDAGTLAGFIKGFIDMIVEHDGRFWIVDWKSNH
LGTTPDAYGPQALDAAMADHAYHLQALLYTVALHRYLRTRLAGYDYDRHIAGYLYLFVRG
VRPDWRSGGAPAGVHARRPARELVDALDRMMEGGAA
NT seq
3711 nt
NT seq
+upstream
nt +downstream
nt
atgagcgccgcttcgccatcgcagccggcgctcgaactcgacgtgttcgcgtgtccgctc
gacggcgtgaaccagatcgaggcatctgccggcaccggcaagacatggaacatctgcgcg
ctgtacgtgcggctgctgctcgagcaggatctcggcgccgaccagatcctcgtcgtcacg
tttacgaaggcggcgaccgccgagctgcacgagcggattcgcggccggcttgcgcagctc
gcgcatgcgctcgacacgggcgacgacggcggcgatccgttcgtcgcgaagctgttcgag
acgacgctcgccgcgggcggtccgctcgataccgcgacggcggccaagcgtattcgccgc
gcgctgcgcgcgttcgaccaggcggcgatccacacgatccacgcgttctgccagcgggcg
ttgcaggaagcgccgttcgcggccgcgatgccgttcgcgttcgagatggaagcggacgac
gcgtcgctgcgcttcgagctcgcagccgatttctggcgcacgcgcgtcgaaccgacggcg
gcgcgctggcccggtttcgccgcctggctcgtgcagtcgggcgcggggccggccgcgctc
gatgcgcaactcgcgcgccgcttgaagaagccgctcgccgcgctgcgctgggacggcgtc
gccgagcccgacgactcggccgacgccgcggcggcagaatgcttcgcggaagcggcgcgt
ctctgggaagccgagcgcgacgcgatcgacgcactgctgcgtgccgcgcagccggcgctg
aaccagcgctcgcacaagcccgacgcgatcgccgaggcgttcgccgcatggggtgcgcat
ttcgcgcagcgcgatgcggccgccgcgttgccgaaggccgcgctgaagctcacgcgcacc
gcactcgagaaggcgacgaaaaagggcggcgcgacgcccgagcatccgttcttcgacgtc
gccgacgcgctcgaagcggccgtcgcagccgccgacgccgcgcagcgcgctcgctggctc
gcgctgatcgccgaatggctcgacacggcgccggccgagctcgccgagcgcaagcggacg
cggcgcgtcgtgtcgttcgacgatctgcttgcgaacctgtatcacgcactgcatgcgcat
ccgtggctcgccgacacgctgcgcgcgcgctatccggccgcgctgatcgacgagttccag
gacaccgatcccttgcagttcgcgatcttcgaccggatcttcgcgccggcaggcccgctc
tttctcgtcggcgatccgaagcaggcgatctacagctttcgcgcagccgatctgcatacc
tatctcgccgcccgcgcgcgtgcgagcgcgtgctacacgcttgcggtcaatcagcgttcg
acgccggcgatcgtcgaggcatgcaaccgctttttccagtcgaatccgcgcgccttcgtg
ttggacgggctcgactactacccggtgcgcgcgggcacgcgcacgcgtgcgccgttcgcg
gacgagaccgatccggcgccgtccggcgacttccggatctggatgctgccgggcggcgac
ggcacgctgctcaagcgcgatgcgcacgcacaggccgcacaggcatgcgcggccgagatc
gcgcggctgatgcgcggcgcgcgcgagggccatgtccggctcggcgagacgccgctgtcg
ccgggcgacatcgcggtgctcgtgcagacgcaccgtcagggcagcctcgtgaagcgcgtg
ctcgccgcgtggggcatcggcagcgttgaacttgcgcaggcgtcggtattctcgacgatc
gatgcggagcagctcgagcgcgtgctcgcggcgatcgatgcgcccggcgatctgcggcgt
ctgcgcgcggcgctcgcgtccgactggttcggcctcgacgccggcgcactgtggcgcatg
gagcagggcgacgccgatgcgcaacacgatgcgggcgcaaccgatacggccgacgcgatg
agctgggtcgagcggttttcccgctatcggctgctgtggcgcgaacgcggtttcgcggtg
atgtggcgcacgttcgcgcgcgagttgcggatcgccgagcgcctgatggccggcgcggac
ggcgagcgccgcgtgaccgacatcaatcatctggccgaactgacgcaggcgcgtgcgtcc
gcgcagccgggcatcgcgccgacgctgcgctggcttgccgcgcagcggctcgacggcggc
ggcgaggaagcgcaattgcggctcgaatcggaccgcaatctcgtgcagatcgtgaccgta
cacaaatcgaaggggctcgaatacgcgatcgtgttctgtccgttcctgaacgacggcggc
ttgcgcgagccgcccgcatcggcgctgcccgatgcgcgcgagtatcacgacgaagcgggc
gacgcggtgctgcattacggctgcgacgacgaggccgccgcgcacgcggcgcgccaggca
ttgcgcgagcaggccgcggaacgcgcgcggctcgtgtacgtggcgctcacgcgcgcggtc
tatcgctgctatctggtcgccgggccttacctctcgtcgcgctcgacgcgcgaggcgcgg
cgcagcgtgctgaactggctcgtcgccggcgcgggccggtcgttcgatgcgtggctcggc
gagccgccggacgatgccgaactcgatgccgcatggcgcgcgctcgcgggcggcccggtc
agcgtcgcgccgctgccggcgcccgcacgccgcgagcggctgccggccggccacgatgcg
tcgcagacgctcgccgcgcgtcacgcgacgcgcgtgctgcgcgatgcgtggcggatggcg
agcttcagctcgttgactgcgtcgatcgcgcgcgaggaggccggtgtcgcaccggtgccg
gacgacgaattacggccggaccacgacgcgctcgcggcgctcgtgccgggcgccgacatc
ggtgcggcggcgaccgtcgcgccggaaccgcccgacgacgatattctcgtctttccgcgc
ggcgcggcggccggcgagtgcctgcaccggctgttcgagttgagccgtttcgcggagccc
gcatcgtggcccgccgctgcgctcggcgcgttgcacgatcgtcccgtcgaagccgagccc
gcgcttgccgagcggctgccggcgatgatggtgcggctcgtcgacgacgtcgtgcatacc
gagctcgttcccgggctgcggctcgccgatctcgatccgtcgaagcggctgaacgaaatg
ggcttcctgtttcccgcgccgtcgctcgatctcggcgcgctgcgccggctgctcgtcacg
cacggctatccggacgtcgcgctggacgcgggcacgctcgccggtttcatcaaaggtttc
atcgacatgatcgtcgaacatgacggccgcttctggatcgtcgactggaagtcgaaccat
ctcggcacgacgcccgatgcatacggcccgcaggcactcgacgccgcgatggccgatcat
gcttatcacctgcaggcgctgctctatacggtcgcgctgcatcgctatctgcgcacgcgg
cttgccggctacgactacgatcggcacatcgccgggtatctgtacctgttcgtgcgcggc
gtgcggcccgattggcgcagcggcggcgcaccggccggcgtgcatgcgcggcgcccggcg
cgcgagctcgtcgacgcgctcgaccggatgatggaagggggggcggcatga
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