Burkholderia multivorans ATCC BAA-247: NP80_1889
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Entry
NP80_1889 CDS
T03881
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
bmul
Burkholderia multivorans ATCC BAA-247
Pathway
bmul03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bmul00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NP80_1889 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bmul03021
]
NP80_1889 (rho)
03019 Messenger RNA biogenesis [BR:
bmul03019
]
NP80_1889 (rho)
Transcription machinery [BR:
bmul03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
NP80_1889 (rho)
Messenger RNA biogenesis [BR:
bmul03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
NP80_1889 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
NACHT
OB_RNB
S1CSD-TOTE-2
ATPase_2
AAA_25
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AJY18167
LinkDB
All DBs
Position
1:2032030..2033292
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AA seq
420 aa
AA seq
DB search
MHLSELKSLHVSELIEMANGLEIENANRLRKQELMFAILKKRAKTGETIFGDGTLEVLPD
GFGFLRSPEMSYLASTDDIYISPSQIRRFNLHTGDTIEGEVRTPKDGERYFALVKVDKVN
GQPPEASKHKIMFENLTPLHPNKPLSLEREMRGEENVTGRIIDMIAPIGKGQRGLLVASP
KSGKTVMLQHIAHAIKQNHPDVILFVLLIDERPEEVTEMQRSVAGEVIASTFDEPATRHV
QVAEMVIEKAKRLVEMKHDVVILLDSITRLARAYNTVIPASGKVLTGGVDANALQRPKRF
FGAARNIEEGGSLTIIGTALIETGSRMDDVIYEEFKGTGNMEVHLERRLAEKRVYPSINL
NKSGTRREEMLIKPDILQKIWVLRKFIHDMDEVEAMEFLLDKIRQTKSNSEFFDLMRRGG
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgcatttatccgagctcaagtctctgcacgtctccgaactgatcgaaatggccaacggc
ctcgagatcgaaaacgcgaaccgcctgcgcaagcaggagctgatgttcgccattctcaaa
aagcgcgccaagacgggagagacgatcttcggcgacggcacgctcgaagtgctgccggac
ggcttcggcttcctccgctcgccggaaatgtcgtacctcgcgagcaccgacgacatctac
atcagcccgtcgcagatccgccgcttcaacctgcacaccggcgacacgatcgaaggcgaa
gtccgcacgccgaaggacggcgagcgctacttcgcgctcgtgaaggtcgacaaagtcaac
gggcagccgcccgaggcctcgaaacacaagatcatgttcgagaacctcacgccgctgcac
ccgaacaagccgctgtcgctcgagcgcgaaatgcgcggcgaggaaaacgtcacgggccgc
atcatcgacatgatcgcgccgatcggcaagggccagcgcggcctgctcgtcgcatcgccg
aagtcgggcaagaccgtgatgcttcagcacatcgcgcatgcgatcaagcagaaccatccc
gacgtgatcctgttcgtgctgctgatcgacgagcgtcccgaagaagtgaccgaaatgcag
cgctcggtcgcgggcgaagtgatcgcgtcgacgttcgacgaaccggccacgcgtcacgtg
caggtcgccgaaatggtgatcgagaaggccaagcgtctcgtcgaaatgaagcatgacgtc
gtgatcctgctcgactcgatcacgcgtctcgcacgcgcctacaacaccgtgatcccggcg
tcgggcaaggtgctgacgggcggtgtcgacgcgaacgcgctgcagcgtccgaagcgcttc
ttcggcgcggcgcgcaacatcgaggaaggcggctcgctgacgatcatcggcaccgcgctg
atcgaaaccggcagccgcatggacgacgtcatctacgaagagttcaagggcaccggcaac
atggaagtgcacctcgagcgccgtctcgcggaaaagcgcgtctatccgtcgatcaacctg
aacaagtcgggcacgcgccgcgaggaaatgctgatcaagccggacatccttcagaagatc
tgggtgctgcgcaagttcatccacgacatggacgaagtcgaggcgatggaattcctgctc
gacaagatccgccagacgaagagcaactccgagttcttcgatctgatgcgccgcggcggc
taa
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