Burkholderia multivorans ATCC BAA-247: NP80_2437
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Entry
NP80_2437 CDS
T03881
Name
(GenBank) DEAD/DEAH box helicase family protein
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
bmul
Burkholderia multivorans ATCC BAA-247
Pathway
bmul03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bmul00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NP80_2437
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bmul03019
]
NP80_2437
Enzymes [BR:
bmul01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
NP80_2437
Messenger RNA biogenesis [BR:
bmul03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
NP80_2437
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
ERCC3_RAD25_C
RPC3_helical
Motif
Other DBs
NCBI-ProteinID:
AJY17718
LinkDB
All DBs
Position
1:complement(2604027..2605490)
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AA seq
487 aa
AA seq
DB search
MSDSVAKPVDATFDQFGLAADILKAIAEQGYTTPTPIQAQAIPVVLAGRDVMGAAQTGTG
KTASFSLPIIQRLLPQANTSASPARHPVRALILTPTRELADQVAANVHAYAKHTPLRSAV
VFGGVDMNPQMAELRRGVEILIATPGRLLDHVQQKTANLGQVQILVLDEADRMLDMGFLP
DLQRILNLLPKERQTLLFSATFSPEIKKLASTYLRNPQTIEVARSNSTNANVTQIVYDVA
EGDKQAAVVQLLRDRGLKQVIVFCNSKIGASRLARQLERDGVVASAIHGDKSQLERMQAL
DAFKRGEIEALVATDVAARGLDIAELPAVINFDLPFNAEDYVHRIGRTGRAGATGDALSL
CSPNERKQLADIEKLIKRPLEMQTLVLDKPARHRHEERGGERGGERGGRRDRDEHRGASG
RRSPGAERGHHRRHEPPVDDFFLKPYEPSAPAKQAEDAKPAQPEKKTPKRQVAALLGGFG
MPRKPTS
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgtccgattctgtcgccaagcctgtcgacgccaccttcgatcaattcggccttgccgcc
gatatcctgaaagccattgcggagcagggctatacgacgccgacgccgatccaggcgcag
gccattccggtcgtgctcgccggccgcgacgtcatgggcgccgcgcaaacgggcaccggc
aagaccgcgagcttctcgctgccgatcatccagcgtctgctgccgcaggcgaacacgagc
gcgtcgcccgcgcgccaccccgtgcgtgcgctgatcctcacgccgacgcgcgaactcgcc
gaccaggtcgccgcgaacgtgcacgcatacgccaagcacacgccgctgcgcagcgcggtc
gtgttcggcggcgtcgacatgaacccgcagatggcggaactgcgccgcggcgtcgagatc
ctgatcgcgacgccgggccgtctgctcgaccacgtgcagcaaaagaccgcgaacctcggc
caggtacagattctcgtgctcgatgaagcggaccggatgctcgacatgggctttctgccc
gacctgcagcgcatcctgaacctgctgccgaaggagcgtcagacgctgctgttctcggcg
acgttctcgcccgaaatcaagaagcttgcgtcgacgtacctgcgcaacccgcagacgatc
gaagtcgcgcgcagcaattcgacgaacgcgaacgtcacgcagatcgtctacgacgtcgcc
gaaggcgacaagcaggcggcggtcgtgcaactgctgcgcgatcgcggcctcaagcaggtg
atcgtattctgcaacagcaagatcggcgcgagccggctcgcgcgtcagctcgaacgcgac
ggcgtggtcgcatcggcgatccacggcgacaagtcgcagctcgagcggatgcaggcgctc
gacgcgttcaagcgcggcgagatcgaggcgctcgtcgcgaccgacgtggccgcgcgcggt
ctcgacatcgcggaactgccggccgtgatcaacttcgatctgccgttcaacgcggaagac
tacgtgcaccggatcggccgcacgggccgtgcgggcgcgaccggcgacgcgctgtcgctg
tgcagcccgaacgagcgcaagcagctcgccgatatcgagaaactgatcaagcgtccgctc
gagatgcagacgctcgtgctcgacaagccggcgcgccatcgtcatgaagagcgcggcggt
gaacgcggcggcgagcgcggcgggcggcgcgatcgcgacgagcatcgcggcgcgtcgggc
cgccggtcgcccggtgcggagcgtgggcatcatcgccgccacgagccgccggtcgacgat
ttcttcctcaagccgtacgagccgtcggcgccggccaagcaggccgaagacgcgaagccg
gcgcagcccgagaagaagacgccgaagcgtcaggttgccgcgttgctcggcgggttcggc
atgccgcgcaagccgacgagctga
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