Burkholderia multivorans ATCC BAA-247: NP80_2806
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Entry
NP80_2806 CDS
T03881
Name
(GenBank) DEAD/DEAH box helicase family protein
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
bmul
Burkholderia multivorans ATCC BAA-247
Pathway
bmul03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bmul00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NP80_2806
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bmul03019
]
NP80_2806
Enzymes [BR:
bmul01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
NP80_2806
Messenger RNA biogenesis [BR:
bmul03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
NP80_2806
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
HI1480
Ric8
P-loop_SecA
DegT_DnrJ_EryC1
Cas3-like_C_2
Sacchrp_dh_NADP
AAA_22
ERCC3_RAD25_C
CARD_2
Motif
Other DBs
NCBI-ProteinID:
AJY17807
LinkDB
All DBs
Position
1:2994825..2996243
Genome browser
AA seq
472 aa
AA seq
DB search
MSFESLGLAEPLVKAVNELGYTSPTPIQQQAIPAVLGGGDLLAGAQTGTGKTAGFTLPIL
QRLHTFYTEHRSARRAVRALILTPTRELAAQVEESVRAYSKYLKLRSTVMFGGVSINPQI
DALKRGVDIVVATPGRLLDHMQQKTIDLSDLDILVLDEADRMLDMGFIHDIKRVLAKLPP
RRQNLLFSATFSDEIKALADSLLDSPALIEVARRNTTAETVAQKIHPVDRDRKRELLTHL
IREHNWFQVLVFTRTKHGANRLAEQLTKDGISAMAIHGNKSQSARTRALAEFKNNTLQVL
VATDIAARGIDIDQLPHVVNFDLPNVPEDYVHRIGRTGRAGATGEAVSLVCVDEKQLLRD
IERLIKREIPREVIAGFEPDPNAKPEPIQQRRGQQPRGGGGNGGGGGGNRAPRAGGAAQQ
PGAKRDGQAPKPKAAAKPRPQGGGNGNGARPSNGNAAHPNRNRSSRSGQRGH
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgtctttcgaatctctcggcctggccgaaccgctcgtcaaggcggtcaacgagctcggc
tacacgtcgccgaccccgatccagcagcaggccattcctgcagtcctcggcggcggcgat
ctgctcgccggcgcgcagaccggcaccggcaaaaccgcaggcttcacgctgccgatcctg
cagcgcctgcacacgttctacaccgagcatcgcagcgcaaggcgcgccgtgcgcgcactg
atcctcacgccgacgcgcgaactcgccgcccaggtcgaggaaagcgtgcgtgcgtacagc
aagtatctgaaactgcgctcgaccgtgatgttcggcggcgtcagcatcaatccgcagatc
gatgcgctcaagcgcggcgtcgacatcgtcgtcgcgacgcctggccgcctgctcgatcac
atgcagcaaaagacgatcgacctgtcggatctcgacatcctcgtgctcgacgaagccgac
cggatgctcgacatgggcttcatccacgacatcaagcgcgtgctcgcgaagctgccgccg
cggcgccagaacctgctgttctccgcgacgttctccgacgagatcaaggcgctcgccgac
agcctgctcgattcgccggcgctgatcgaggtcgcgcgccgcaacacgaccgccgagacg
gtcgcgcagaagatccatccggtcgaccgcgatcgcaagcgcgaactgctcacgcatctg
atccgcgagcacaactggttccaggtgctcgtcttcacgcgcacgaagcacggcgcgaac
cggctcgcggaacagctgaccaaggacggcatcagcgcgatggcgatccacggcaacaag
agccagtcggcccgcacgcgcgcgctcgccgagttcaagaacaacacgctgcaggtgctc
gtcgcgaccgacatcgccgcgcgcgggatcgacatcgatcagctgccgcacgtcgtcaac
ttcgatctgccgaacgtgcccgaggattacgtgcaccgcatcggccgcacgggtcgcgca
ggcgcgaccggcgaagccgtgtcgctcgtgtgcgtcgacgagaagcagttgctgcgcgac
atcgaacggctgatcaagcgcgagattccgcgtgaagtgatcgcgggcttcgagcccgat
ccgaatgcgaagccggagccgatccagcagcgtcgcggccagcagccgcgcggcggtggc
ggcaatggcggcggcggtggcggcaatcgcgcgccgcgcgccggcggcgccgcccagcag
cccggcgcgaagcgcgacggccaggcaccgaagccgaaggcggccgcaaagccgcgcccg
cagggcggcgggaacggcaacggcgcgcgtccgtcgaacggcaacgccgcgcacccgaac
cgcaatcgttcgtcacgcagcggccagcgcggtcactga
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