Burkholderia multivorans ATCC BAA-247: NP80_3854
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Entry
NP80_3854 CDS
T03881
Symbol
rpoD
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
bmul
Burkholderia multivorans ATCC BAA-247
Pathway
bmul02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
bmul00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
NP80_3854 (rpoD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bmul03021
]
NP80_3854 (rpoD)
Transcription machinery [BR:
bmul03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
NP80_3854 (rpoD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_ner
Sigma70_r3
Sigma70_r1_1
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
GSH-S_ATP
Motif
Other DBs
NCBI-ProteinID:
AJY16260
LinkDB
All DBs
Position
2:735164..737212
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AA seq
682 aa
AA seq
DB search
MTKKLNEVSVDDDANQSDEQPAAAAAPGKSKARDRRAKEKALLKEAFATSTPGTAEELEE
RRVKLRALIKLGKERGFLTYAEINDHLPDNFTETEALEGIIGTFNDMGVAVYEQAPDAET
LLLNDNAPAASSDDEVEEEAEVALSTVDSEFGRTTDPVRMYMREMGTVELLTREGEIEIA
KRIEDGLRHMVMAISACPTTIADILAMAERVANDEIRVDELVDGLLDPNASDTDTDGFSA
KEAEEIENEDEEVEEEEEEEEEEDDDGAAQATANAAQLEALKRASLEKFALISEWFDKMR
RAFEKEGYKSKSYLKAQETIQSELMTIRFTARTVERLCDTLRAQVDEVRQVERQILHIVV
DKCGMPRSEFIARFPGNETDLDWAEKIAAEGHSYSAILSRNIPAIREQQQRLLDLQARVV
LPLKDLKETNRQMAAGELKARQAKREMTEANLRLVISIAKKYTNRGLQFLDLIQEGNIGL
MKAVDKFEYRRGYKFSTYATWWIRQAITRSIADQARTIRIPVHMIETINKMNRISRQILQ
ETGLEPDPATLAEKMEMPEDKIRKIMKIAKEPISMETPIGDDDDSHLGDFIEDTNTVAPA
DAALHASMRDVVKDVLDSLTPREAKVLRMRFGIEMSTDHTLEEVGKQFDVTRERIRQIEA
KALRKLRHPSRSDKLKSFLEGN
NT seq
2049 nt
NT seq
+upstream
nt +downstream
nt
atgacgaaaaagctgaacgaagtatccgtcgatgacgacgcaaatcagagcgacgagcag
cccgcagcggcggctgcgccgggcaagtccaaggcgcgcgaccgccgcgccaaggaaaag
gcgctgctgaaggaagcgttcgcgacgagcacgcccggcacggccgaggagctcgaagag
cgccgcgtgaagctgcgcgcgctgatcaagctcggcaaggagcgcggcttcctcacgtac
gccgaaatcaacgaccacctgccggacaacttcaccgagaccgaagccctcgaaggcatc
atcggcacgttcaacgacatgggcgtggcggtttacgagcaggcgccggacgcggaaacg
ctgctcctgaacgacaacgcgccggccgcgtcgtcggacgacgaagtcgaagaggaagcg
gaagttgcgctgtccaccgtcgattccgaattcggccgcacgaccgatcctgtgcggatg
tacatgcgcgagatgggcaccgtcgagctgctcacgcgtgaaggtgaaatcgagatcgcg
aagcgtatcgaagacggcctgcgtcacatggtaatggccatctctgcatgcccgacgacg
atcgccgacatcctcgcgatggcggagcgcgtcgcgaacgacgagattcgcgtcgacgag
ctcgtcgacggcctgctcgatccgaacgcttcggacaccgacacggacggtttctccgcg
aaggaagcggaggagatcgagaacgaggacgaagaggtcgaagaggaagaggaagaagag
gaagaggaggacgatgacggcgccgcgcaggcgaccgccaacgccgcccagctcgaagcg
ctgaagcgtgcctcgctcgagaagttcgcgctgatcagcgagtggttcgacaagatgcgc
cgcgcgttcgagaaggaaggctacaagtcgaagtcctacctgaaggcgcaggaaacgatc
cagagcgagctgatgacgatccgcttcaccgcgcgtacggtcgagcgcctctgcgacacg
ctgcgtgcgcaggtggacgaagtgcgccaggtcgagcgtcagatcctgcacatcgtcgtc
gacaagtgcgggatgccgcgttcggaattcatcgcgcgcttcccgggcaacgagacggac
ctcgactgggccgagaagattgcggccgaaggtcattcgtacagcgcgatcctgtcgcgc
aacatcccggcgatccgcgaacagcagcagcgcctgctcgatctgcaggcgcgcgtcgtg
ctgccgctgaaggacctgaaggaaaccaaccgccagatggcggccggcgaactgaaggcg
cgtcaggcgaagcgcgaaatgaccgaggcgaacctgcgtctcgtgatctcgatcgcgaag
aagtacacgaaccgcggcctgcagttcctcgacctgatccaggaaggcaacatcggcctg
atgaaggcggtggacaagttcgaataccgtcgcggctacaagttctcgacgtatgcgacg
tggtggattcgtcaggccatcacgcgctcgatcgcggaccaggcgcgcacgatccgtatt
ccggttcacatgatcgagacgatcaacaagatgaaccgcatctcgcggcagattctgcag
gaaaccggtctcgagccggatccggcgacgctggccgagaagatggagatgccggaagac
aagatccgcaagatcatgaagatcgcgaaggagccgatctcgatggaaacgccgatcggc
gacgacgacgattcccatctcggcgacttcatcgaggacaccaacacggtcgcgccggcg
gatgccgcgctgcatgcgagcatgcgcgacgtcgtgaaggacgtgctcgattcgctgacg
ccgcgcgaggcgaaggtgctgcggatgcgtttcggtatcgaaatgagcaccgatcacacg
ctcgaggaagtcggcaagcagttcgacgtcacgcgcgagcggatccgtcagatcgaggcc
aaggcgctgcgcaagctgcgtcacccgagccgttcggacaagctgaagtcgttcctcgaa
gggaactga
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integrated database retrieval system
