Peribacillus muralis: ABE28_001355
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Entry
ABE28_001355 CDS
T05340
Name
(GenBank) ATP-dependent RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
bmur
Peribacillus muralis
Pathway
bmur03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bmur00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ABE28_001355
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bmur03019
]
ABE28_001355
03009 Ribosome biogenesis [BR:
bmur03009
]
ABE28_001355
Enzymes [BR:
bmur01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
ABE28_001355
Messenger RNA biogenesis [BR:
bmur03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
ABE28_001355
Ribosome biogenesis [BR:
bmur03009
]
Prokaryotic type
rRNA helicases
ABE28_001355
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Motif
Other DBs
NCBI-ProteinID:
AOH53001
UniProt:
A0A1B3XII5
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All DBs
Position
277924..279423
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AA seq
499 aa
AA seq
DB search
MTLFSELGLDRTSMKSIEKMGFEEASPIQSQTIPLALEGKDIIGQAQTGTGKTAAFGIPL
MENIDISNENVQGIVIAPTRELAIQVSEELFKLGYGKRARVLAVYGGQDIDRQIRALKKK
PHIIVGTPGRLLDHIKRKNIKLGGVHTVVLDEADEMLNMGFIEDIESILSTVPDERQTLL
FSATMPDPIRKIAERFMHEPVLVRVKAKEMTVDRIEQYYLELKESEKFDTLARLFDIQTP
DLAIVFGRTKRRVDELASALNIRGYMAEGIHGDLSQAKRLSVLKKFKDRSIDVLVATDVA
ARGLDISGVTHVYNFDIPQDPESYVHRIGRTGRAGKHGIAITFVTPRERGQLHAVEHTTK
KRMEKLKTPTLTEALEGQQKAVTEKILSTIENDDLTLYLGQAEDLLQKHSAADLVAAMLK
SMTKEPDQTPIKLTEESPSPMRRNRGGSSSSNNRQRNGRSSSGRKDYGSGSNKRPSSNRK
SNGYGNRSTSQKREKSNKI
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
ttgactttgtttagcgaattaggattagatagaacgtctatgaaatcaatagaaaaaatg
ggattcgaagaagcaagccctattcagtcccaaacgattcctctagcacttgaaggtaaa
gatatcatcggtcaagcgcagacgggaacaggtaaaacggcagcattcggcatccctttg
atggagaatatcgatattagcaatgaaaacgtgcaaggaatcgtcatcgcgcctacacgt
gagcttgccattcaagtttctgaagaacttttcaagcttggttacggaaagcgcgctcgt
gttttagcggtttacggtggacaagacatcgaccgtcaaatccgtgcactgaagaaaaaa
ccacatattatcgttggtacacctggtcgtcttttagaccatatcaaacgtaaaaacatt
aaattgggcggagttcataccgtagttcttgatgaagcggatgaaatgcttaacatggga
ttcattgaggatatcgaatcaatcctttcgacggttcctgatgaaaggcaaacattgctt
ttctcagcgacaatgcctgatccaatccgtaaaattgctgaaagattcatgcatgagcca
gttcttgtacgtgtaaaagcgaaagaaatgacagtggatcgcatcgagcaatattacttg
gaactaaaagaaagtgaaaaattcgatacactagctcgcctttttgacattcaaacaccg
gatcttgcgattgtcttcggacgtacgaagcgccgtgtcgatgaattggcttctgccttg
aatattcgcggctatatggctgagggaattcatggtgaccttagccaggctaaacgtctt
tccgtattgaaaaaattcaaagaccgcagcatcgatgtactcgttgctactgatgtagct
gctcgtggtctggatatttccggcgtaacacacgtatataactttgatatccctcaagat
cctgaaagctatgttcaccgtattggacgtacaggtcgtgcgggtaaacacggtattgcg
attacatttgtaacaccaagagaaagaggtcaactgcatgcagttgaacatacaacgaaa
aaacgtatggaaaaacttaaaactcctacattgactgaagctttggaaggtcaacaaaaa
gcggttactgaaaaaatcctttccacaatcgagaatgatgatttaacattatatcttggt
caagcggaagatttattgcaaaagcacagtgcggcggacctagtggcagccatgcttaaa
tcaatgacgaaagaaccggaccaaacgccgatcaagttaaccgaagaatctccatctcca
atgcgtcgcaatcgcgggggaagcagttcttccaacaacagacagcgcaatggccgcagt
tcttcaggcagaaaagattacggcagcggatcaaacaaacgcccaagttcaaaccgtaaa
tccaatggttacggtaatcgcagcacaagccaaaaaagagaaaaatcaaataaaatataa
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