Peribacillus muralis: ABE28_008335
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Entry
ABE28_008335 CDS
T05340
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
bmur
Peribacillus muralis
Pathway
bmur03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bmur00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ABE28_008335
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bmur03019
]
ABE28_008335
Messenger RNA biogenesis [BR:
bmur03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
ABE28_008335
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Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KH_KhpA-B
KH_2
ASLyase_C
Neur_chan_memb
DUF4407
Motif
Other DBs
NCBI-ProteinID:
AOH54361
UniProt:
A0A1B3XMC7
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Position
1729082..1730641
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AA seq
519 aa
AA seq
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MEPMTIIFTLLGLIVGAVVGYFIHKSKFESKIAGAKGSAEHILEDAKREADALKKEALLE
AKDEIHKIRSDSDRESRERRNELQKQENRLLQREENLDRKDDTLDKRENLLEKKEDSLNQ
RQQHIEEMESKVDETVRKQQTELERVSGLTREEAKAIIIDRMENELAHDVALMIKESDTR
AKEEADKKAKEVLSLAIQRCAADHVAETTVSVVNLPNDEMKGRIIGREGRNIRTLETLTG
IDLIIDDTPEAVILSGFDPIRRETARLALEKLVQDGRIHPARIEEMVDKARREVDEHIRE
IGEQTTFEVGVHGLHPDLIKILGRLKFRTSYGQNVLKHSIEVAQLSGLLAAELGEDEVLA
RRAGLLHDIGKAIDHEVEGSHVEIGVELATKYKEHPTVINSIASHHGDTEPTSIISVLVA
AADALSAARPGARSETLENYIRRLEKLEEISESYDGVEKSFAIQAGREVRILVKPEQIDD
LSAHRLARDIRKRIEEELDYPGHIKVTVIRETRAVEYAK
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atggaacccatgacaatcatcttcactttgcttggcctaatcgtcggtgcagttgttggc
tattttattcacaaatcaaaatttgagagtaaaatagcaggggcaaagggctctgcagaa
cacatccttgaggatgcaaaacgtgaagcggatgcacttaagaaagaagccttgttggaa
gcaaaagatgaaattcataaaattcgttcagattctgatcgggaatcccgtgaaagaagg
aatgaattacaaaaacaagaaaatcggttattgcaaagagaagagaatctggaccgtaag
gacgatacgttagataaacgtgaaaaccttttggagaaaaaagaagattctctaaaccaa
agacaacagcatattgaagagatggaaagcaaagtggacgaaacggttcgtaagcagcaa
acggagctagaacgagtttcaggtttaactcgtgaagaagctaaagcaatcatcatagac
cgaatggaaaacgagcttgctcacgatgtagcgcttatgattaaagaaagtgatacccgt
gccaaagaagaagctgataaaaaggcaaaagaagttctttctcttgcaattcagcgttgt
gcggctgatcatgttgcagaaaccaccgtttctgtagtgaatcttccaaacgatgaaatg
aaaggacggataattggacgtgaaggacgaaatatccggacgctagaaacgctaacaggt
atagacctaataattgatgatactcctgaagctgtcattttatctggatttgatccgatt
agacgcgaaacggcacgcttggctcttgaaaaacttgttcaggacggacggatacatccg
gctcgaattgaagaaatggttgacaaagcaagacgtgaggtagatgaacatattcgtgaa
attggtgaacaaacgactttcgaggttggtgttcacggtctccatccagaccttatcaaa
atactgggtcgtttgaaattccgtacaagttacggacaaaacgtgcttaagcattcaatt
gaagtggcccagctttcagggttgctggccgctgagcttggagaggatgaagtacttgcc
cgccgtgccggtttattgcatgatatcgggaaagcgatcgatcatgaagtggaaggcagc
cacgttgaaattggcgtggaattggcaaccaagtataaagagcatcctactgtcattaac
agcatcgcttcacatcatggcgatacagagccaacttccatcatttcagtgcttgttgca
gccgctgatgcattatcagctgcaaggcctggtgccagaagtgaaacacttgaaaattac
attagaagacttgaaaagcttgaggagatttccgaatcctatgatggagtggaaaaatca
ttcgcgattcaagccggacgtgaagtgcggattctagtgaaaccagagcaaatagatgat
ctttcggcccatcgactcgcacgtgatatccggaaacggattgaagaagagcttgattac
ccaggtcatataaaagtcacggttatccgtgaaacaagagcagtcgaatacgctaaataa
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