Peribacillus muralis: ABE28_012820
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Entry
ABE28_012820 CDS
T05340
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
bmur
Peribacillus muralis
Pathway
bmur03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bmur00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ABE28_012820
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bmur03019
]
ABE28_012820
03400 DNA repair and recombination proteins [BR:
bmur03400
]
ABE28_012820
Enzymes [BR:
bmur01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ABE28_012820
Messenger RNA biogenesis [BR:
bmur03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
ABE28_012820
DNA repair and recombination proteins [BR:
bmur03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
ABE28_012820
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HTH_40
HRDC
RecQ_Zn_bind
ResIII
Helicase_Sgs1
Sigma70_r4_2
zf-CXXC
Motif
Other DBs
NCBI-ProteinID:
AOH55235
UniProt:
A0A1B3XPT2
LinkDB
All DBs
Position
complement(2644456..2646576)
Genome browser
AA seq
706 aa
AA seq
DB search
MEKAREYLQQYYGYESFRKGQEQIIEQVLKGMNTAGIMPTGGGKSICYQIPALLLPGVTL
VISPLISLMKDQVDALEQNGIDATFLNSSISGLESSKRMNDIKQGRYKLVYIAPERLENP
AFQQELFSVEISLVAIDEAHCISQWGHDFRPSYLKIKTLLKNMPAEPTVLALTATATPHV
TDDICQSLGISKEHAVSTGFSRENLFFSVVKEENRGRFLMRYIEKNKNESGIIYAATRKE
VDSLHAKLNKAGFKTGRYHAGMNEQDRSTQQDEFIRDEVSLMVATSAFGMGIDKSNVRYV
IHYQTPKNMESYYQEAGRAGRDGLDSECILLYSPQDMQIQRFLIDQSNPSQEWQAQELKK
LNKMKDYCFTEGCLQAFILRYFGEENPADCGHCENCTDKRDSVDVTTQAQMVLSCMLRMG
ERFGKTMISQVLTGSRNKKVEEFGFQQLSTYGIINNQTAKDVADFIDFLTAKQYIEMTGG
QFPVLKVTNSGREVLLGQKKVLRKEVKQVSSISVDHGLFEELRQLRKEMAAKENVPPFII
FSDASLKDMAAKLPTAEQAFLEVKGVGTQKFERFGTVFIERISRYVQAHPELEANTMITK
ETSKRSVEPSHLESYRLYQEGKSIKEIGTLRGLSSISVENHLLKCAQERLDIEWDDIFSD
EVYNLVLETALHLDSEKLKPLKEALPEHISYFMIRAIMVKAGLEER
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaagcacgtgaatatttacaacaatattatgggtatgaatcatttcgtaaagga
caggaacaaatcattgaacaggtgttaaaaggaatgaatacagcgggaatcatgcccact
gggggtggtaagtccatttgttatcaaattccggcacttttgctgcctggtgttacactc
gtgatatccccgcttatttcccttatgaaggatcaagtagatgccctcgaacaaaacgga
attgatgccacatttctgaatagctccatttcaggtttggaatcttcaaagagaatgaac
gatattaagcaaggaagatataagttggtatacattgctccggaaagactggaaaaccct
gcttttcaacaggaattatttagtgtggaaatttcattggttgccatcgatgaagctcat
tgtatctcacaatggggtcatgacttcagaccaagctatttaaaaatcaaaacattgctg
aagaacatgccggccgaaccgactgtcctggccttgacggcaaccgccacgccgcacgtg
actgacgatatatgtcagtcgcttggtatatccaaggagcatgccgtatcaacgggattc
tccagggaaaacttgtttttctccgttgtgaaggaagaaaatcgcggacgttttttaatg
cgctatatcgaaaagaataaaaatgaatcaggtatcatatatgcagcaacaaggaaagaa
gtggattcattgcatgcaaagcttaataaagctggcttcaaaaccggacgctaccacgct
gggatgaatgaacaggatcgttcaacacagcaagatgaattcattcgtgatgaagtttct
ttgatggttgcgacttcggcctttggcatgggtatcgataaatcgaatgttagatacgtc
atccattatcaaactccaaagaatatggaaagttattatcaggaagctggtcgtgcaggg
cgtgatggtttggatagtgaatgcatcctattgtattccccgcaagatatgcagattcaa
cgattcttgatcgatcagtccaacccctctcaggagtggcaagcccaagaactgaagaag
ttaaataaaatgaaggactattgctttaccgaagggtgtttacaggcctttattctgcgc
tattttggggaagaaaacccggcggattgcggtcattgcgagaactgtacagataaacgc
gattccgttgatgtaacgacccaggcacagatggttctttcatgcatgctgcgcatgggt
gaacgatttggcaagacgatgatttcacaggtgctgacaggttcacggaataagaaagtg
gaggagtttggctttcagcagctttcgacttatggaatcatcaataatcaaacggcaaag
gatgttgctgatttcattgacttcctgacagctaaacagtatatcgaaatgacgggtggg
cagttcccggtccttaaagtaaccaattccggaagggaggttcttttgggacaaaaaaaa
gtacttcggaaagaagtgaagcaagttagcagcatcagtgtggatcatgggttatttgaa
gaactgcggcaactaagaaaagaaatggctgctaaggaaaatgtcccgccattcattatt
ttttccgatgcttccttaaaggatatggctgcaaaactgccaacagcggaacaggcattc
ctggaagtcaaaggggtgggcacccagaaatttgaacgcttcggcaccgtgttcatagaa
aggatttcccgatatgtacaggcacaccctgaacttgaggcgaatacaatgattactaaa
gaaacaagtaagcgaagcgtggaaccgtcacacctggaaagctatcgcttgtaccaagag
ggaaaatcaataaaagaaattggaaccttgagagggctgtcttcgatatccgtcgaaaat
catttattaaagtgtgctcaagagcgcttggacattgaatgggacgatatattctcggat
gaagtgtacaatctcgttttggaaacggcgttacacttggattccgaaaaacttaaaccc
ctgaaagaagcactgcctgaacatatttcatatttcatgattagagcgatcatggtgaaa
gcagggttagaagaaagatga
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