Peribacillus muralis: ABE28_014440
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Entry
ABE28_014440 CDS
T05340
Name
(GenBank) hypothetical protein
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
bmur
Peribacillus muralis
Pathway
bmur03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bmur00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ABE28_014440
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bmur03019
]
ABE28_014440
03400 DNA repair and recombination proteins [BR:
bmur03400
]
ABE28_014440
Enzymes [BR:
bmur01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ABE28_014440
Messenger RNA biogenesis [BR:
bmur03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
ABE28_014440
DNA repair and recombination proteins [BR:
bmur03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
ABE28_014440
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
RecQ_Zn_bind
Cas3-like_C_2
HEM4
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AOH55554
UniProt:
A0A1B3XQR6
LinkDB
All DBs
Position
complement(2977355..2978866)
Genome browser
AA seq
503 aa
AA seq
DB search
MNIKHFLKMKFGFDEFRPGQKEVIESLMSGHHTLAMLPTGSGKSLCYQLPAYLLNKTVLI
VSPLLSLMQDQADQLKMNGEKSVLTLNSFLTMNQKRMAFDRLHRYRFIFLSPEMLSLEGV
IQSLKSIDIGLFVIDEAHCISQWGYDFRPDYLNLGEVRRELNDPLTLALTATATNEVRQD
IVSKLNIGQAKEIVSSVDRENITILIERIHSYEEKQYRLLELVKEFTGSGIIYFSSKRVA
EAVTGFLQENGVDSVNYYHGGMEQEQRMLIQQQFISGQLKVICATSAFGMGVNKADVRYV
IHFHMPSTMEAYLQEIGRAGRDQKQSVAILLYNDGDEGLPLHLMEQQLPTDNQIEGVCSY
LGATGMTLATCTLTEKEHLSQSYSLNEVQLRFFIQLIVATANPLHQVAEMKEYCRKRKFA
NQEKLQKFLNWIRAKECRRTGVLAYFDEEQQAVNPQCCDNCGMDAKKMEELWPDVKLEHV
NSFSTWKEELAFILLKKENGHEK
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atgaatatcaaacatttccttaaaatgaaattcggctttgacgaattccgaccgggacaa
aaagaagtgattgaatccttgatgtccggccaccatacattggcgatgctgcccaccgga
tccggtaaatcgctatgctatcagctgcctgcttatcttttgaataagaccgtcctcatt
gtttccccattattatcattaatgcaggatcaggcagatcagttgaaaatgaatggggaa
aaaagtgttttgacgctcaattcctttttgacgatgaatcaaaaaagaatggcattcgat
cggctacataggtaccggtttatctttttatcacctgaaatgcttagccttgaaggtgtg
atccaatccttgaaatcaatcgatataggtttgttcgtcatagatgaagcccattgcatc
tcgcaatggggctatgatttccgtcccgattatttgaacttaggtgaagtgaggcgggag
ctgaacgatccgctgacgctagctctgactgcgaccgcaacgaatgaagtcaggcaggac
atcgtaagtaaactcaacatcggacaagcgaaggaaatcgtttcgtccgttgaccgtgaa
aatattacgatattaatagaacgtatccacagctatgaagagaagcaatatcgcttattg
gaacttgtcaaggaatttaccggcagtggaatcatttatttttcatctaaacgagtggct
gaggcagtcactggttttttacaggaaaatggagtggatagtgtcaattattatcacggt
gggatggaacaggaacaaaggatgctgattcagcagcaattcatttccggtcagctgaaa
gtgatctgtgcgacaagtgccttcggtatgggggtaaataaagcggatgtcagatatgtg
attcattttcatatgccttcgacaatggaagcatatcttcaggaaataggcagagcggga
agggatcagaagcaaagcgtggccattttactatataatgatggcgatgaagggcttccc
ctgcatttgatggagcaacaattgcctacagataatcaaattgaaggggtttgttcgtac
ttgggagctacaggcatgactctagcgacttgcacccttacggaaaaagaacatctgtcc
caatcgtattccttgaacgaagtccagcttcgttttttcattcaactcattgtagccact
gcaaatccgttacaccaagtggcggagatgaaggaatattgccgtaaacgaaagtttgcg
aatcaagaaaagctgcaaaaattcctgaattggatccgtgcaaaggaatgccgccgcacg
ggagtactggcctattttgatgaagagcagcaagcagtgaacccgcaatgctgtgataac
tgcgggatggacgctaaaaaaatggaagagctatggcctgatgtcaagcttgaacacgtt
aattccttttccacatggaaagaggaactggctttcatcttattgaagaaggaaaatggg
catgaaaaataa
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