Balaenoptera musculus (blue whale): 118880205 Help Entry 118880205         CDS       T09887                                  Symbol COL11A1 Name (RefSeq) collagen alpha-1(XI) chain   KO K19721   collagen type V/XI/XXIV/XXVII, alpha Organism bmus  Balaenoptera musculus (blue whale) Pathway bmus04820   Cytoskeleton in muscle cells bmus04974   Protein digestion and absorption Brite KEGG Orthology (KO) [BR:bmus00001]  09140 Cellular Processes   09142 Cell motility    04820 Cytoskeleton in muscle cells     118880205 (COL11A1)  09150 Organismal Systems   09154 Digestive system    04974 Protein digestion and absorption     118880205 (COL11A1)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:bmus00536]     118880205 (COL11A1) Glycosaminoglycan binding proteins [BR:bmus00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    118880205 (COL11A1) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Collagen COLFI Laminin_G_2 Laminin_G_3 Laminin_G_1 Motif Other DBs NCBI-GeneID:  118880205 NCBI-ProteinID:  XP_036679617 UniProt:  A0A8C0CFI1 LinkDB All DBs Position 1:complement(90613258..90821407) Genome browser AA seq 1805 aa AA seqDB search MERWSSRWKTKRWLWDFTITTLALTFLFQAREVRGAAPVDVLKALDFHSSPEGISKTMGF CTNRKNSKGSDTAYRVSKQAQLSAPTKQLFSGGTFPEDFSILFTVKPKKGIQSFLLSIYN EHGIQQIGVEVGRSPVFLYEDHTGKPAPEDYPLFRTVNIADGKWHRVAISVEKKTVTMIV DCKMKTTKPLDRSERAIVDTSGITVFGTRILDEEVFEGDIQQFLIIGDPKAAYDYCEHYS PDCDSSAPKAAQAQEPQIDEYAPEDIMEYDYEYGEAEYKEAESVTEIPTVTEETIAQTEA NIVDDFQEYNYGTESYQTEAPRRVSGQNEPNPVEEVFTEEYLTGEDYDSQRKNSEDMLYE NKEIDGRDSDLLVDGDLGEYDFYDYKEYEDKPTSPTNEEFGPGVPAETDITETSINGHGA YGEKGQKGEPAVVEPGMLIEGPPGPAGPAGIMGPPGLQGPTGPPGDPGERGPPGRPGLPG ADGLPGPPGTMLVLPFRYGGDGSKGPIISAQEAQAQAILQQARIALRGPPGPMGLTGRPG PVGGPGSSGAKGERGDPGPQGPRGVQGPPGPIGKSGKRGRPGADGGRGMPGEPGAKGDRG FDGLPGLPGDKGHRGERGPQGPPGPPGEDGMRGEDGEIGPRGLPGEAGPRGLLGPRGTPG PTGQPGIAGVDGPPGPKGNMGPQGEPGPPGQQGNPGPQGLPGPQGPIGPPGEKGPQGKPG LGGLPGADGPPGHPGKEGQSGEKGSLGPPGPQGPIGYPGPRGVKGADGVRGLKGSKGEKG EDGFPGFKGDMGLKGDRGEVGQVGPRGEDGPEGPKGRAGPTGDPGPSGQAGEKGKLGVPG LPGYPGRQGPKGSTGFPGFPGANGEKGARGVAGKPGPRGQRGPTGPRGSRGARGPTGKPG PKGTSGGDGPPGPPGERGPQGPQGPVGFPGPKGPPGPPGKDGLPGHPGQRGETGFQGKTG PPGPGGVVGPQGPTGETGPIGERGHPGPPGPPGEQGLPGAAGKEGAKGDPGPQGVSGKDG PAGLRGFPGERGLSGAQGAPGLKGGEGPQGPPGPVGSPGERGSAGTAGPIGLPGRPGPQG PPGPAGEKGAPGEKGPQGPAGRDGVQGPVGLPGPAGPAGSPGEDGDKGEIGEPGQKGSKG DKGENGPPGPPGLQGPVGAPGIAGGDGEPGPRGQQGMFGQKGDEGARGFPGPPGPIGLQG LPGPPGEKGENGDVGPMGPPGPPGPRGPQGPNGADGPQGPPGSIGSVGGVGEKGEPGEAG NPGPPGEAGTGGPKGERGEKGEAGPPGAAGPPGVKGPSGDDGPKGNPGPVGFPGDPGPPG EPGPAGQDGVGGDKGEDGDPGQPGPPGPSGEAGPPGPPGKRGPPGAAGAEGRQGEKGAKG EAGAEGPPGKTGPVGPQGPAGKPGPEGLRGIPGPVGEQGLPGAAGQDGPPGPMGPPGLPG LKGDPGSKGEKGHPGLIGLIGPPGEQGEKGDRGLPGTQGSTGAKGDGGIPGPAGPIGPPG PPGLPGPQGPKGTKGSTGPAGQKGDSGLPGPPGPPGPPGEVIQPLPILSPKKTRRHTESM QSDAGDNILDYTDGMEEIFGSLNSLKQDIEHMKFPVGTQTNPARTCKDLQLSHPDFPDGE YWIDPNQGCSGDSFKVYCNFTSGGETCIYPDRKSEGVRISSWPKEKPRSWFSEFKRGKLL SYLDVEGNSINMVQMTFLKLLTASARQNFTYSCHQSAAWYDVSSGSYDKALRFLGSNDEE MSYDNNPYIKALYDGCASRKGYEKTVIEINTPKIDQVPIVDVMINDFGDQNQKFGFEVGP VCFLG NT seq 5418 nt NT seq  +upstreamnt  +downstreamnt atggagcggtggtcctctaggtggaaaacgaaacggtggctctgggatttcaccataaca actctcgcactgactttcctcttccaggctagagaggtcagaggagctgctccagttgat gtactaaaagctctagattttcacagttctccagagggaatatcaaaaacaatgggcttt tgcacaaacagaaagaattcaaaaggttcagatactgcttacagagtttcaaagcaagca caactcagtgccccaacaaaacagttattttcaggaggaacttttccagaggatttttca atattatttacagtaaaacccaaaaaaggaattcagtctttccttttatctatatataat gagcatggtattcagcaaattggtgtggaggttgggagatcacctgttttcctgtatgaa gaccacactggaaaacctgccccagaagactaccccctctttagaactgttaacatcgca gatggaaagtggcaccgggtagcaatcagcgtggagaagaaaactgtgaccatgattgtt gattgtaagatgaaaaccacaaaaccacttgacagaagtgagagagcaatcgttgacacc agtggaattacagtttttggaacaagaattttggatgaagaagtttttgagggggacatc cagcagttcttgatcataggtgaccccaaagcagcgtatgactactgtgagcattacagt ccagactgtgattcctcagcacccaaggctgctcaggctcaggaaccccagatcgatgag tatgcacctgaggatataatggaatatgactatgagtatggggaagcagaatataaagag gctgaaagtgtaacagaaattcccactgtaactgaggagacaatagcgcaaacagaggca aatattgttgatgattttcaagaatacaactatggaacagaaagttaccagacagaagct cctaggcgtgtatctggacaaaatgagccaaatccggttgaagaagtatttactgaagaa tatctaactggagaggattatgattcccagaggaaaaattctgaggatatgctatatgaa aacaaagaaatagacggcagggactctgatcttctggtagatggagatttaggcgaatat gatttttatgactataaagaatatgaagataaaccaacaagccccactaatgaagaattt ggtccaggtgttccagcagaaacagatatcacagaaacaagtataaatggccatggtgca tacggagaaaaaggacagaaaggagagccagcagtagttgaacctggcatgcttattgaa ggaccaccagggccagcaggacctgcgggtattatgggtcctccaggtctacaaggcccc actggaccccctggtgaccctggcgagaggggtcccccaggacgtcctggtctaccaggg gctgatggtttacctggtcctcctggtaccatgttagtgttaccgtttcgttatggtggc gatggttccaaaggaccaatcatctctgctcaggaagctcaggcccaggccattcttcag caggctcggattgctctgagaggtccacctggcccaatgggtctaactggaagaccgggt cctgtgggggggcctggttcctctggggccaaaggtgagaggggtgatccaggtcctcag ggccctcgtggtgtccaaggtcctcctggtccaataggaaaatctggaaaaaggggtcgt ccgggtgctgatggaggaagaggaatgccaggagaacctggggccaagggggatcgagga tttgatggacttccaggtctgccaggtgacaagggtcacaggggtgaacgaggtccccaa ggtcctcctggtcctcctggcgaagatggaatgcggggagaagatggagaaataggacca aggggtcttccaggtgaagctggtccacgaggtttgctaggaccaaggggaactccagga cctacaggacagcctggtatcgcaggtgtagatggacccccaggaccaaaagggaacatg ggtccccagggggagcctggacctccaggtcagcaagggaatccaggacctcaaggtctt cctggtccacaaggtccaattggtcctcctggtgaaaaaggaccacaaggaaaaccaggg cttggaggacttcctggtgctgatgggcctcctggtcatcctggaaaagaaggccagtct ggagaaaagggttctctgggtcctccgggtccgcagggtcccattggctaccctggtccc cgaggagtaaagggagcagatggtgtcagaggtctcaagggctctaaaggtgaaaagggt gaagatggttttccaggattcaaaggggacatgggtcttaaaggtgacagaggagaagtt ggtcaagtaggtccaagaggagaagatggccctgaaggccccaaaggtcgagcaggtccg accggagaccccggtccttctggtcaagcaggagagaaggggaaacttggtgttccagga ttaccgggatatccaggaagacaaggtccaaagggttccactggatttcctgggtttcca ggtgccaatggagagaaaggtgcccggggtgtagctggcaaaccaggccctcggggtcag cgtggtccaacgggtcctcgaggttcaagaggtgcgagaggtcccactgggaaacctggt ccaaagggcacttcaggcggtgatggtcctcctggccctcctggtgaaagaggtcctcaa ggacctcaaggtccagttgggttccctggaccaaaaggccctcctggaccacctggaaag gatggcctgccaggacaccctgggcaacgtggagagactgggtttcaaggcaagaccggc cctcctgggccagggggtgttgttggaccacagggaccaactggtgagactggtcccata ggtgaacgtggacatcctggtcctcctggccctcctggggagcaaggtcttcccggtgct gcaggaaaagaaggtgccaagggtgacccaggtcctcaaggtgtctcagggaaagacgga ccagcaggactacgtggtttcccaggtgaaagaggactttctggagctcagggtgcacct ggactgaaaggaggagaaggtccccagggcccaccaggtccagttggctcaccaggagaa cgtggctcagcaggaacagctggcccaattggtttgccagggcgaccaggaccgcagggt cctcctggtccagctggagagaaaggtgctcctggagaaaaaggtccccaaggccccgca ggcagagatggagtacaaggtcctgtgggtctcccagggcctgctgggcctgctggctcc cctggagaagatggagacaagggtgaaatcggtgaaccaggacaaaaaggcagcaagggt gacaaaggagaaaatggtcctcctggtcccccaggtcttcagggtccagttggtgcccct ggaatcgctggaggtgatggtgagccaggtcccagaggtcagcaggggatgtttggacaa aaaggtgatgaaggtgccagaggtttcccaggacctccgggtcccataggtcttcagggt ctgccaggcccacctggtgaaaaaggtgaaaatggggatgttggtcccatgggtccacct ggtcctccaggccccagaggtcctcaaggtcccaatggagctgatggaccacaaggaccc ccgggatccattggttccgttggtggtgttggagaaaagggtgagcctggagaagcaggg aacccagggcctcctggggaagcaggcacaggcggtcccaaaggagaaagaggagagaaa ggagaagctggtccaccgggtgctgctggacctcctggtgttaaaggaccatcaggtgac gatggccctaagggtaacccgggtcctgttggttttcctggagatcctggtccccctggg gaacctggccctgcaggtcaggatggtgttggtggtgacaagggtgaagatggagatcct ggacaaccgggtcctcctggcccatctggtgaggctggcccaccaggtcctcctggaaag agaggtcctcctggagctgcaggtgcagagggaagacaaggtgaaaaaggtgctaaggga gaagcaggagctgaaggtcctccaggaaaaactggcccagttggtcctcagggacctgcc ggaaagcctggtccagagggtcttcggggcatccctggccctgtgggagaacaaggtctc cctggagctgcaggccaagatgggccacctggtcctatgggacctcctggcttacctggt ctcaaaggtgaccctggctccaagggtgagaagggacatcctggtttaattggcctgatt ggtcctccaggagaacaaggtgaaaagggtgacagaggactccctggaactcaaggctct acaggagcaaaaggggatggaggtattccaggccctgctggtcccataggtccacctggt cctccaggcttaccaggtcctcaaggtccaaagggtaccaaaggctctactggacctgct ggccagaagggtgacagtggtcttccagggcctcctgggcctccgggtccaccgggtgaa gtcatacagcctttaccaatcttgtcacccaaaaaaacaagaaggcatacagaaagcatg caatcagatgcaggtgataatattctggattacactgatggaatggaggaaatatttggt tccctcaattccttgaaacaagacattgagcatatgaagtttccagtgggtacacagacc aacccagcccgaacttgcaaagatctgcaactcagccatcctgacttcccagatggtgaa tattggattgatcctaaccaaggttgctcaggagattccttcaaagtttactgtaatttc acgtctggtggtgagacttgcatttatccagacagaaagtcagagggcgtaagaatttca tcatggccaaaggagaaaccaagaagctggtttagtgaatttaagagaggaaaactgctt tcatatttagatgtggaaggcaattccattaatatggtgcaaatgacattcctgaaactg ctgactgcttctgctcggcaaaatttcacctacagctgtcatcagtcagcagcctggtac gatgtgtcatcaggaagctatgacaaagcacttcggttcctgggatcgaatgatgaggag atgtcctacgacaacaacccttacatcaaagccttatatgatggctgtgcgtccagaaaa ggctatgaaaagactgtgattgaaatcaatacaccgaaaattgaccaagtacctatcgtt gatgtaatgatcaatgactttggtgatcagaatcagaagtttggatttgaagttggtcct gtttgttttcttggctaa

DBGET integrated database retrieval system