KEGG   Balaenoptera musculus (blue whale): 118880654
Entry
118880654         CDS       T09887                                 
Symbol
POLR2J
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB11-a
  KO
K03008  DNA-directed RNA polymerase II subunit RPB11
Organism
bmus  Balaenoptera musculus (blue whale)
Pathway
bmus03020  RNA polymerase
bmus03420  Nucleotide excision repair
bmus05016  Huntington disease
Brite
KEGG Orthology (KO) [BR:bmus00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    118880654 (POLR2J)
  09124 Replication and repair
   03420 Nucleotide excision repair
    118880654 (POLR2J)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05016 Huntington disease
    118880654 (POLR2J)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:bmus03021]
    118880654 (POLR2J)
   03400 DNA repair and recombination proteins [BR:bmus03400]
    118880654 (POLR2J)
Transcription machinery [BR:bmus03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Core subunits
     118880654 (POLR2J)
DNA repair and recombination proteins [BR:bmus03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      118880654 (POLR2J)
SSDB
Motif
Pfam: RNA_pol_L_2 RNA_pol_L SHNi-TPR
Other DBs
NCBI-GeneID: 118880654
NCBI-ProteinID: XP_036680294
UniProt: A0A8C0D3D6
LinkDB
Position
15:79847767..79852175
AA seq 117 aa
MNAPPAFESFLLFEGEKKITINKDTKVPNACLFTINKEDHTLGNIIKSQLLKDPQVLFAG
YKVPHPLEHKIIIRVQTTPDYSPQEAFTNAITDLISELSLLEERFRVAIKDKQEGIE
NT seq 354 nt   +upstreamnt  +downstreamnt
atgaacgcgcctcccgccttcgagtcgttcttgctcttcgagggcgagaagaagatcacc
attaacaaggacaccaaggtacccaatgcctgtttgttcaccatcaacaaggaagaccat
acgctaggaaacatcattaaatcgcagctgctgaaggacccacaggtgctgtttgctggc
tacaaagtcccccaccccttggaacacaagatcatcatccgcgtgcagaccacaccggac
tacagcccccaggaggccttcaccaatgccatcacagacctcatcagcgagctctccctg
ctggaagagcgattccgggtggccatcaaagacaagcaagaaggaatcgagtag

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