Balaenoptera musculus (blue whale): 118880744
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Entry
118880744 CDS
T09887
Symbol
NDC1
Name
(RefSeq) LOW QUALITY PROTEIN: nucleoporin NDC1
KO
K14315
nucleoporin NDC1
Organism
bmus
Balaenoptera musculus (blue whale)
Pathway
bmus03013
Nucleocytoplasmic transport
bmus05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
bmus00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
118880744 (NDC1)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
118880744 (NDC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bmus03019
]
118880744 (NDC1)
Messenger RNA biogenesis [BR:
bmus03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
118880744 (NDC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ndc1_Nup
Motif
Other DBs
NCBI-GeneID:
118880744
NCBI-ProteinID:
XP_036680516
UniProt:
A0A8B8V6Q4
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All DBs
Position
1:complement(45128846..45176338)
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AA seq
777 aa
AA seq
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MQSRPQFLAPRRTLLRRDVLDSRGRALESQPPLEDVSAGRFWPVGPVQTEPRRDGLGPGP
GFAQAASETAPMGPSGGLPPFELRWRVGSLYPALFRVGAAITMVTAASRPCAGGPRDILW
RVLGWRIVTSIVWSVLLLPICTTVFVIFSSIDLFHPIQWLSDSFSDLYSSYIIFYLLLLS
VVIVXISIFNVEFYTVVPSIPCSRLALIGKIIHPQQLMHSFIHAAMGMMMAWCAAVITKG
QYSFLVVPCTATESLDGPAAQTCLNEYHLFFLLAGAFMGYSYSLLYFINNMNYLPFPIIQ
QYKFLRFRRSLLLLVKHSCVESLFLLRNFCIVYYFLGHIPKAWISTAMDLQLDEQFHRPL
DTVSGLLNLSLLYHVWLCGVFVLMTWYISWILFKIYATEAHLFPVQPPFSEESYECLPKV
LNSNPPLIIKYLALQDLMLLSQYSPSRRQEVFSLSQPGGHPHSWTAISRECLNLLNDMTQ
KLVLYQEAAATNGRVMSSSYPVEPKKLNSPEETTFHTPKSSQMPRPSMPSLIKTSLFSSK
LSAPDVASPLATPFGSSVVNRMAGIFDVNTCYGSPQSPQLTRRGPRLWTLASGQQMTEYS
NPSPSTSVSAEGKTVRQPNVIYSWIQNKREQIKNFLSKRVLIMYFFSKHPEASIQAVFSD
AQMHIWALEGLSHLVAASFTEDRFGVVQTTLPAILNTLLTLQEAVDKYFKLPHASSKPPR
ISGSLVDTSYKTLRFAFRASLKTAIYRITTTFGEHLNAVQASAEHQKRLQQFLEFKE
NT seq
2334 nt
NT seq
+upstream
nt +downstream
nt
atgcagagccgcccccagtttctggcgccccgccggaccctgcttcggagagacgttttg
gactccagagggcgggccctggagtcccagccccctttggaggacgtgtctgcggggcgg
ttctggcccgttgggcccgtccagacggaacctcgaagggatggtttggggcctgggccg
ggcttcgcccaggcagcgtctgagacagccccaatggggccctcggggggccttcctccc
tttgaactgcggtggcgggtgggctcactgtatcctgcacttttcagagtaggggccgcc
atcaccatggtcactgctgcgagtcggccgtgcgccggcgggccgcgggacatcctgtgg
cgcgttttgggctggaggatagttacaagtattgtctggtcagtgctgcttctgcccatc
tgtaccacagtatttgtcatcttcagcagcattgatttatttcatcctatacagtggctc
tcagattctttcagtgatctgtatagttcctatataatcttttaccttctgctgctgtca
gtggtaatagtanatataagtattttcaatgtggagttctatacagttgtgccttccatt
ccctgctcgagactggcactgatagggaagatcattcatcctcagcagctcatgcactcc
tttattcatgcagcaatgggaatgatgatggcttggtgtgctgcggtgataaccaagggt
caatacagttttcttgtggttccctgcactgctactgagagcttagatggccctgctgca
caaacctgcttaaatgagtatcaccttttttttctgctggctggagcatttatgggctat
agctatagcctcctgtattttattaacaacatgaactatcttccatttcccatcatacag
caatacaagttcttgcgcttcaggaggtctctgcttttgctagttaagcatagttgtgtg
gaatcgctgttcctgcttagaaatttctgcattgtgtattattttcttggccacattccc
aaagcttggattagcactgctatggaccttcagttagatgagcagtttcataggcctctt
gacactgtgagtggcctcttgaatctctcattactctaccatgtctggctctgtggtgtc
tttgtcctgatgacttggtacatctcgtggatactcttcaaaatctatgccacggaggct
catctgttccctgttcaaccaccattttcagaagagtcatatgaatgcctcccgaaagtt
ttaaacagcaatcctcccctcatcataaagtatttggccttgcaggacctgatgttgctt
tctcaatattctccttcacgaagacaagaagtttttagccttagccagccaggtggacat
ccccacagttggacagccatttcaagagagtgtttgaatcttttaaatgatatgactcag
aaacttgtactctatcaagaagctgctgctacaaatgggagagtgatgtcttcatcctac
ccagtggaacctaagaaattgaattctccagaagaaactacttttcacaccccaaaatct
agccagatgcctcggccttcaatgccatcattaattaagacgtcgctgttctcctcaaaa
ttgtctgcacctgatgttgcaagtcccctggcaaccccatttggctctagtgtagtgaat
cggatggctgggatttttgatgtaaacacgtgctatgggtcacctcagagtcctcagctt
acaagaagagggccaagattatggactttggcttctggtcagcaaatgactgaatattct
aatccttctccatctacctctgttagtgctgagggtaagacagtgagacagcccaatgtg
atttattcatggattcagaataaacgtgaacagattaagaatttcttatcaaaacgggtg
ctgataatgtattttttcagtaagcacccagaggcctccattcaggctgttttttcagat
gcccaaatgcatatttgggcattagaaggtctgtctcacttagtagcagcatcatttaca
gaagatagatttggagttgtccagactacactaccagctattcttaatactttgttgacg
ctacaagaggcagttgacaagtacttcaagcttcctcatgcttccagtaaaccacctcgg
atttcaggaagcctagtggacacttcttataaaacattaagatttgcctttagagcatca
ctaaaaactgccatctatagaataactactacatttggtgaacatctgaatgctgtgcaa
gcatctgcagaacatcagaaaagacttcaacagttcttggagttcaaagaatag
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