KEGG   Balaenoptera musculus (blue whale): 118881195
Entry
118881195         CDS       T09887                                 
Symbol
RAE1
Name
(RefSeq) mRNA export factor isoform X1
  KO
K14298  mRNA export factor
Organism
bmus  Balaenoptera musculus (blue whale)
Pathway
bmus03013  Nucleocytoplasmic transport
bmus05014  Amyotrophic lateral sclerosis
bmus05164  Influenza A
Brite
KEGG Orthology (KO) [BR:bmus00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    118881195 (RAE1)
 09160 Human Diseases
  09172 Infectious disease: viral
   05164 Influenza A
    118881195 (RAE1)
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    118881195 (RAE1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bmus03019]
    118881195 (RAE1)
   03036 Chromosome and associated proteins [BR:bmus03036]
    118881195 (RAE1)
Messenger RNA biogenesis [BR:bmus03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     118881195 (RAE1)
Chromosome and associated proteins [BR:bmus03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    118881195 (RAE1)
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_IFT122_1st Beta-prop_WDR5 Beta-prop_EML_2 WDR55 Beta-prop_WDR3_1st WD40_CDC20-Fz WD40 WD40_Prp19 WD40_WDHD1_1st Beta-prop_WDR36-Utp21_2nd Beta-prop_CAF1B_HIR1 EIF3I Beta-prop_WDR3_2nd WD40_Gbeta Beta-prop_TEP1_2nd Beta-prop_EML Beta-prop_Aladin Beta-prop_TEP1_C Beta-prop_NOL10_N Beta-prop_WDR36-Utp21_1st Beta-prop_RIG_2nd PAC11 WD40_RFWD3 Beta-prop_WDR90_POC16_2nd ANAPC4_WD40 Beta-prop_IFT140_1st Beta-prop_ACSF4 NBCH_WD40 ASA1 Beta-prop_Nup120_160 WDR90_beta-prop_4th Beta-prop_WDR41 Beta-prop_SPT8
Other DBs
NCBI-GeneID: 118881195
NCBI-ProteinID: XP_036681711
UniProt: A0A8B8VA39
LinkDB
Position
15:complement(5511165..5531064)
AA seq 431 aa
MRSVSAVIRAVSSTGVRRTSGSRDSCSSHLATASSAPERGRRLPSSSRSPSPASLRGATL
RAQMSLFGAASGFGTGGASMFGSAAADNHNPMKDIEVTSSPDDSIGCLSFSPPTLPGNFL
IAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLNS
NQAIQIAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPERCYCAD
MIYPMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIE
GRVAIHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRF
SFWDKDARTKLKTSEQLDQPISACCFNHNGNIFAYASSYDWSKGHEFYNPQKKNYIFLRN
AAEELKPRNKK
NT seq 1296 nt   +upstreamnt  +downstreamnt
atgcgcagtgtctccgcggtaattagggccgtttcctcgaccggcgtgagaagaacctca
ggctcacgggattcctgttccagccacctcgctaccgcctcctccgcgcccgagcggggt
cgcaggctcccgagctcctcccgctccccgtcgccggcttccctccgcggcgcgactctc
agggcccagatgagcttgtttggagcagcctccgggttcggcacggggggagccagcatg
ttcggcagcgccgccgcagataatcacaaccctatgaaggatattgaagtcacatcctct
cctgatgatagcattggttgtctatcttttagcccaccaaccttgccggggaactttctt
attgcaggatcgtgggctaacgatgttcgatgctgggaagttcaagacagtggacagact
attccaaaagcccagcagatgcacactggacctgtgctagatgtctgctggagtgatgat
gggagcaaagtatttacggcatcatgtgataaaactgccaaaatgtgggacctcaacagt
aaccaggcgatacagatagcacagcacgatgctcctgttaaaaccatacattggatcaaa
gcaccaaactacagctgtgtgatgaccgggagctgggataagactttgaagttttgggat
acacgatcatcaaatcctatgatggttttacaactccctgaaaggtgttactgtgctgac
atgatataccctatggctgtggtggcgactgcagagcggggactgatcgtctatcagtta
gagaatcaaccttctgaattcaggaggatagaatctccgctgaaacatcagcatcgatgt
gtggctatttttaaagacaaacagaacaagccgacaggttttgccctgggaagcattgag
ggaagagttgccattcactacatcaaccccccaaatcctgccaaagataacttcaccttt
aaatgtcatcgatctaacggaaccaacacttcagctcctcaggacatttacgcggtaaat
ggaattgcgttccatcctgttcatggcacccttgcaactgtgggatctgatggtagattc
agcttttgggacaaagatgccagaacaaaactaaaaacttcggaacagttagatcaaccg
atatcggcttgctgcttcaatcacaatggaaacatatttgcatatgcttccagctacgac
tggtcaaagggacatgaattttataacccccaaaagaaaaattacattttcctacgtaac
gcagccgaagagctaaagcccaggaataagaagtag

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