Balaenoptera musculus (blue whale): 118881216
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Entry
118881216 CDS
T09887
Symbol
TNRC6A
Name
(RefSeq) trinucleotide repeat-containing gene 6A protein isoform X1
KO
K18412
trinucleotide repeat-containing gene 6 protein
Organism
bmus
Balaenoptera musculus (blue whale)
Brite
KEGG Orthology (KO) [BR:
bmus00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bmus03019
]
118881216 (TNRC6A)
03036 Chromosome and associated proteins [BR:
bmus03036
]
118881216 (TNRC6A)
Messenger RNA biogenesis [BR:
bmus03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
118881216 (TNRC6A)
Chromosome and associated proteins [BR:
bmus03036
]
Eukaryotic type
Gene silencing
piRNA pathway
118881216 (TNRC6A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNRC6-PABC_bdg
Ago_hook
RRM_1
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
118881216
NCBI-ProteinID:
XP_036681766
UniProt:
A0A8B8VA92
LinkDB
All DBs
Position
15:68455432..68552682
Genome browser
AA seq
1964 aa
AA seq
DB search
MRELEAKATKDVERNLSREQTRRRGRREYWMEGLRGDADLVQEEEQLMEEKKKKKDDKKK
KEAAQKKATEQKIKVPEQIKPSVSQPQPANSNNGTSTATSTNNNAKRATANNQQPPPQPP
PQPQQPPQPQPPQALPRYPREVPPRFRHQEHKQLLKRGQHFPVIAANLGSAVKVLSSQSE
SSALTNQQPQNNGEVQISKNQSDINHNTSGSHYENSQRGPVSSTGDSSTNCKNAVVNDSP
EKEAWPSVPGSDPELASECVDADSASSSESERNVTIMASGSTGGENDGLRNSTGLGSQNK
FVVGSSSNNVGHGSSTGPWGFSHGAIISTCQVSVDAPESKSESSNNRMNAWGTVSSSSNG
GLNPSTLNSASNHGAWPVLENNGLALKGPVGSGSSGISIQCSTLGQMPNNQSINSKVGGS
STHGTWGSLQETCESEVSGTQKVSFSGQPQNITTEMTGPNNTTNFVTSSLPNSGSVQNNE
LPSNTGAWRVSTMNHPQIQAPSVVNGTSLSHLSNGESKSGGSYGTTWGAYGSNYSGDKCS
SPNGQANGDTVNATLMQPGINGPMGTNFQVNTNKGGGVWESGAVNSQSASWGNGANSGGS
RRGWGTPAQNTGTNIPSVEWSKLPSNQHSSDSANGNGKKFTNGWKSTEEEDQGSATSQTN
EQNSVWAKTGGTVESEGSTESTGRLEEKVTGENQSRERRKIDQHTLLQSIVNRTDLDPRV
LSNSGWGQTPIKQNTAWDTETSPRGERKTDNGTEAWGSSATQTFNSGACTDKTSPSSNDT
SSVSGWGDPKPTLRWGDSKGSNCQGGWEDDSAATGMAKSNQWGNCKEEKSAWNDSQKNKQ
GWGDGQKSNQGWSVSASDNWGETSRSNHWGEANKKSSSGGSDSDRSVSGWNELGKTSSFT
WGNNINPNNSSGWDESSKPNPSQGWGDPPKSNQSLGWGDSSKPVSSPDWNKQQDVGSWGI
PSATGKPPGTGWLGGPIPAPTKEEEPTGWEEPSPESIRRKMEIDDGTSAWGDPSKYNYKN
VNMWNKNVPNGSSRSDQQAQVHQLLPSASAISNKEASSGSGWGEPWGETSTPATTVDNGT
SAWGKPVDSGPSWGEPIAAASSTSTWGSSSVGPQALSKSGPKSMQDGWCGDDMPLPGNRP
TGWEEEEDVEIGMWNSNSSQELNSSLNWPPYTKKMSSKGLSGKKRRRERGMMKGGNKQEE
AWINPFVKQFSNISFSRDSPEENVQSNKMDLSGGMLQDKRMEIDKHSLNIGDYNRTVGKG
PGSRPQISKESSMERSPYFDKDGIVADESQNMQFMSSQSMKLPPSNSALPNQALGSIAGL
GMQNLNSVRQNGNPSMFGVGNTAAQPRGMQQPPAQPLSSSQPHLRAQVPPPLLSPQVPVS
LLKYAPNNGGLNPLFGPQQVAMLNQLSQLNQLSQISQLQRLLAQQQRAQSQRSVPSGNRQ
QQDQQGRPLSVQQQMMQPSRQLDPNLLVKQQTPPSQQQSLHQPAMKSFLENVMPHTTPEL
QKGPSPINAFSNFPIGLNSNLNVNMDMNSIKEPQSRLRKWTTVDSISVNTSLDQNSSKHG
AISSGFRLEESPFVPYDFMNSSASPASPPGSVGDGWPRAKSPSGSSSVNWPPEFRPGEPW
KGYPNIDPETDPYVTPGSVINNLSINTVREVDHLRDRNSGSSSSLNTTLPSTSAWSSIRA
SNYNVPLSSTAQSTSARNSDSKLTWSPGSVTNTSLAHELWKVPLPPKNITAPSRPPPGLT
GQKPPLSTWDNSPLRVGGGWGNSDARYTPGSSWGESSSGRITNWLVLKNLTPQIDGSTLR
TLCMQHGPLITFHLNLPHGNALVRYSSKEEVVKAQKSLHMCVLGNTTILAEFASEEEISR
FFAQSQSLTPSPSWQSLGSSQSRLGSLDCSHSFSSRTDLNHWNGAGLSGTNCGDLHGTSL
WGTPHYSTSLWGPPSSSDPRGISSPSPINAFLSVDHLGGGGESM
NT seq
5895 nt
NT seq
+upstream
nt +downstream
nt
atgagagaattggaagctaaagctaccaaagacgtagaaagaaatcttagcagggagcag
acacggagaagaggccggagggaatactggatggagggattgcggggagatgcggattta
gtgcaagaagaagaacagttgatggaagaaaagaaaaagaaaaaagacgacaagaaaaag
aaggaagctgctcaaaagaaggccactgaacaaaaaatcaaagtgccagaacagataaag
cccagtgtaagccagcctcagcctgccaactctaataacggcacttccacagcaaccagc
actaataataatgccaagcgagccacagccaacaatcagcagccgccgccgcagccgccg
ccgcagccacagcagccgccgcagccgcagccaccacaggccttgcctcggtatccgcgc
gaagttccacctcgatttcgccaccaggaacataagcagcttctaaagaggggtcagcat
tttcctgtcatagcagcaaacctgggatctgctgttaaagtgttaagcagccagtcagag
agcagtgctttaacaaatcaacagccacaaaataacggagaggtgcagatcagcaaaaac
cagtcagatataaaccacaatacttcaggatcccattatgaaaattcgcagcggggacct
gtgtcttctacaggtgactctagcacaaactgtaagaatgctgttgtaaacgactcgcct
gaaaaagaagcatggccctcagtccctggcagtgatccagagttggcctcagaatgtgtg
gacgctgattctgcctccagttctgaatcagagagaaacgtcactatcatggcttcaggg
agcacaggtggtgaaaatgatggccttcggaatagcactggacttggatcccaaaacaag
tttgtggttggtagcagcagcaataatgtgggccatggaagtagtactgggccatggggt
ttttcccatggagccataataagcacatgtcaggtctctgtggatgctcctgaaagcaaa
tcagaaagtagcaacaatagaatgaatgcttggggcactgtaagttcttcatcaaatgga
gggttaaatccaagcactttgaattcagctagcaaccatggtgcctggccagtgttagag
aacaacggacttgccctaaaagggcctgtagggagtggtagttctggcatcagtattcag
tgcagtaccttaggccagatgcctaacaatcagagtattaactctaaagtgggtggttct
tctacccatggtacctggggaagccttcaggaaacttgtgaatctgaagtaagtggtaca
cagaaggtttcattcagtggtcaacctcaaaatattaccactgaaatgactggaccaaat
aacactactaactttgtgacctctagtttaccaaactccggttcagtacagaataacgaa
ctgcctagtaatacaggggcctggcgtgtgagcacaatgaatcatcctcagatacaggct
ccgtcggttgtaaatggcacttccctttctcaccttagcaatggagagtcaaaaagtgga
ggctcttacggtactacatggggtgcctatggttctaattactctggagacaaatgttca
agccctaatggccaagctaatggtgacactgtgaatgcaactctaatgcagcctggcata
aacgggcctatgggcactaactttcaagttaacacaaataaaggaggaggtgtgtgggag
tctggggcagtgaattcccagagtgcatcatggggaaatggtgcaaattctggaggaagt
cgaagaggatggggaactcctgcacaaaacactggcactaatatacccagcgtggaatgg
agcaaactgcctagcaatcagcattccagtgacagtgcaaatggcaatggtaagaagttt
acaaacggatggaaatctactgaggaagaggatcagggttctgccacatctcagacaaat
gagcaaaacagtgtgtgggccaaaacgggaggtacagtggagagtgaaggtagtacagaa
agcactggacgcctcgaggaaaaagtaactggggaaaatcagagtagagagagacgaaaa
attgatcagcacacattactccaaagcattgtaaacagaactgacttagatccacgtgtc
ctatccaactctggttggggacagactcctattaagcagaatactgcctgggataccgaa
acatcacctagaggggaaagaaagactgacaatgggacagaggcctggggaagctctgca
acacagacttttaactcaggggcatgtacagataagactagccctagtagtaatgatacc
tcatctgtatcggggtggggagatcccaaacctactctgaggtggggagattccaaaggc
tcaaactgccaggggggatgggaagatgattctgctgctacaggaatggccaagagcaat
cagtgggggaattgcaaagaagagaagtctgcatggaatgattcgcaaaagaacaaacag
ggatggggtgatggacaaaaatcaaaccaaggttggtccgtttctgccagtgataactgg
ggagaaacttcaaggagtaaccattggggtgaggctaataagaaatctagctcaggaggt
agtgacagtgataggtccgtttctggttggaacgaacttggtaaaactagttcttttact
tggggaaataacataaatccaaataattcatcaggatgggatgaatcttctaaaccgaat
ccttcccagggatggggagatcctccaaagtctaatcagtctctaggttggggagattcg
tcaaagccagtcagttctccagactggaacaagcaacaagatgtcggatcttggggaatc
ccatcagctacaggcaaacctcctggtacaggctggctgggaggacctataccagcccca
acaaaagaagaagagcccacaggctgggaggaaccatccccagaatccatacgtcgcaaa
atggagatcgatgatggaacttcagcttggggagatccaagcaaatacaactacaaaaat
gtgaacatgtggaacaaaaacgtcccaaatggcagcagccgttcagaccagcaagcacag
gtacatcagttgctaccatctgcaagtgccatctcaaacaaagaggcaagcagtggctct
ggctggggtgagccctggggtgagacttctactccagccacaactgtggataatggtact
tcggcatggggtaaacccgtagacagtggtcccagctggggcgaacccattgctgcggca
tccagcacgtccacgtggggctccagctctgttggtccacaagcattaagcaaatctggg
ccaaaatctatgcaagatggctggtgtggtgatgatatgccattacctggaaatcgcccc
actggctgggaagaggaagaggatgtagagattggaatgtggaatagtaattcatctcaa
gagcttaattcatctttaaattggccaccatatacaaagaaaatgtcgtcgaagggtctg
agtggcaaaaaaaggagaagggaaaggggaatgatgaaaggtggaaacaaacaagaagaa
gcatggataaatccatttgttaaacagttttcaaatatcagtttttcgagagactcacca
gaagaaaatgtacagagcaataagatggacctttctggaggaatgttacaagacaaacga
atggagatagataaacatagcctaaatattggtgattacaatcgaacggtcgggaaaggc
cctggttctcggcctcagatttccaaagagtcttccatggagcgcagtccttattttgat
aaggatggcattgtagcagatgaatcccaaaacatgcagtttatgtccagtcaaagcatg
aagcttcccccttcaaatagtgcactacctaaccaggcccttggctccatagcagggctg
ggtatgcaaaacttgaattctgttagacagaatggcaatcccagtatgtttggtgttgga
aacacagcagcacaaccccggggcatgcagcagccgccagcacagcctctcagttcatct
cagcctcatctccgtgctcaagtgcctcctccgttactctcccctcaggttccagtttca
ttgctgaagtatgcaccaaacaacggtggcctgaatccgctctttggccctcagcaggta
gccatgctgaaccagctatcccaactaaaccagctttctcagatctcccagttacagcga
ttgttagcgcagcagcaaagggcgcagagtcagagaagcgtgccttctgggaaccggcag
cagcaagaccagcagggtcgacctcttagtgtgcagcagcagatgatgcaaccatctcgt
caacttgatccaaacctgttggtgaagcaacagactccgccgtctcagcagcagtcactc
catcagccagccatgaaatctttccttgaaaatgtcatgccccacactacacctgagctg
caaaaagggccatcaccaataaatgctttcagcaacttccccataggcttgaactcaaac
ttgaatgtaaatatggatatgaacagtattaaagagccacagtcaagactaaggaagtgg
actacagtggacagcatttctgtgaacacatctttggatcaaaactccagcaaacatggt
gctatttcaagtggtttcaggctggaagagtctccgtttgttccctatgactttatgaac
agcagtgcttcaccagccagccctccgggttccgtaggggacggctggccacgtgccaaa
tcgcccagcggctctagcagtgttaattggccaccagaatttcgccctggtgaaccatgg
aaaggctatccaaacattgaccctgaaactgacccttatgtcactcctggcagtgtcata
aacaatctttcaattaatactgtgcgggaagtcgaccacctcagggacaggaatagtggg
tcatcctcatccttgaacaccacgctgccttcaactagtgcctggtcatccattcgtgcc
tccaactacaacgttcccctcagcagtacagcacaaagcacttcagccagaaatagtgat
tccaaattgacatggtctcctggttcagttacaaacacgtctctggctcatgagctgtgg
aaggtccctttgccacctaaaaacatcactgctccgtcccgcccacctccgggactgact
ggtcagaagccacccttgtctacgtgggataattctccccttcgtgtaggtggaggatgg
ggaaattctgacgccaggtacaccccaggttccagctggggtgagagcagctcagggaga
ataacaaattggcttgttctgaaaaaccttacacctcagatcgatggctcgactctgcgc
actctgtgcatgcagcatggcccactgataacattccacctgaacctcccacatggaaat
gctttggtccgttacagttcaaaagaagaggtagtgaaggcacaaaagtctctgcacatg
tgtgtactggggaacactactattcttgctgagtttgccagtgaagaggagatcagtcgt
ttctttgcacaaagtcagtctctgaccccttctcccagctggcagtctctcgggtccagc
cagagccggctgggctccctcgactgttcccactcattctccagccggaccgatctcaat
cactggaatggtgctgggctgtcgggaactaactgtggagaccttcatggcacttccctc
tgggggaccccacattattccacaagcttgtggggtcctccaagcagcagcgacccccgg
ggaattagcagcccatcccccattaacgcttttctttctgttgaccacctgggtgggggt
ggagagtccatgtaa
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