Balaenoptera musculus (blue whale): 118882374
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Entry
118882374 CDS
T09887
Symbol
VTI1A
Name
(RefSeq) vesicle transport through interaction with t-SNAREs homolog 1A isoform X1
KO
K08493
vesicle transport through interaction with t-SNAREs 1
Organism
bmus
Balaenoptera musculus (blue whale)
Pathway
bmus04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
bmus00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
118882374 (VTI1A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bmus04131
]
118882374 (VTI1A)
Membrane trafficking [BR:
bmus04131
]
SNARE
SNAP-25[N] (Qb)
Vti1
118882374 (VTI1A)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
V-SNARE
V-SNARE_C
LMBR1
Laminin_II
Sec20
DUF6987
FliG_N
Fusion_gly
DUF1664
DUF5339
Sec8_N
DUF5344
FapA
HAAS
Motif
Other DBs
NCBI-GeneID:
118882374
NCBI-ProteinID:
XP_036683899
UniProt:
A0A8B8VGA0
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All DBs
Position
16:complement(17485837..17883367)
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AA seq
224 aa
AA seq
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MSSDFEGYEQDFAVLTAEITNKIARVPRLPPDEKKQVVANVEKQLEEAKELLEQMDLEVR
EIPPQSRGMYSNRMRSYKQEMGKLETDFKRSRIAYSDEVRNELLGDDGNSSENQLIKLRE
ERAHLLDNTERLERSSRRLEAGYQIAVETEQIGQEMLENLSHDREKIQRARERLRETDAN
LGKSSRVLTGMLRRIIQNRILIVLLAVVLVITILTAITFSVRRH
NT seq
675 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtccgacttcgaaggctacgagcaggacttcgcggtgctcactgcagagatcacc
aataagattgcgagggtcccccgactcccgcctgatgagaagaagcaggtggttgcaaat
gtggagaaacagctcgaagaagcaaaagaactgttggaacagatggatttggaagtccga
gagataccaccccaaagtcgaggaatgtacagcaacaggatgagaagctacaagcaagaa
atgggaaaacttgagacagattttaaaaggtcacggattgcctacagtgacgaagtacgg
aatgagctcctaggggatgatgggaattcctcagagaaccagttgataaaattacgtgaa
gagagggcacatctgctcgataacacagagaggctggaaaggtcatctcggagactagag
gctgggtaccaaatagcagtggaaaccgaacaaattggccaggagatgttggaaaacctc
agtcatgacagagaaaagatacagagagcacgtgaaagacttcgggaaacagatgctaac
ttggggaaaagctccagggttctgacagggatgttgagaagaatcatccagaaccgcatc
ctgatcgtccttctggccgtcgtcctggttatcaccatcctgacagccatcactttttct
gtcagaagacactga
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