Balaenoptera musculus (blue whale): 118882694
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Entry
118882694 CDS
T09887
Symbol
VCL
Name
(RefSeq) vinculin isoform X1
KO
K05700
vinculin
Organism
bmus
Balaenoptera musculus (blue whale)
Pathway
bmus04510
Focal adhesion
bmus04520
Adherens junction
bmus04670
Leukocyte transendothelial migration
bmus04810
Regulation of actin cytoskeleton
bmus04820
Cytoskeleton in muscle cells
bmus05100
Bacterial invasion of epithelial cells
bmus05146
Amoebiasis
Brite
KEGG Orthology (KO) [BR:
bmus00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
118882694 (VCL)
04520 Adherens junction
118882694 (VCL)
09142 Cell motility
04820 Cytoskeleton in muscle cells
118882694 (VCL)
04810 Regulation of actin cytoskeleton
118882694 (VCL)
09150 Organismal Systems
09151 Immune system
04670 Leukocyte transendothelial migration
118882694 (VCL)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
118882694 (VCL)
09174 Infectious disease: parasitic
05146 Amoebiasis
118882694 (VCL)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
bmus04812
]
118882694 (VCL)
04147 Exosome [BR:
bmus04147
]
118882694 (VCL)
Cytoskeleton proteins [BR:
bmus04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
118882694 (VCL)
Exosome [BR:
bmus04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
118882694 (VCL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vinculin
Talin_IBS2B
VMAP-M0
Motif
Other DBs
NCBI-GeneID:
118882694
NCBI-ProteinID:
XP_036684752
UniProt:
A0A8B8VJN4
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All DBs
Position
16:complement(60672638..60770043)
Genome browser
AA seq
1135 aa
AA seq
DB search
MPVFHTRTIESILEPVAQQISHLVIMHEEGEVDGKAIPDLTAPVAAVQAAVSNLVRVGKE
TVQTTEDQILKRDMPPAFIKVENACTKLVQAAQMLQSDPYSVPARDYLIDGSRGILSGTS
DLLLTFDEAEVRKIIRVCKGILEYLTVAEVVETMEDLVTYTKNLGPGMTKMAKMIDERQQ
ELTHQEHRVMLVNSMNTVKELLPVLISAMKIFVTTKNSKNQGIEEALKNRNFTVEKMSAE
INEIIRVLQLTSWDEDAWASKKDTEAMKRALASIDSKLNQAKGWLRDPSASPGDAGEQAI
RQILDEAGKVGELCAGKERREILGTCKMLGQMTDQVADLRARGQGASPVAMQKAQQVSQG
LDVLTAKVENAARKLEAMTNSKQSIAKKIDAAQNWLADPNGGPEGEEQIRGALAEARKIA
ELCDDPKERDDILRSLGEISALTSKLADLRRQGKGDSPEARALAKQVATALQNLQTKTNK
AVANSRPAKAAVHLEGKIEQAQRWIDNPTVDDRGVGQAAIRGLVAEGHRLANVMMGPYRQ
DLLAKCDRVDQLTAQLADLAARGEGESPQARALASQLQDSLKDLKARMQEAMTQEVSDVF
SDTTTPIKLLAVAATAPPDAPNREEVFDERAANFENHSGRLGATAEKAAAVGTANKSTVE
GIQASVKTARELTPQVISAARILLRNPGNQAAYEHFETMKNQWIDNVEKMTGLVDEAIDT
KSLLDASEEAIKKDLDKCKVAMANIQPQMLVAGATSIARRANRILLVAKREVENSEDPKF
REAVKAASDELSKTISPMVVDAKAVAGNISDPGLQKSFLDSGYRILGAVAKVREAFQPQE
PDFPPPPPDLEQLRLTDELAPPKPPLPEGEVPPPRPPPPEEKDEEFPEQKAGEVINQPMM
MAARQLHDEARKWSSKPGNPAAEVGVSAVAEADAAAAVGSPVPPDMEDDYEPELLLVPSS
QPVNQPILAAAQSLHREATKWSSKGNDIIAAAKRMALLMAEMSRLVRGGSGTKRALIQCA
KDIAKASDEVTRLAKEVAKQCTDKRIRTNLLQVCERIPTISTQLKILSTVKATMLGRTNI
SDEESEQATEMLVHNAQNLMQSVKETVREAEAASIKIRTDAGFTLRWVRKTPWYQ
NT seq
3408 nt
NT seq
+upstream
nt +downstream
nt
atgccggtgtttcatacgcgcacgattgagagcattctggagccggtggcgcagcagatc
tcgcacctggtgatcatgcacgaggaaggcgaggtggacggcaaagccatccctgacctc
actgcgcctgtggccgccgtgcaggcggccgtcagtaacctcgttcgggttggaaaagag
accgttcagaccactgaggatcagattttgaagagagatatgccaccagcatttattaag
gtggagaatgcttgcaccaagcttgtccaggcagcccagatgcttcagtcagacccttac
tcagtgcctgctcgagattatctaattgatggatcaaggggcatcctctccggcacatca
gacctgctcctcaccttcgacgaggctgaggttcgtaaaattattagagtttgcaaagga
attttggaatatcttacagtggcagaggtggtggaaactatggaagatttggtcacttac
acaaagaatcttggaccaggaatgactaagatggccaagatgattgatgagaggcagcag
gaactgactcatcaggagcaccgagtgatgttggtgaactcaatgaacaccgtgaaggag
ttgctgccagttctcatttcagctatgaagatttttgtaacaactaaaaactcaaaaaac
caaggaattgaagaagctttgaaaaatcgtaattttactgtagaaaagatgagcgctgaa
attaatgagatcattcgtgtattacaactcacttcttgggacgaagatgcctgggccagc
aagaaggacactgaagccatgaagagagcgttggcctccatagactccaaactgaaccag
gctaaaggttggctccgtgaccccagtgcctccccaggtgatgctggtgaacaggccatc
aggcagatcttagatgaagctggaaaagttggtgaactctgtgcaggcaaagaacgcagg
gagatcctgggaacctgcaaaatgctagggcagatgactgatcaagtggctgacctccga
gccagaggacaaggagcctcaccggtggccatgcagaaagcccagcaggtgtctcagggt
ctggatgtgctcacagcaaaagtggaaaatgcagcccgcaagctggaagccatgaccaac
tcaaagcagagcattgcgaagaagatcgatgctgctcagaattggcttgcagatccaaat
ggtggaccagaaggagaagaacagattcgaggggctttggctgaagctcggaaaatagca
gaattatgtgatgatcctaaagagagagatgacattctacgttctcttggagaaatatct
gctctgacttctaaattagcagatctacgaagacagggaaaaggagattccccagaggct
cgagcattggccaaacaggtggccacggccctacagaacttgcagaccaaaaccaacaag
gctgtggccaacagcagacctgccaaagcagctgtccaccttgagggcaagattgagcag
gcacagcggtggattgataatcccacagtggatgaccggggagttggtcaggctgccatc
cgagggcttgtggccgaaggtcatcgtctggcaaatgtcatgatggggccttatcgccaa
gatcttcttgcaaagtgtgaccgagtggaccagctgacggcccagctggctgacctggct
gccagaggggaaggggagagtcctcaggcgagagcccttgcatctcagctccaagactct
ttaaaggatctgaaagcccggatgcaggaggccatgactcaggaggtgtcagatgttttc
agtgatactacaactcccatcaagctgttggcagtggcagccactgcccctcctgatgca
cccaatagggaagaggtatttgatgagagggcagctaactttgaaaaccactcaggaagg
cttggggccacggcagagaaggcggctgctgttggaactgctaataaatcaacggtggaa
ggcattcaggcctcagtgaagacagcccgagaactcacaccccaggtcatctcagcggct
cgcatcttactaaggaatcccggaaatcaagctgcttatgaacattttgagaccatgaag
aaccagtggatcgataatgttgaaaaaatgacagggctggtggacgaagccattgacacc
aaatctctgttggatgcttccgaagaagcaattaaaaaagacctggacaagtgtaaagtc
gccatggccaatattcagcctcagatgctggtcgctggggcaaccagcattgctcgtcgg
gccaaccggatcctgctggttgctaagagggaggtggagaactctgaggatcccaagttc
cgagaggccgtgaaagccgcctctgacgaattgagcaaaaccatctccccgatggtggtg
gatgcaaaggctgtggcaggaaacatttctgaccctggcctgcaaaagagcttcctggac
tcaggataccggatcctgggagcagtggccaaggtcagagaagccttccaacctcaggag
cctgacttcccgcctcctccgccagaccttgaacagctccgactgacagatgagctcgct
cctcccaaaccacctctgcctgagggtgaggtccctcctcccaggcccccaccaccagag
gagaaggatgaagagttccctgagcagaaagctggggaggtgattaaccagccaatgatg
atggctgccaggcagctccatgatgaagctcgcaaatggtccagcaagccgggtaaccca
gccgctgaggtgggtgtaagtgctgtagctgaggcagatgcggctgctgctgttgggtcc
cctgtcccccctgacatggaagacgattacgaacctgagctgctgctagtgccatccagt
cagccggtcaaccagcccattctggcagcggctcagtcattgcatcgggaagctaccaag
tggtctagtaagggcaatgacatcattgcagcagccaagcgcatggctctgctgatggct
gagatgtctcggctggtcagagggggcagcggtaccaagcgggcactgattcagtgtgcc
aaggacatagccaaggcctcagatgaggtgactcggttggccaaggaggttgccaagcag
tgcacagataagcggattagaaccaacctcttacaggtatgcgagcgaatcccaaccata
agcacccagctcaaaatcctgtccacggtgaaggccaccatgctgggccggaccaacata
agtgacgaggagtctgagcaggccacagagatgctggttcacaacgcccagaacctcatg
cagtctgtgaaggagactgttcgagaagcagaagcagcttcaatcaaaattcgaacagat
gctggatttacactgcgctgggttagaaagactccctggtaccagtag
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integrated database retrieval system
