Balaenoptera musculus (blue whale): 118883225
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Entry
118883225 CDS
T09887
Symbol
SOX17
Name
(RefSeq) transcription factor SOX-17
KO
K04495
transcription factor SOX17 (SOX group F)
Organism
bmus
Balaenoptera musculus (blue whale)
Pathway
bmus04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
bmus00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
118883225 (SOX17)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bmus03000
]
118883225 (SOX17)
Transcription factors [BR:
bmus03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
118883225 (SOX17)
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Gene cluster
GFIT
Motif
Pfam:
HMG_box
Sox17_18_mid
HMG_box_2
HMG_WDHD1
HTH_24
Motif
Other DBs
NCBI-GeneID:
118883225
NCBI-ProteinID:
XP_036685683
UniProt:
A0A8B8VLD6
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Position
17:complement(77426565..77429035)
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AA seq
412 aa
AA seq
DB search
MSSPDAGYASDEQSQPRSALPAVMAGLGPCPWAESLSPLGDMKMKGEAAASSGAPAGTAG
RAKGESRIRRPMNAFMVWAKDERKRLAQQNPDLHNAELSKMLGKSWKALTLAEKRPFVEE
AERLRVQHMQDHPNYKYRPRRRKQVKRLKRVEGGFLHGLAEPPAAALGPEGGRVAMDGLG
LPFPEQGFPAGPPLLPPHMGGHYRDCQALGAPPLDGYPLPTPDTSPLDGVEPDPAFFAAP
LPGDCPAAGPYSYAQAADYAGPPEPPAAGPLHARLGPEPAGPAMPGLLAPPSALHMYYGA
MGSPAAAAAAAGGGRGFQMPPQPPPPGPGQPSPPPEALPCRDGADPGQPAELLGEVDRTE
FEQYLHFVCKPEMGLPYQGHDSGVNLADSHGAISSVVSDASSAVYYCNYPDV
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcccggatgcggggtacgccagtgacgagcagagccagccccggagcgcgctg
cccgccgtgatggccggcctgggcccctgcccctgggccgagtcgctgagtcccctcggg
gacatgaagatgaagggcgaggcggcggcgagcagcggggcgccggccgggacggcgggc
cgagccaagggcgagtctcgcatccggcggccgatgaacgccttcatggtgtgggcgaag
gacgaacgcaagcgcctggcgcagcagaacccggacctgcacaacgccgagctgagcaag
atgctgggcaagtcgtggaaggcgctgacgctggcggagaagcggcccttcgtggaggag
gccgagcggctgcgcgtgcagcacatgcaggaccacccgaactacaagtaccggccgcgg
cggcgcaagcaggtgaagcggctgaagcgggtggagggcggcttcctgcacggcctcgcc
gagccgccggcggccgcgctgggccccgagggcggccgcgtggccatggacggcctgggc
ctgcccttccccgagcagggcttccccgcgggcccgccgctgctgcccccgcacatgggc
ggccactaccgcgactgccaggctctgggcgcgcccccgctcgacggctacccgctgccc
acgcccgacacgtccccgctggacggcgtggagcccgaccccgccttcttcgccgcgccg
ctgcccggggactgtccggccgccgggccctacagctacgcgcaggccgcggactatgcg
gggcccccggagccgcccgccgccgggcccctgcacgcccggctcggcccggagcccgcg
ggccccgcgatgccgggcctcctggcgccccccagcgccctgcacatgtactacggcgcg
atgggctcgccggcggcggcggcggcggcggcgggcggcgggcgcggcttccagatgccg
ccgcagccgcccccgccgggcccggggcagccgtcgccgccgcccgaggcgctgccctgc
cgggacggcgcggaccccggccagccggccgagctcctcggggaggtggaccgcacggaa
ttcgaacagtacctgcactttgtgtgcaagcccgagatggggctcccctaccagggacac
gactccggcgtgaatctggcggacagccacggggccatctcctcggtggtgtccgacgcc
agctccgcggtgtattactgcaactaccccgacgtctga
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