Balaenoptera musculus (blue whale): 118883959
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Entry
118883959 CDS
T09887
Symbol
SOX1
Name
(RefSeq) transcription factor SOX-1
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
bmus
Balaenoptera musculus (blue whale)
Brite
KEGG Orthology (KO) [BR:
bmus00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bmus03000
]
118883959 (SOX1)
Transcription factors [BR:
bmus03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
118883959 (SOX1)
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GFIT
Motif
Pfam:
SOXp
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
118883959
NCBI-ProteinID:
XP_036687021
UniProt:
A0A8B8VQ49
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All DBs
Position
18:78327952..78331720
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AA seq
387 aa
AA seq
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MYSMMMETDLHSPGGAQAPTNLSGPAGAGGGGGGGGGAGAKANQDRVKRPMNAFMVWSRG
QRRKMAQENPKMHNSEISKRLGAEWKVMSEAEKRPFIDEAKRLRALHMKEHPDYKYRPRR
KTKTLLKKDKYSLAGGLLAAGAGGGGAAVAMGVGVGVGAAAVGQRLESPGGAAAGGYAHV
NGWANGAYPGSVAAAAAAAAMMQEAQLAYGQHPGAGGAHPHAHPAHPHPHHPHAHPHNPQ
PMHRYDMGALQYSPISNSQGYMSASPSGYGGLPYGAAAAAAAAAGGAHQNSAVAAAAAAA
AASSGALGALGSLVKSEPSGSPPAPAHSRAPCPGDLREMISMYLPAGEGGDPAAAAAAAA
QSRLHSLPQHYQGAGAGVNGTVPLTHI
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atgtacagcatgatgatggagaccgacctgcactcgcccggcggcgcccaggcccccacg
aacctgtcgggcccggccggggcgggcgggggcggcggcggcggcggcggcgcgggagcc
aaggccaaccaggaccgggtgaagcggcccatgaacgccttcatggtgtggtcccgcgga
cagcggcgcaagatggcccaggagaaccccaagatgcacaactcggagatcagcaagcgc
ctgggcgccgagtggaaggtcatgtccgaagccgagaagcggcctttcatcgacgaggcc
aagcggctgcgcgcgctgcacatgaaggagcacccggactacaagtaccggccgcgtcgc
aagaccaagacgctgctcaagaaggacaagtactcgctggccggcgggctgctggcggca
ggcgcgggcggcggcggcgcggccgtggccatgggcgtgggcgtgggtgtgggcgcggcg
gccgtgggccagcgcctcgagagcccgggcggcgcggcggccggcggctacgcgcacgtc
aacggctgggccaacggcgcctaccccggctcggtggcggcggcggcggccgccgcggcc
atgatgcaggaggcgcagctggcctacgggcaacatccgggcgcgggcggcgcgcacccg
cacgcgcacccggcgcacccgcacccgcaccacccgcacgcgcacccgcacaacccgcag
cccatgcaccgctacgacatgggcgcgctgcagtacagccccatctccaactcgcagggc
tacatgagcgcctcgccctcgggctacggcggcctcccctacggcgccgcggccgccgct
gccgccgccgcgggcggcgcgcaccagaactcggccgtggcggcggcggcggcggcggcg
gccgcgtcgtcgggcgccctgggcgcgctcggctcgctcgtcaagtcggagccgagcggc
agcccgccggccccggcgcactcgcgggcgccgtgccccggggacctgcgcgagatgatc
agcatgtacttgccggccggcgagggcggcgacccggcggcggcggccgcagccgcggcg
cagagccggctgcactcgctgccgcagcactaccagggcgcgggcgcgggcgtcaacggc
acggtgcccctgacgcacatctag
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