Balaenoptera musculus (blue whale): 118884199
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Entry
118884199 CDS
T09887
Symbol
PCDH20
Name
(RefSeq) protocadherin-20
KO
K16498
protocadherin delta 1
Organism
bmus
Balaenoptera musculus (blue whale)
Pathway
bmus03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
bmus00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
118884199 (PCDH20)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
bmus01009
]
118884199 (PCDH20)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
bmus04515
]
118884199 (PCDH20)
Protein phosphatases and associated proteins [BR:
bmus01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
118884199 (PCDH20)
Cell adhesion molecules [BR:
bmus04515
]
Cadherins
Protocadherins
118884199 (PCDH20)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_FAT4_N
Cadherin_2
Cadherin_CELSR2_9th
He_PIG
Motif
Other DBs
NCBI-GeneID:
118884199
NCBI-ProteinID:
XP_036687552
UniProt:
A0A8B8VSV8
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All DBs
Position
18:complement(34759967..34772183)
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AA seq
950 aa
AA seq
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MRGRGDACSSRALPVSWRPATWHPRLDMGRLSRSRSSTSHRNLPHLLLFFLFVGPFNCLA
SYGRATELLYSLNEGLPAGVLIGSLAEDLRLVPGAGRQDTQSQPPEHSGAERNPPLSFSL
ASQGLSGQYVTLDNRSGELHTSAQEIDREALCLEGGGGAAWGGSISISSSPSADSCLLLL
DVLVLPQEYFRFVKVKIAIRDINDNAPQFPVSEISVWVPENAPVNTRLAIEHPAMDRDIG
TNGVQTYRLLDYHRMFTLDVEENENGERTPYLIVMGLLDRETQDQYVSIIIAEDGGSPPL
LGSATLTIGISDINDNCPLFTDSQINVTMYGNATVGTPIAAVQAVDRDLGNNAQITYSYS
QKVPQASKDLFHLDENTGVIKLFSKIGGSVLQTHKLTILANGPGCIPAVITALVTIIKVI
FRPPEIVPRYIVNEIDGIVYLKELEPVNTPIAFFTIRDPEGKYKVNCYLDGEGPFRLSPY
KPYSNEYLLETTKPMDYELQQFYEIAVVAWNSEGFHVKKMIKVQLLDDNDNAPIFLQPLV
ELTIEENNSPNAFLTKLDATDADSGERGQVSYFLGPDAPSYFSLDSVTGVLTVSTQLDRE
EKEKYKYTVRAVDSGKPPKESVATVAITVLDKNDNSPRFINKDFSFFVPENFPGYGEIGV
ISVTDADAGQNGWVALSVVNQSDIFVIDTGKGMLRAKVSLDREQQSSYTLWVEAVDGGEP
PLSSTTEITILLLDINDNPPLVLFPQSNMSYLLVLPSTLPGSPVTEVYAVDKDTGMNAVI
VYSIIGRRGPRPESFRIDPKTGNITLEEALLQTDYGLHRLLVKVSDHGYPEPLHSTVMVN
LFVNDTVSNESYIESLLRKEPEINIEEKEPQISIEPTHRKVEPVSCMPTLVALSVISLGS
ITLITGMGIYICLRGKRHHREDENLEVQIPLKGKTDLHMRERKPMDISNI
NT seq
2853 nt
NT seq
+upstream
nt +downstream
nt
atgcgcggccgaggggatgcgtgcagctcgcgggccctgccagtgagctggcgcccggca
acctggcacccgcgcctggatatggggcgtctaagtcgttccaggagcagcaccagccac
agaaacctaccgcatctgcttctgtttttcctcttcgtgggacccttcaactgcctggcg
agttacggccgcgccacggagcttctgtacagcctaaacgagggactgcccgcgggggtg
ctcatcggtagcctggccgaggacctgcggctggtgcccggagcagggaggcaggacacg
cagtcgcagcccccagagcacagcggcgccgagcggaaccctcctctctccttcagcctg
gcctcccagggactgagtggccagtacgtgaccctggacaaccgctccggggagctgcac
acttctgcccaggagatcgacagggaggccctgtgtcttgaaggaggtggaggggctgcc
tgggggggcagcatttccatctcctcttcgccttccgctgactcttgtcttttgcttctg
gatgtactggtcctgcctcaggaatactttaggtttgtgaaggtgaaaatcgctatccgg
gacatcaatgacaatgccccacagttccctgtttccgaaatatcggtttgggtcccagaa
aatgcacctgtaaacacccggctggccatagagcatcctgccatggaccgagatataggc
actaatggagttcagacctaccgcttgctggactaccatcgtatgttcaccctggacgtg
gaggagaatgagaatggggagcgaaccccctacttaattgtcatgggactgttggacagg
gagacccaggaccagtatgtgagcatcatcatagctgaggatggtgggtctccaccactg
ttgggcagtgccaccctcaccattggcataagtgacattaatgacaattgtcctctcttc
acagactcacaaatcaatgtcactatgtatgggaatgctacagtgggcacaccaattgca
gctgtccaggctgtggacagagacttgggaaacaatgctcagatcacctactcttacagc
cagaaagttccacaagcatccaaggatttattccatctggatgaaaacactggagtcatt
aaacttttcagtaagattgggggaagtgttctgcaaacacacaagctcaccattcttgct
aatgggccgggctgcatccctgctgtgataactgccctggtgaccattatcaaagtcatt
ttcagaccacctgaaattgtccctcgttatatagtgaatgagatagatggtatagtttac
ctgaaagaactggaacctgttaacactccaattgcatttttcaccataagagatccagaa
ggtaaatacaaggtgaactgctacttggatggtgaaggaccatttaggttatcaccctac
aaaccatacagtaatgagtatctgctagaaaccacaaaacctatggattatgagctacag
cagttctatgaaatagctgtggtagcctggaactctgagggatttcatgtcaaaaaaatg
attaaagtgcaacttttagatgacaatgataatgctcctattttccttcaacccttggtg
gaactaaccattgaagaaaacaactcacccaatgcctttttgactaagctagatgctaca
gatgctgacagtggagagaggggacaagtttcatattttctgggacctgatgctccatca
tatttttccttagacagtgtcacaggagttctgacagtttctactcagctggatcgagaa
gagaaagaaaagtacaagtacacagtcagagctgttgactctgggaagccacccaaagaa
tcagtagccaccgtggctatcacagtgttggataaaaatgacaacagtcctaggttcatc
aacaaggacttcagcttctttgtgccagaaaactttccaggatatggtgaaattggagta
attagtgtaacagatgccgatgctgggcaaaatggatgggttgccctctccgtggtgaac
cagagtgatatttttgtcatagacacaggaaagggcatgctgagagccaaagtctctttg
gacagagagcagcaaagctcctatactttgtgggttgaagctgttgatggaggtgagcct
cccctctcctctaccacagaaatcacaattctccttctagatatcaatgacaacccacct
cttgttttatttcctcaatctaacatgtcttacctgttggtattaccttctactctccct
ggctccccagttacagaggtctatgcagttgacaaagacacaggcatgaatgctgtcata
gtttacagcatcatagggagaagaggtcctaggcctgagtcctttaggattgaccctaaa
actggcaacattactttggaggaggcattgctgcagacagattatgggctccatcgttta
ctggtgaaagtgagtgatcatggttatcccgaacctctccattccacggtcatggtgaac
ctatttgtcaatgacactgtcagtaatgagagctacattgagagtcttttaagaaaggaa
ccagaaattaacatagaggagaaagaaccacagatctcaatagaaccgactcataggaaa
gttgagcctgtgtcttgtatgcccaccttagtagctctgtctgtaataagcttgggttct
atcactctcataacagggatgggcatatacatctgtttgagagggaaaaggcatcacagg
gaggatgaaaatttggaagtacaaattccactaaaaggaaaaactgacttgcatatgaga
gagaggaaaccaatggatatttctaatatttga
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