Balaenoptera musculus (blue whale): 118884728
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Entry
118884728 CDS
T09887
Name
(RefSeq) ATP-dependent RNA helicase DDX19B isoform X1
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
bmus
Balaenoptera musculus (blue whale)
Pathway
bmus03013
Nucleocytoplasmic transport
bmus03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
bmus00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
118884728
03015 mRNA surveillance pathway
118884728
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bmus03019
]
118884728
Enzymes [BR:
bmus01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
118884728
Messenger RNA biogenesis [BR:
bmus03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
118884728
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
118884728
NCBI-ProteinID:
XP_036688452
UniProt:
A0A8C0DUZ4
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All DBs
Position
19:complement(47405189..47425697)
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AA seq
484 aa
AA seq
DB search
MAWAASPFRGRAVGRFPLAQPVGDLSNLHLKEEKIKPDANGAVVKTNANAEKADEEEKED
RAAQSLLNKLIRSNLVDNTNQVEVLQRDPNSPLYSVKSFEELRLKPQLLQGVYAMGFNRP
SKIQENALPLMLAEPPQNLIAQSQSGTGKTAAFVLAMLSQVEPANRYPQCLCLSPTYELA
LQTGKVIEQMGKFYPELKLAYAVRGNKLERGQKISEHIVIGTPGTVLDWCSKLKFIDPKK
IKVFVLDEADVMIATQGHQDQSVRIQRMLPRNCQMLLFSATFEDSVWKFAQKVVPDPNII
KLKREEETLDTIKQYYVLCSSRDEKFQALCNIYGAITIAQAMIFCHTRKTASWLAAELSK
EGHQVALLSGEMVVEQRAAVIERFREGKEKVLVTTNVCARGIDVEQVSVVINFDLPVDKG
GNPDNETYLHRIGRTGRFGKRGLAVNMVDSKHSMNILNRIQEHFNKKIERLDTDDLDEIE
KIAN
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atggcctgggctgctagcccgttccgaggtcgcgccgtagggcgctttccgctcgcccag
cctgtgggcgacttgagcaacttgcatcttaaggaagagaaaatcaaaccagatgccaat
ggtgctgtggtcaagaccaatgctaatgcagagaaggcagatgaagaagagaaagaggac
agagccgcccagtccttactcaacaagctaatcagaagcaaccttgtcgataacaccaac
caagtggaagtcctgcagcgggatccaaactccccactctactcagtgaagtccttcgag
gagcttcggctgaaaccacagcttctccagggagtctacgccatgggcttcaaccgtcca
tcgaagatacaagagaacgcattgcctttaatgcttgctgagcccccacagaacttaata
gcccagtctcagtctggtactggtaaaacagctgcctttgtgttggccatgctcagccaa
gtagaacctgcaaacagatacccccagtgtctgtgcctctccccaacttacgagctcgct
cttcaaacgggaaaagtgattgagcagatgggcaaattttaccctgaactgaagctagct
tatgctgttcgtggcaataaattggaaagaggtcagaagatcagtgagcacattgtcatt
ggcacccctgggaccgttctggactggtgctccaagctcaagttcattgaccccaagaag
atcaaggtgtttgttctggatgaggctgacgtgatgatagctactcagggccaccaagat
cagagcgtccgcatccagaggatgcttcccaggaactgccagatgctgcttttctctgcc
accttcgaagactccgtctggaaatttgcccagaaggtggtcccagacccaaacatcatc
aaactgaagcgcgaggaggagacattggacaccatcaagcagtattacgtcctgtgcagt
agcagagatgagaagttccaggccttgtgtaatatctacggggccatcaccattgctcaa
gccatgatcttctgccacacgcgcaaaacagctagttggctggcagcagagctgtcgaaa
gaaggccaccaggtggctctgctgagtggtgaaatggtggtggagcagagggctgcagtg
attgagcgcttccgagagggcaaagagaaggttctggtcaccaccaacgtgtgtgcccgc
ggtatcgatgtggaacaggtgtctgtcgtcatcaactttgaccttcccgtggacaagggt
gggaacccggacaacgagacctacctgcaccggatcgggcgcaccggccgctttggcaag
aggggcctggccgtgaacatggtggacagcaagcacagcatgaacatcctgaacaggatc
caggagcatttcaataagaaaatagaaagactggacacagatgacttggacgagattgag
aaaatagccaactga
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