Balaenoptera musculus (blue whale): 118884741
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Entry
118884741 CDS
T09887
Symbol
SUPT5H
Name
(RefSeq) transcription elongation factor SPT5 isoform X1
KO
K15172
transcription elongation factor SPT5
Organism
bmus
Balaenoptera musculus (blue whale)
Pathway
bmus03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
bmus00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
118884741 (SUPT5H)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bmus03021
]
118884741 (SUPT5H)
03019 Messenger RNA biogenesis [BR:
bmus03019
]
118884741 (SUPT5H)
Transcription machinery [BR:
bmus03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
118884741 (SUPT5H)
RNA polymerase I system
118884741 (SUPT5H)
Messenger RNA biogenesis [BR:
bmus03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
118884741 (SUPT5H)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KOW
KOW4_SPT5
KOW5_SPT5
KOW2_Spt5
KOW7_SPT5
Spt5-NGN
KOW6_SPT5
KOWx_SPT5
Spt5_N
KOW1_SPT5
GPKOW_C
DUF3912
Ribonuc_P_40
Motif
Other DBs
NCBI-GeneID:
118884741
NCBI-ProteinID:
XP_036688479
UniProt:
A0A8C0E2E2
LinkDB
All DBs
Position
19:complement(13792952..13819431)
Genome browser
AA seq
1087 aa
AA seq
DB search
MSDSEDSNFSEEEDSERSSDGEEAEVEEERRSAAGSEKEEEPEEEEEEEEEEEYDEEEEE
EDDDRPPKKPRHGGFILDEADVDDEYEDEDQWEDGAEDILEKEEIEASNIDNVVLDEDRS
GARRLQNLWRDQREEELGEYYMKKYAKSSVGETVYGGSDELSDDITQQQLLPGVKDPNLW
TVKCKIGEERATAISLMRKFIAYQFTDTPLQIKSVVAPEHVKGYIYVEAYKQTHVKQAIE
GVGNLRLGYWNQQMVPIKEMTDVLKVVKEVANLKPKSWVRLKRGIYKDDIAQVDYVEPSQ
NTISLKMIPRIDYDRIKARMSLKDWFAKRKKFKRPPQRLFDAEKIRSLGGDVASDGDFLI
FEGNRYSRKGFLFKSFAMSAVITEGVKPTLSELEKFEDQPEGIDLEVVTESTGKEREHNF
QPGDNVEVCEGELINLQGKILSVDGNKITIMPKHEDLKDMLEFPAQELRKYFKMGDHVKV
IAGRFEGDTGLIVRVEENFVILFSDLTMHELKVLPRDLQLCSETASGVDVGGQHEWGELV
QLDPQTVGVIVRLERETFQVLNMYGKVVTVRHQAVTRKKDNRFAVALDSEQNNIHVKDIV
KVIDGPHSGREGEIRHLFRSFAFLHCKKLVENGGMFVCKTRHLVLAGGSKPRDVTNFTVG
GFAPMSPRISSPTHPSAGGQRGGFGSPGGGSGGMSRGRGRRDNELIGQTVRISQGPYKGY
IGVVKDATESTARVELHSTCQTISVDRQRLTTVGSRRPGGMTSTYGRTPMYGSQTPMYGS
GSRTPMYGSQTPLQDGSRTPHYGSQTPLHDGSRTPAQSGAWDPNNPNTPSRAEEEYEYAF
DDEPTPSPQAYGGTPNPQTPGYPDPSSPQVNPQYNPQTPGTPAMYNTDQFSPYAAPSPQG
SYQPSPSPQSYHQVAPSPAGYQNTHSPASYHPTPSPMAYQASPSPSPVGYSPMTPGAPSP
GGYNPHTPGSGIEQNSSDWVTTDIQVKVRDTYLDTQVVGQTGVIRSVTGGMCSVYLKDSE
KVVSISSEHLEPITPTKNNKVKVILGEDREATGVLLSIDGEDGIVRMDLDEQLKILNLRF
LGKLLEA
NT seq
3264 nt
NT seq
+upstream
nt +downstream
nt
atgtcggacagcgaagacagcaacttctccgaggaggaggacagcgagcgcagcagtgac
ggcgaggaggccgaggtagaggaggagcggcggagtgcagcaggtagtgagaaggaggaa
gagcctgaggaagaagaggaggaggaagaggaggaggaatatgatgaggaagaggaggag
gaagatgatgaccggccccccaagaaaccccgccatggcggcttcattctggatgaggct
gatgtggacgatgagtatgaggatgaggaccagtgggaggatggagcagaggacatcctg
gagaaagaagagattgaagcctccaatatcgacaatgttgtcttggatgaagaccgttct
ggggctcgccgcctgcaaaacctctggagggaccagcgagaagaagaactgggcgagtat
tacatgaagaaatacgcaaagtcatctgtgggagagacggtgtatggaggatccgatgag
ctctcggatgacatcacccagcagcagctgctcccgggagtcaaggatcccaatctgtgg
actgtcaaatgtaagattggggaggaacgggccacagccatttccttgatgcgcaagttc
attgcctaccagttcacagacacgcccctgcagattaagtcggtagtggcaccagagcat
gtgaagggctacatctacgtggaggcctacaagcagacccatgtgaagcaggccatcgag
ggcgtgggcaacctgcggcttggctactggaaccagcagatggtacccatcaaggagatg
acagatgtgctcaaagtggtgaaggaggtggccaacctgaaaccaaaatcctgggtccgc
ctcaagcggggcatctataaggacgacatcgctcaggtggattatgtggagcccagccaa
aacaccatctccctgaagatgatcccgcgcatcgactacgaccgcatcaaggcccgcatg
agcttgaaagactggtttgccaaaaggaagaagtttaagcggcctccacagaggctgttt
gatgcagaaaagatcaggtccctggggggtgacgttgcctctgatggtgacttcctcatc
ttcgaggggaaccgttacagccggaagggctttctgttcaagagctttgccatgtctgct
gtgatcacggagggtgtgaagcccacactctctgagctggagaaatttgaggaccagcca
gagggcatcgacctcgaggtggtgactgaaagcacagggaaggagcgggagcacaacttc
cagcctggggacaacgtggaggtgtgtgagggtgagctcatcaacctgcagggcaagatc
ctcagcgtagatggcaacaagatcaccatcatgcccaagcacgaggacctcaaggacatg
ctggagttcccggcccaggaacttcggaagtacttcaagatgggggaccacgtgaaggtg
attgccggccggttcgagggcgacacaggcctcattgtgcgggtggaggagaacttcgtc
atcctcttctctgacctcaccatgcacgagctgaaggtgctcccccgggacctgcagctc
tgctcggagacggcatcaggtgtggatgtcgggggccagcatgaatggggggagctggtg
cagctggacccccagaccgtgggtgtcatcgtgcgactggagcgggagaccttccaggtg
ctgaacatgtatgggaaggtggtgactgtcaggcaccaggctgtgacccggaagaaggac
aaccgctttgccgtggccctggactcagagcagaacaacatccatgtgaaagacattgtc
aaggtcattgatggcccccactcaggccgggagggcgagattcgccatctcttccgcagc
ttcgccttcctgcattgcaagaaactggtagagaacgggggcatgtttgtctgcaagacc
cgccatctggtgctggcagggggctcgaagccgcgagatgtgaccaacttcacagtaggc
ggctttgcccccatgagcccccggatcagcagccccacgcaccccagtgctggaggtcag
cgtggtggctttggcagcccgggcggcggcagtggcggcatgagcaggggccggggacgg
agagacaacgagctcatcggtcagactgtgcgcatctcccaggggccttacaaaggctac
attggcgtggtaaaagatgccacggagtccacagcccgcgtggagctgcactccacctgc
cagaccatctcagtggaccgtcaacgcctcaccacggtgggctcacggcgcccgggcggc
atgacctcgacctatgggcggacacccatgtatggctcccagacgcccatgtacggctct
ggctcgcgcacgcccatgtacggctctcagacgcctctccaggatggtagtcgcaccccg
cattacggctctcagacgcccctgcatgatggcagccgcactcctgcccagagtggggcc
tgggaccccaacaatcctaacacaccatcacgggctgaggaagaatatgagtacgcgttc
gatgatgagccgaccccatccccacaggcctatgggggcacccccaatccccaaacacct
ggctacccagacccctcatccccgcaggtcaacccgcagtacaacccacagacgccaggg
acgccagccatgtacaacacagaccagttctccccctatgcagccccctccccgcaaggc
tcctaccagcccagccccagcccccagagctaccaccaggtggcgccaagcccagcaggc
taccagaacacccactccccagccagctaccaccccaccccctcgcccatggcctatcag
gccagccccagcccgagccctgttggctatagtccgatgacacctggagctccctcccct
ggtggctacaacccgcacacaccaggctcaggcattgagcagaactccagcgactgggtg
accactgacatccaggtgaaggtgcgggacacctacctggatacccaagtggtggggcag
acaggcgtcatccgcagtgtcacgggaggcatgtgctccgtatacctgaaggacagcgag
aaggttgtcagcatctccagtgagcacctggagcccatcaccccgaccaagaacaacaag
gtgaaggtgatcctgggtgaggatcgggaagccacaggtgtcctgctgagcattgatggc
gaggatggcatagtccgcatggacctggatgaacagctcaagatcctcaacctccgcttc
ctggggaagctcctggaggcctga
DBGET
integrated database retrieval system
