Balaenoptera musculus (blue whale): 118885194
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Entry
118885194 CDS
T09887
Symbol
CHD9
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 9 isoform X1
KO
K14438
chromodomain-helicase-DNA-binding protein 9 [EC:5.6.2.-]
Organism
bmus
Balaenoptera musculus (blue whale)
Brite
KEGG Orthology (KO) [BR:
bmus00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
bmus03036
]
118885194 (CHD9)
Chromosome and associated proteins [BR:
bmus03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
118885194 (CHD9)
BRITE hierarchy
Motif
Pfam:
SNF2-rel_dom
BRK
Helicase_C
Chromo
ResIII
DEAD
HDA2-3
Motif
Other DBs
NCBI-GeneID:
118885194
NCBI-ProteinID:
XP_036689537
EnsemblRapid:
ENSBMSG00010015871
LinkDB
All DBs
Position
19:29229172..29474562
Genome browser
AA seq
2902 aa
AA seq
DB search
MTDPMMDFFDDANLFGETLEGLSDDAFVQPGPVSLVDELNLGAEFEPLHIDSLNHVQGTP
THQKMTDYEQLNQFDSMKFHQVNQSFGSPAEHVLSPHSQFNCSPIHPQNQPNGLFPDVAD
GSPMWGHQTATSISSQNGSPFHQQGHSHSMHQTKSFVAHHDFALFQANEQQTQCTSLRSQ
QNRNNLNPGQNSLSQSKNFMDVNVSGPHRVSVNHPPQINNASTSQQSLSMQQFSQTSNPS
VHFLKCSNHQEGNFNGPSPNMTSCSVSNSQQFSSHYSFSSNHVSPNNLLQSSAVLAPNHT
NQTLSDFTGSNSFSPHRGIKQESTQHMLNPNTSLHSNNFQMLHSSHPQGNYSNSKLSPVH
MNFPDPVDSGTQMGHFNDHVETNGFSSLEENLLHQVESQTEPFTGLDPEDLLQEGLLPQF
DESAFGQDNSSHVLDHDLDRQFTSHLVTRPSDMAQTQLHTQARSWHSSLSNHQHLHDRNR
LCLQRQPPSSKKSDGSGTYTKLQNTQVRIMSEKKQRKKVESESKQEKANRIISEAIAKAK
ERGERNIPRVMSPENFPSASVEGKEEKKGRRMKSKPKDKESKKTKTCSKLKEKTKIGKLI
ITLGKKQKRKNESSDEISDAEQVPQHAFKEEDSQKRRSNRQIKRKKYAEDAEGKQSEEEV
KASIKIKKHSAPLPGEQPLQLFVENPSEEDAAIVDKILSSRIIKKEISPGVMIDTEEFFV
KYKNYSYLHCEWATEQQLLKDKRIQQKIKRFKLRQAQRAHFFADMEEEPFNPDYVEVDRV
LEVSFCEDKDTGEPVIYYLVKWCSLPYEDSTWELKEDVDLAKIEEFEQLQASRPDTRHLD
RPPSNIWKKIDQSRDYKNGNQLREYQLEGLNWLLFNWYNRRNCILADEMGLGKTIQSITF
LYEILLTGIRGPFLIIAPLSTIANWEREFRTWTDINVVVYHGSLISRQMIQQYEMYFRDS
QGRIIRGAYRFQAIITTFEMILGGCGELNAIEWRCVIIDEAHRLKNKNCKLLEGLKLMNL
EHKVLLTGTPLQNTVEELFSLLHFLEPLRFPSESTFMQEFGDLKTEEQVQKLQAILKPMM
LRRLKEDVEKKLAPKEETIIEVELTNIQKKYYRAILEKNFSFLSKGAGQTNVPNLVNTMM
ELRKCCNHPYLIKGAEEKILGEFRDTYNPAASDFHLQAMIQSAGKLVLIDKLLPKMKAGG
HKVLIFSQMVRCLDILEDYLIHKRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCT
RAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQNKAVKVYRLVTRNSYEREMFD
RASLKLGLDKAVLQSMSGRESNVGGIQQLSKKEIEDLLRRGAYGAIMEEEDEGSKFCEED
IDQILLRRTKTITIESEGRGSTFAKASFVASGNRTDISLDDPNFWQKWAKKAEIDIDAIS
GRNSLVIDTPRIRKQTRPFSATKDELAELSEAESEGDEKPKLRRPCERSNGYGRTECFRV
EKNLLVYGWGRWREILSHGRFKRQLNEHDVEIICRALLAYCLVHYRGDEKIKGFIWDLIT
PTEDGQTRELQNHLGLSAPVPRGRKGKKVKTQTSSFDIQKAEWLRKYNPEQLLQDEGYKK
HIKHHCNKVLLRVRMLYYLKQEVIGNECQKVFDGVDASDIDVWVPEPDHSEVPAEWWDFD
ADKSLLIGVFKHGYEKYNTIRADPALCFLERVGKPDEKAVAAEQRANDYMDGDVEDPEYK
PAPAIFKDDTEDDVSSPGDLVIADGDGQLMEGDKIYWPTQSALTTRLRRLITAYQRTNKN
RQIQQIQPAFSVPASVMQPLYEEATLNPKMAAKIERQQRWTRREEADFYRVVSTFGVVFD
PDRGQFDWTKFRAMARLHKKTDDSLEKYLYAFMSMCRRVCRLPSKDELVDPNIFIQPITE
ERASRTLYRIELLRKVREQALRHPQLFERLKLCHPNPDLPVWWECGPHDRDLLIGAAKHG
VSRTDYHILRDPELSFMAAQRNYSQSKMAHSRTSTPLLQQYQVALSASPLTSLPRLLDPK
GIILEDVKVKSENLKEEPQFSEEESMTSEETRTLIKSEPVSPKNGVLPQATGDQKSGGKG
ETDRRMVAARTEPLTPNPASKKQRVHKRGSESSSDSDSDSERSSCSSRSSSSSSSSSSCS
HSRSGSSSSSSSSCSSASSSSSSSSSSSSSSSSSSSEESDSEEEEVQKRAEGTPHVKAYD
EESVASLSTTQDETQDSFQMNNGTPESAYILQGGYMLAASYWPKDRVMINRLDSICQTVL
KGKWPSARRSYDANAVASFYTTKLLDSSGAATEHSEPSVPTPAGAGVKEEHDQSTQMSKV
KKHVREKEFTVKIKDEGGLKLTFQKQGLAQRRPLDSEDGALGQQQYLTRLRDLQGASETS
LASFPKSMPGSGTPIQSTLGANGVLLDNQPVVKKRRGRRKNVEGVDILFFNRNKPPNHVT
LGLTTSQISTGINPALSYTQPQGIPDTESPVPVINLKDGTRLAGDDAPKRKDLEKWLKEH
PGYVEDLGAFIPRMQLHEGRPKQKRHRCRNPNKLDVNSLTGEERVQLINRRNARKVGGAF
APPLKDLCRFLKENTEYGVAPEWGDVVKQSGFLPESMYERILTGPVVREEVSRRGRRPKS
GIAKATAAAAAATATSISGNPLLANGLLPGVDLTTLQALQQNLQNLQSLQVTAGLMGMPA
GLSSGGEAKNVAAMFPMLLSGMTGLPNLLGMGGLLTKPTESGTEEKKGNDSKELEGKKER
TESQNSENSGENSVSSSPSTSSTAALSTAAAANPLALNPLLLSNILYPGMLLTPGLNLHI
PTLSQSNTFDVQKNKNSDLGSSKSVEVKEEDSRVRDQEDKGGTEPSPLNENSTDEGSEKA
DASSGSDSTPSSSEDSDSSNED
NT seq
8709 nt
NT seq
+upstream
nt +downstream
nt
atgacagatccaatgatggacttttttgatgatgccaatctgtttggtgagaccttagaa
ggtttgtcagatgatgcatttgtacaaccaggacctgtttcactagttgatgaattgaac
ttgggtgcagaatttgaacctttgcacatagactcactgaaccatgttcaaggtactcca
acacatcagaagatgactgattatgaacagttaaatcagtttgattcaatgaaatttcac
caagttaatcagtcttttggtagcccagctgaacatgtgttatctccacactctcagttt
aattgttctccgatccaccctcagaaccaacccaatggtttgtttccagatgtagcagat
ggcagtccaatgtggggccatcagacagctactagcatttcaagtcaaaatgggtctcct
tttcaccaacaaggacattctcactctatgcatcaaactaaaagctttgtggcacaccat
gactttgccttatttcaggccaatgaacaacaaacacagtgcacttcgctacgctcacaa
caaaacagaaataatcttaacccagggcaaaattctcttagccagtctaaaaattttatg
gatgttaatgtttctggtccacacagagtcagtgttaaccatccaccacaaattaataat
gcatctacttcacaacagtccctttcgatgcagcaattttctcaaacgtcaaatccttca
gtacacttcctgaagtgtagcaatcatcaagaaggaaattttaatggaccttctccaaat
atgacttcttgttctgtcagtaattcacagcagttttcttcacattattccttttccagt
aatcatgtgtcaccaaataatcttcttcagtcctctgcagttcttgcacctaatcataca
aatcagactttatctgattttactgggagtaattccttttcacctcataggggaatcaag
caagaatcgactcagcatatgctaaatcccaatacatcgctgcattcaaataacttccaa
atgttgcattcatcacatcctcagggtaattacagcaattcaaaattatctcctgttcac
atgaacttcccggatcctgttgactcaggaactcaaatgggccatttcaatgatcatgta
gaaactaatggcttttcatctttagaagagaatttacttcatcaagtggaatctcaaact
gagccattcacaggacttgacccagaagacctccttcaggagggtctccttccccagttt
gatgagtcagcttttgggcaagataattcaagtcatgttttagatcatgaccttgatcgg
caatttacttcacatcttgtaacacggccttctgatatggctcaaactcagttgcatact
caggctcggagttggcattcatcactttctaatcatcagcatttacatgacagaaatcgc
ctatgtttacagcgacagcctccatcttccaagaagagtgatggttctgggacatatact
aagttgcagaatacccaggtgaggatcatgtccgagaagaagcagagaaaaaaggtggaa
tcagaaagcaagcaagaaaaggctaatcgtataatatcagaggccatagcaaaagcaaag
gagcgtggggaacgcaatattccacgagtaatgagccctgaaaactttcctagtgcttca
gttgaaggaaaagaggaaaagaaaggtagaaggatgaaatctaagccaaaggacaaagag
agcaaaaaaacaaaaacttgttctaagttaaaagagaagacaaaaattggcaaactcatt
attacattgggtaagaagcaaaaaagaaagaatgagtcttcagatgaaatatctgatgca
gagcaggtgccacagcatgcattcaaagaggaagactctcaaaaaagaagatcaaatcga
caaattaaaagaaaaaaatatgcagaagatgcagaagggaaacaatctgaagaagaggtt
aaagcttctataaaaataaaaaagcattcagctcctttacctggtgaacagcctttacag
ttatttgtggagaatccgagtgaagaagatgctgcaattgtggacaaaatactatcttct
agaattataaaaaaggaaatatcacctggagtgatgattgatacagaagaattttttgta
aaatacaagaattactcctatcttcactgtgagtgggccacagaacagcagcttctgaaa
gataaaaggatccagcagaaaatcaaacgattcaaattgagacaagcacaaagagcacat
ttttttgcagacatggaagaagaaccatttaacccagactacgttgaagtagacagagta
ttagaagtctctttttgtgaagataaagatactggtgagcctgttatttactacttagta
aagtggtgctcattaccatatgaagatagtacttgggaactaaaagaagatgtagatctt
gcaaaaatagaagagtttgaacagttgcaagcttcacggcctgacacaagacatttggac
cgtcctccttctaatatttggaaaaaaatagatcaatccagggattataaaaatggcaat
caactcagggaatatcaactggaaggactcaactggctcttattcaactggtacaataga
cgaaactgcattttagcagatgaaatgggtcttggcaaaaccattcaatcaattacattc
ctctacgaaatccttctgactggtataagaggacctttcctgattattgctccactttct
actattgcaaactgggagagagaatttcgtacgtggactgatattaatgttgtggtttat
catgggagcctgattagcagacaaatgatacagcaatatgagatgtacttcagggactca
caggggcgaatcattcgaggagcttacagattccaagccatcatcaccacttttgaaatg
attcttggaggctgtggagagcttaatgcaattgaatggcgatgtgtgattattgatgaa
gcacataggttaaaaaataaaaattgtaaacttctagaaggtctgaaactcatgaatctg
gagcacaaggtgcttttgactggcacacctctccaaaatacagttgaagaactattcagt
cttcttcactttctggaacccttaaggtttccttctgaatcaacgttcatgcaagaattt
ggggatctgaaaacagaggaacaggtgcagaaacttcaggctatcttgaaaccaatgatg
ttgaggcgattgaaagaagacgtggaaaagaagttggcacctaaggaagaaaccatcatt
gaagtggaacttactaacattcagaagaaatactaccgggctattctggagaagaacttt
tcgtttttatccaaaggagcaggacagactaatgtacccaacttggtcaataccatgatg
gagctcaggaagtgctgtaatcacccatatcttatcaaaggtgctgaggagaaaatactt
ggagaatttagagatacatataatccagctgcttctgattttcatcttcaagcaatgatc
cagtctgctggtaaattggtccttattgataaattgcttcctaaaatgaaagcaggaggt
cataaagtgctcatcttctctcagatggtacgctgccttgatatcctggaggactatctt
atacataaaagatatttatatgagcgaattgatggaagagtcagggggaatcttcgacaa
gctgctatagatcgatttagtaaacctgattcagatcgatttgtctttcttctgtgtacc
cgagctggtgggttgggcatcaacttaactgcagctgatacatgtataatttttgattct
gattggaatcctcaaaacgaccttcaggcccaagctcgttgccacagaatcggtcagaat
aaggcagttaaagtctaccgactagtaactcgtaactcatatgaaagagagatgtttgac
cgagccagtctgaaactgggtctagataaggctgtattacagagcatgagtggaagagaa
agtaatgttggtggtattcaacagctttccaaaaaggaaatagaagatctgcttcgaaga
ggtgcttatggtgccattatggaagaagaagatgaaggctctaaattctgtgaagaagat
attgatcagattttactacgtcgtacaaaaaccattacaattgaatcagaaggacgtggg
tcaacatttgccaaggcaagttttgtggcatctggaaaccgaacagatatttccttagat
gatcccaacttctggcaaaaatgggcgaaaaaggcagaaatagatatagatgccatcagt
ggtagaaacagcttggttattgacactccaagaattaggaaacaaacaagacccttcagt
gccacaaaagatgaattggctgaattatctgaagctgaaagtgaaggagatgaaaagccc
aaactccggagaccctgtgagcgttcgaatggctatggaagaactgaatgctttagagta
gagaaaaatctgctagtttatgggtggggccgatggagagagattttgtctcatggccgt
tttaaaaggcagctaaatgagcacgatgtggaaataatttgccgagccctcttagcttat
tgccttgttcactaccgaggagatgagaaaattaaaggcttcatatgggatctcattact
ccaactgaagatgggcagacaagagagctacaaaatcatctaggcctgtcagcccctgta
cccagaggtcgaaaagggaagaaagtaaagactcaaacaagctcatttgatatacaaaaa
gcagaatggcttcgaaaatacaatcctgagcagctacttcaggatgaaggctacaaaaaa
catataaaacaccactgtaataaagtcttgcttcgtgtaagaatgctgtattatctaaaa
caagaagtcattggaaatgagtgtcagaaagtgtttgacggagttgatgcaagtgacatt
gatgtttgggtcccagaaccagaccactcagaagttcctgctgaatggtgggattttgat
gctgataagtcactccttattggagtttttaaacatggttatgaaaaatataacactatc
cgagcagacccggcattatgcttcttggaaagagtgggaaaacctgatgagaaagcggtt
gctgcagaacagagggcaaacgattatatggatggggatgtggaagatccagaatacaaa
cctgccccagctatctttaaagatgatacagaggatgatgtttcctcaccaggagatctt
gttatagcagatggagatggtcaactgatggagggtgataaaatttattggcctactcag
tcagctttaaccacacgtttgaggcgtctcatcactgcatatcagcgtactaataaaaac
agacaaatccagcagatacaacctgctttctcagtgcctgccagtgttatgcagcctctt
tatgaagaagccactcttaatcctaaaatggcagccaagatagaaagacagcagagatgg
acaagaagagaagaagctgacttttatagagttgtatctacatttggagtggtgtttgat
cctgacagaggccaatttgattggacaaaatttagagctatggctaggctacataagaaa
actgatgatagtttggagaaatatttgtatgcattcatgtctatgtgtcggagggtttgt
cgtcttccttccaaagacgaattggtggatccaaatatttttatccagccaatcacagaa
gaacgtgcttctaggactttatatcgcattgaacttctaaggaaagtaagggaacaggcc
ctccgacatccacagttgtttgagcgcttgaagctttgccatccaaatccagacttacca
gtctggtgggagtgtggccctcatgatagggacttgctcattggagctgctaaacacggg
gtgagccggacagactatcacattcttcgtgatcctgaactctcatttatggcagctcaa
aggaactacagtcaaagtaagatggctcattcaaggacttctaccccacttttacagcaa
tatcaagtagcactttctgcttctcctcttacctctctacctaggctcctagatcctaaa
ggtattattctagaggatgtgaaagttaaaagtgaaaaccttaaagaggagcctcagttt
tctgaagaagaatctatgacttctgaggaaaccaggacactaataaagtctgagcctgta
agtccaaagaatggtgttttaccacaggctactggagaccagaaatctggtggaaaaggt
gaaacagacagacgcatggttgcagccagaacagagcctctaactccaaacccagcttct
aagaagcagcgagtccacaaaagaggatcagagtctagttctgattctgactctgattct
gagagatcgtcctgttcttccagatcatcttcttcctcgtcttcctcttcttcttgctcc
cactctcgatcaggctctagctcttcttcttcctcctcttgttcttcagcatcatcttca
tcctcatcctcgtcctcctcttcctcatcatcctcctcatcttcatcagaagaaagtgac
agtgaagaagaggaagtccaaaagcgagcagaaggtacccctcacgtgaaagcctacgat
gaagaaagcgtcgcatcactgagcactacccaggatgagacccaggatagtttccagatg
aacaacgggaccccggagtctgcttacatcctacaaggtggatacatgctggcagcttcg
tactggccaaaggatcgtgtgatgatcaaccggttggacagtatttgtcaaacagttctg
aaagggaagtggccttcagctagaagaagttatgatgccaatgcagtggcttctttctat
accacaaagctgctggacagctctggcgcagctacagaacatagcgagcccagcgtgccc
actcctgcaggtgctggcgttaaagaagaacacgatcagtcaacacagatgtcaaaggtg
aagaagcatgtacgagaaaaggagtttacagtgaaaatcaaagacgaaggtggtttgaag
ttgacatttcagaagcaagggcttgctcagagaaggccgttggacagtgaagatggtgct
ctagggcagcagcagtacctcactcgacttcgggaccttcaaggtgcgtcagagaccagc
ctcgccagttttccaaaatccatgccaggatcaggtactcccattcaatcaacccttggt
gccaatggagttttattagacaaccagcctgtagtcaaaaaaaggcggggaaggaggaag
aatgtagaaggtgttgacatcctctttttcaacagaaataaaccacctaatcatgttact
ttaggcttaaccacctcacagatttctacagggataaatccagcactatcctatactcaa
cctcaaggaattcctgatacagaaagtcccgttccagttattaatcttaaagatgggaca
agacttgcaggcgatgatgcaccgaagagaaaggatttggaaaaatggcttaaggagcac
ccaggttatgtggaagatttaggagcttttattcctagaatgcagctccacgaggggaga
cccaagcaaaaaaggcatcgttgcagaaaccccaataaactagatgtgaatagtctcact
ggggaagaacgtgttcagctgattaacagaagaaatgccagaaaggttggaggtgccttt
gctccccctctgaaagatttatgtcggttcctgaaagaaaatacagaatatggagtagct
cctgaatggggagatgttgttaagcagtctggatttcttccagaaagtatgtatgaacgt
attctcactggtcccgttgtgagagaggaagtaagcaggcgagggagacggcctaaaagt
ggaattgcaaaggccactgcggcagcagcagctgccactgccaccagtatttcaggcaat
cctttattagccaatggattacttccaggtgtggacctcacaacccttcaggccttacaa
caaaacctacaaaacttgcagtcactgcaagtaaccgcagggctgatgggaatgcctgct
ggcctttcttctggaggagaagctaaaaacgtggctgccatgttccccatgctgctgtca
ggaatgactggattgccaaatctgttgggcatgggaggactcctgacaaagcctacagaa
tctggaacagaagaaaaaaagggaaatgactctaaggagctagaaggaaaaaaagaaagg
acagagagccaaaattcagagaatagtggtgaaaactctgtgtcaagttctccttcaaca
tcctctactgctgcattaagtacagctgcagctgccaacccgttagctcttaacccacta
ttactatctaatatactttatccagggatgcttctcactccaggccttaatcttcatatt
ccaactttgtcccagtccaatacttttgatgtacagaaaaataaaaacagtgacttaggc
tcgtctaagtctgtagaagtaaaggaagaagattccagagttagagatcaggaagacaaa
gggggaactgaaccgagtcctctcaatgaaaacagcacagatgagggttcagagaaagcc
gatgcttcatctggatctgatagtacaccatcgtcatccgaggattcagattctagtaat
gaagactga
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integrated database retrieval system
