Balaenoptera musculus (blue whale): 118885664
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Entry
118885664 CDS
T09887
Symbol
EDC4
Name
(RefSeq) enhancer of mRNA-decapping protein 4 isoform X1
KO
K12616
enhancer of mRNA-decapping protein 4
Organism
bmus
Balaenoptera musculus (blue whale)
Pathway
bmus03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bmus00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
118885664 (EDC4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bmus03019
]
118885664 (EDC4)
Messenger RNA biogenesis [BR:
bmus03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
118885664 (EDC4)
mRNA degradation factors
5'-3' decay
Decapping complex
118885664 (EDC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ge1_WD40
EDC4_C
WD40
WD40_WDHD1_1st
Beta-prop_EDC4L
WD40_CDC20-Fz
DUF445
WD40_Prp19
Beta-prop_TEP1_2nd
Beta-prop_HPS5
WDR55
Motif
Other DBs
NCBI-GeneID:
118885664
NCBI-ProteinID:
XP_036690411
UniProt:
A0A8B8W037
LinkDB
All DBs
Position
19:41895833..41907067
Genome browser
AA seq
1400 aa
AA seq
DB search
MASSCASIDIEDATQHLRDILKLDRPAGGPSAESQRPSNAYNGDLNGLLVPDPLCSGDGT
STNKPGLRAMPPINLQEKQVICLLGDDSSTCIGILAKEVEIVASSDSSISSKARGSNKVK
IQPVAKYDWEQKYYYGNLIAVSNSFLAYAIRAANNGSAMVRVISVSTSERTLLKGFTGSV
ADLAFAHLNSPQLACLDEAGNLFVWRLALVNGKIQEEILVHIRQPEGTPLNHFRRIIWCP
FIPEESEDCCEEGSPTVALLHEDRAEVWDLDMLRSNHSTWPVDVSQIKQGFIVVKGHSTR
LSEGALSPDGTVLATASHDGFVKFWQIYIEGQDEPRCLHEWKPHDGRPLSCLLFCDNHKK
QDPEVPFWRFLITGADQNRELKMWCTVSWTCLQTIRFSPDIFSSVSVPPSLKVCLDLSAE
YLILSDVQRKVLYVMELLQNQEEGRACFSSISEFLLTHPVLSFGIQVVSRCRLRHTEVLP
AEEENDSLGADGTHGVGAMESAAGVLIKLFCVHTKALQDVQIRFQPQLNPDVVAPLPTHP
AHEDFAFPTAFGESRPELASEGLGSATHGSQPDLRRIVELPAPADFLSLSSETKPKLMTP
DAFMTPSTSLQQIAASPSSSSSSSSSSSLTAVSAMSSTSAVDPSLPRPPEELTLSPKLQL
DGGLTMSSSSSLQASPRSLLPGLLPSPADKLPPKGPGQVPTAASTLSLELQEVEPLGLPQ
ASPSRTRSPDVISSASTALSQDIPEIASEALSRGFGSSAPEGLEPDSMASAASALHLLSP
RPRPGPELGPQLSLDGGPGDGDRHSTPSLLEAALTQEATAPDSQVWPTAPDITRETCSSL
AESPRNGLQEKHKSLAFHRPPYHLLQQHDSQDASAEQSDHDDEVASLASAAGGFGTRVPT
PRLPAKDWKTKGSPRASPKLKRKGKKDDGNSSVGSRLTEHQVAEAPEDWPALIWQQQREL
AQLRHSQEELLQRLCTQLEGLQSTVTGHVERALESRHEQEQRRLERALAEGQQRGGQLQE
QLTQQLSQALSSAVAGRLERSIRDEIKKTVPPCVSRSLEPVAGQLSNSVATKLTAVEGSM
KENISKLLKSKNLTDAIARAAADTLQGPMQAAYREAFQSVVLPAFEKSCQAMFQQINDSF
RLGTQEYLQQLESHMKSRKAREQEAREPVLAQLRGLVSTLQGATEQMAATVSSSVRAEVQ
HQLHVAVGSLQEAILAQVQRIVKGEVSVALKEQQAAVTSSIMQAMRSAAGTPVPATHLDC
QAQQAHILQLLQQGHLNQAFQQALTAADLNLVLYVCETVDPGQVFGQPPCPLSQPVLLSL
IQQLASDLGTRTDLKLSYLEEAVMHLDHSDPITRDHMGSVMAQVRQKLFQFLQAEPHNSL
GKAARRLSLMLHGLMTPSLP
NT seq
4203 nt
NT seq
+upstream
nt +downstream
nt
atggcctcctcctgcgcgagcatcgacatcgaggacgccacgcagcacctgcgggacatc
ctcaagctggaccggcccgcggggggtcccagtgcagagagccagcgaccatctaatgcc
tacaatggagatctcaatgggctcctggtcccagaccccctctgctcaggtgatggtact
tcaacaaacaagcctggtctccgagccatgccacctattaacctgcaggaaaagcaggtc
atctgcctcttaggagacgacagttccacctgcatcgggattttggccaaggaggtggag
attgtggccagcagtgactctagcatctcgagcaaggcacgggggagcaacaaggtgaaa
atccagcccgtcgccaagtatgactgggagcagaaatactactatggcaacctgattgct
gtgtccaactctttcttggcctatgctattcgggctgccaacaacggctcagcgatggta
cgggtgatcagtgtcagcacttcagagaggaccctgctcaaaggcttcacaggcagcgtg
gctgatctggcctttgcacacctcaattccccacagctggcctgcctggatgaggcaggc
aacctgtttgtgtggcgcttggccctggttaatggcaaaattcaagaagagatcttggtc
catatccgacagccagagggcactccactgaaccacttccgcaggatcatctggtgcccc
ttcatccccgaagagagtgaggactgctgtgaggagggcagcccaacggtggccctgttg
catgaggaccgggctgaggtatgggacctggacatgctccgctccaaccacagcacctgg
cccgtggatgtcagccagatcaagcagggcttcatcgtggtaaaaggccacagcacacgc
ctaagtgaaggggccctctcacctgatgggactgtcctggctaccgcaagtcatgacggc
ttcgtcaagttctggcagatttacattgaggggcaggatgagcccaggtgtttgcacgag
tggaagcctcacgatgggaggcccctctcctgcctcctgttctgtgacaaccacaagaaa
caggatcctgaggtccctttctggaggttcctcattactggcgctgaccagaatcgggag
ctgaagatgtggtgcacggtgtcctggacctgcctgcagaccattcgcttctccccagat
atcttcagctcagtgagtgtgccccccagcctcaaggtttgcctggacctctcagcagaa
tacctgattctcagcgatgtgcaacggaaggtcctctacgtgatggaactgctgcagaac
caggaggagggccgtgcctgcttcagctccatctctgagttcctgctcacccaccctgtg
ctgagcttcggtatccaggttgtgagtcgctgccggctgcggcacactgaggtgctgcca
gccgaggaggagaatgacagcctaggggctgatgggacccacggagttggtgccatggag
tctgcagccggtgtgctcatcaagctcttttgtgtgcacactaaggcattgcaagatgta
cagatccgtttccaaccacagctgaaccctgacgtggtggccccgctccccacacaccct
gcccatgaggactttgcttttcccacagcatttggagagtctcgaccagaactggcttct
gagggcctgggatcggccactcacggctcccagcctgacctccgacgcatcgtggagctg
cctgcacctgccgacttcctcagtctgagcagtgagaccaagcccaagctgatgacacct
gatgccttcatgacacctagtacctccctgcagcagatcgctgcatctcccagtagcagc
agcagcagcagcagcagttcctctcttacagcggtgtctgccatgagcagtacttcggcc
gtggacccctctttgcccaggccacctgaggagctgaccttgagccccaagctacagctg
gatggcggtctgacaatgagcagcagcagcagcctgcaggcaagcccgcgtagcctcctg
cctggcctgctcccaagtccggccgacaaattgcctcccaaagggcccgggcaggtgcct
actgctgcctctacactatccctggagctgcaggaagtggagcccctggggctaccccag
gcttcccccagccgcacccgctcccccgatgttatctcctcagcttccactgccctgtcc
caggatatccctgagatcgcatctgaggcactgtcccgtggctttggctcctctgctcct
gagggcctagagccggacagtatggcctcagctgcttcagcactacacctgctgtctcca
cggccccggccgggacccgagcttggcccccagcttagcctggatggaggccctggggat
ggggatcggcatagtaccccttccctcctggaggcagccttgacccaggaggccacggcc
cctgacagtcaggtctggcctacggcaccagacattactcgtgagacctgcagcagcctg
gcagagagcccccggaatggcctccaggaaaagcacaagagcctggcctttcaccgacca
ccttatcacctgctgcagcaacacgacagtcaggacgccagtgccgagcaaagtgaccac
gatgacgaggtggccagcctggcctctgctgcagggggctttggcaccagagttcccact
ccacgtcttcctgccaaggactggaagaccaaaggatcccctcgggcctcacccaagctc
aagcgaaagggcaaaaaggatgacgggaattcatccgtgggatcccggctcacagagcac
caggtggcagaggcccctgaggactggccagcactaatttggcaacagcagagagagctg
gcgcagcttcggcacagccaagaagagctgctacagcgtctgtgcacccaacttgaaggc
ctgcagagcactgtcacgggccacgtagaacgtgccctagagtcacggcacgagcaggag
cagcggcgactggagcgggcactggccgagggacagcagcgtggtgggcagctgcaggag
cagctgacgcaacagctgtcccaagcactatcttcagctgtggctgggcggctggagcgc
agcatacgggatgagatcaagaagacggttcctccatgtgtgtctaggagtctggagccc
gtggcaggccaactgagcaactcagtggccaccaaactcacagccgtggagggtagcatg
aaagagaatatctccaagctgctgaagtccaagaacttaacagatgccattgcccgagca
gccgcagacacgttacaggggccaatgcaggccgcctaccgtgaagccttccagagcgtg
gtactgcccgccttcgagaagagctgccaggccatgttccagcagatcaatgatagcttc
cgactgggcacgcaggaatacttgcagcagctggagagccacatgaagagccgaaaggca
cgagaacaggaggcgcgggagcccgtgctggcccagctgcggggcctggtcagcacactg
cagggggccactgagcagatggcggctaccgtgtccagcagcgttcgggctgaggtgcag
caccagctgcacgtggctgtgggcagcctgcaagaggcaattttagcacaggtgcagcgc
attgttaagggtgaggtgagtgtggcactcaaggagcagcaggctgccgtcacctctagc
atcatgcaggccatgcgctcagccgctggcacacctgtccctgccacccacctcgactgc
caagcccagcaagcccatatcctgcagctgctgcagcagggccacctcaatcaggccttc
cagcaggccctgacagctgccgacctgaacctggtgctgtacgtgtgtgaaactgtggac
ccaggccaggtttttgggcagccaccttgccccctctcccagcctgtactcctttcactc
atccagcaactggcctctgaccttggcactcgaactgacctcaagctcagctacctggaa
gaggctgtgatgcacctggaccacagtgaccccatcactcgggaccacatgggctctgtc
atggcccaggtgcgccagaagctcttccagttcctgcaggcggagccacacaactcactt
ggcaaagcggcccggcgtctcagcctcatgctgcacggccttatgacccccagcctccct
tag
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integrated database retrieval system
