Balaenoptera musculus (blue whale): 118886180
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Entry
118886180 CDS
T09887
Symbol
LIG3
Name
(RefSeq) DNA ligase 3 isoform X1
KO
K10776
DNA ligase 3 [EC:
6.5.1.1
]
Organism
bmus
Balaenoptera musculus (blue whale)
Pathway
bmus03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bmus00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
118886180 (LIG3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bmus03400
]
118886180 (LIG3)
Enzymes [BR:
bmus01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
118886180 (LIG3)
DNA repair and recombination proteins [BR:
bmus03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Short Patch-BER factors
118886180 (LIG3)
BRITE hierarchy
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
LIG3_BRCT
zf-PARP
DNA_ligase_A_C
BRCT_2
RNA_ligase
mRNA_cap_enzyme
Motif
Other DBs
NCBI-GeneID:
118886180
NCBI-ProteinID:
XP_036691382
EnsemblRapid:
ENSBMSG00010014942
UniProt:
A0A8B8W2S8
LinkDB
All DBs
Position
20:complement(39354823..39376287)
Genome browser
AA seq
1034 aa
AA seq
DB search
MLNVHLFVYIFRAYPPRPPWTYFNVPSHPVSCMTLAFKILLPPTLRALSQKELCLFREQH
HWPDIRQFSRWSETVLRGHRLLQRRKPVVSFQESNLRPRATRLVFLPGSHVGLCSGPCEM
AEQRFCVDYAKRGTAGCKKCKEKIVKGVCRIGKVVPNPFSESGGDMKEWYHIKCMFEKLE
RARATTKKIEDLTELEGWEELEDNEKEQISQHIADLSSKAANTPKKKAVVQAKLTATGQV
TSPVKGASFVTNTNPRKFSGFSAKPNNSGEAHSNPTPKTSLSSSKCDPKHKDCLLREFRK
LCAMVAENPSYNTKTQIIQDFLQKGSAGDGFHGDVYLTVKLLLPGVIKSVYNLNDKQIVK
LFSRIFNCNSDDMARDLEQGDVSETIRVFFEQSKSFPPAAKSLLTIQEVDEFLLRLSKLT
KEDEQQQALQDIASRCTANDLKCIIRLIKHDLKMNSGAKHVLDALDPNAYEAFKASRNLH
DVVERVLRNEQEVKKEPGRKRALSVQASLMTPVQPMLAEACKSIEYAMKKCPNGMFSEIK
YDGERVQVHKNGDHFSYFSRSLKPVLPHKVAHFKDYIPQAFPGGHSMILDSEVLLIDNKK
GKPLPFGTLGVHKKAAFQDANVCLFVFDCIYFNDVSLMDRPLFERRKFLHDNMVEIPNRI
LFSEMKQVAKASDLADMINRVIQEGLEGLVLKDVKGTYEPGKRHWLKVKKDYLNEGAMAD
TADLVVLGAFYGQGSKGGMMSIFLMGCYDPSSQKWCTVTKCAGGHDDATLARLQKELDMV
KISKDPSKIPSWLKINKIYYPDFIVPDPKKAAVWEITGAEFSKSEAHTADGISIRFPRCT
RIRDDKDWKSATNLPQLKELYQLSKERAAFAIVAGDEGSSTTGGSSGENEGTSGPAVSHE
APRNSPKQPSASAKKAGGKLSSSNSKGGNRLAAKPSPVKVGEKRKVPDETPCRAKVTVLP
DIFTGVRLYLPPSTPDFSRLRRYFVAFDGDLAQEFDVASATHVLGSRDKNPEAQQVSPEW
IWACIRKRRLVAPC
NT seq
3105 nt
NT seq
+upstream
nt +downstream
nt
atgctgaatgtgcacctttttgtatacattttcagagcctaccccccccgccccccatgg
acttattttaatgttcccagccatcccgtgagctgtatgactttggcttttaagatcctc
ttaccaccaactctccgtgcgctcagccaaaaagaactgtgcctattccgagaacaacat
cactggcctgacataagacagttcagccggtggtcagaaacagttcttcgtggacaccgc
ctcctccagagaagaaagcctgttgtgtcattccaggaaagcaatctaagaccacgtgcc
acccgccttgttttcttgccagggtcgcatgtgggactctgcagtggcccctgtgagatg
gcagagcaacggttctgtgtggactatgccaagcgtggcacagccggctgcaaaaaatgc
aaggaaaagattgtaaagggcgtgtgccgaatcggcaaggtggtgcccaatcccttttca
gagtcagggggtgatatgaaagagtggtaccacattaaatgcatgtttgagaaactggag
cgggcccgggccaccacaaaaaaaattgaggacctcacagagctggaaggctgggaagag
ctggaagataatgagaaagaacagataagccagcacattgcagatctgtcttccaaggca
gcaaacacaccaaagaagaaagctgttgtccaggctaagttgacagccactggccaggtg
acatctccagtgaaaggtgcctcatttgtcaccaataccaatccccggaaattttctggc
ttttcagcgaagcccaacaactctggggaagcccactcaaaccctacccctaagacaagt
ctgtcctcaagcaaatgtgaccctaagcacaaggattgtctgctacgcgagtttcggaag
ttgtgtgccatggtggctgaaaatcctagctacaacacgaagacccagatcatccaggac
ttccttcagaaaggctcagcaggagatggtttccacggtgacgtgtacctaacagtgaag
ctgctgctgccgggtgttattaagagtgtttacaacttgaatgataagcagattgtgaag
cttttcagccgcatttttaactgcaactcagatgatatggcacgagacctagagcagggt
gacgtgtcagagacaatcagagtcttctttgagcagagcaagtctttccccccagctgcc
aagagccttcttaccatccaggaggtggatgaattcctcctgcggctctccaagctcacc
aaggaggacgagcagcaacaggccctgcaggacatcgcctccaggtgtacagccaatgac
cttaagtgcatcatcaggttgatcaaacatgatctgaagatgaactcaggtgcaaaacat
gtgttagatgccctagaccccaatgcctatgaagccttcaaagcctcacgcaacctgcac
gatgtggtggagcgggtcctccgcaacgagcaggaggtgaagaaggagccaggccggaaa
cgagctctgagtgtccaggcctcactgatgaccccggtgcaacccatgctggccgaggcc
tgcaagtccatcgagtacgcgatgaagaagtgtccgaatggcatgttctctgagatcaag
tatgatggggagcgagtccaggtacataagaacggggaccacttcagctacttcagccgc
agtctcaagccagtcctgccgcacaaggtggcccactttaaggactacatcccccaggct
ttccctgggggccacagcatgatcttggactctgaggtgctcctgatcgacaacaagaaa
ggcaaaccactgccctttgggactctgggagtgcacaagaaagctgccttccaggatgct
aatgtctgcctgtttgtttttgattgtatctacttcaatgatgtcagcttgatggatagg
cctctgtttgagcggcggaagtttcttcatgataacatggttgaaattcccaaccggatc
ctgttctcagaaatgaagcaagtcgcaaaagcttctgacttggctgacatgatcaaccgg
gtgatccaagaggggttggaagggctggtgctgaaggacgtgaagggtacatatgagcct
ggaaagcgtcattggctgaaagtgaagaaggactatttgaacgagggggccatggctgac
acagctgacctggtggtgcttggggccttctatgggcaagggagcaaaggtggcatgatg
tccatcttcctcatgggctgctatgacccgagcagccagaagtggtgcacagtcaccaag
tgtgcaggaggccacgacgacgcgacgctcgcccgcctacagaaggaactggacatggtg
aagatcagcaaggatcccagcaagatacccagctggctgaaaatcaataagatctactat
cctgacttcatcgttccagacccaaagaaagctgccgtgtgggagatcacaggggctgaa
ttctcgaaatctgaggctcacacagccgatgggatctccatccgtttccctcgctgcacc
cgaatccgtgatgataaggactggaagtctgccactaacctcccccaactcaaggaactg
taccagctctccaaggagcgggcggctttcgccatagtggccggagatgaggggagctcc
actacagggggcagcagcggagagaacgagggcacgtcggggccagctgtgtctcacgag
gccccgagaaactcccccaagcagccctccgccagtgccaagaaggcaggagggaagctg
agtagctccaacagcaaaggcggcaacaggctggctgcaaagccttcccctgtgaaagtg
ggagagaagcggaaggtccctgatgagaccccgtgccgagcaaaggtgacggtgctgccg
gacatcttcaccggggtgcggctctacctgcccccctccacaccagacttcagccgtctc
cgacgctactttgtggcattcgatggggacctggcgcaggaatttgacgtggcctcagcc
acacatgtgctgggtagcagggacaagaaccctgaggcccagcaggtctccccggagtgg
atctgggcctgtatccggaaacggagactggtagctccctgctag
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