Balaenoptera musculus (blue whale): 118886573
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Entry
118886573 CDS
T09887
Symbol
TOP3A
Name
(RefSeq) DNA topoisomerase 3-alpha isoform X1
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
bmus
Balaenoptera musculus (blue whale)
Pathway
bmus03440
Homologous recombination
bmus03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
bmus00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
118886573 (TOP3A)
03460 Fanconi anemia pathway
118886573 (TOP3A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bmus03032
]
118886573 (TOP3A)
03400 DNA repair and recombination proteins [BR:
bmus03400
]
118886573 (TOP3A)
Enzymes [BR:
bmus01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
118886573 (TOP3A)
DNA replication proteins [BR:
bmus03032
]
Eukaryotic type
DNA Topoisomerases
118886573 (TOP3A)
DNA repair and recombination proteins [BR:
bmus03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
118886573 (TOP3A)
FA (Fanconi anemia) pathway
118886573 (TOP3A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_GRF
Toprim
Zn_ribbon_Top1
zf-C2H2_10
Zn_ribbon_GRF_2
Zn_ribbon_recom
Motif
Other DBs
NCBI-GeneID:
118886573
NCBI-ProteinID:
XP_036692429
UniProt:
A0A8C0DQQ9
LinkDB
All DBs
Position
20:58450069..58475661
Genome browser
AA seq
996 aa
AA seq
DB search
MIFAAVRCALRWLPRPGSRALTLADMEVAMRGVRKILCVAEKNDAAKGIADLLSGGRMRR
REGLSRFNKIYEFDYRLHGQNVTMIMTSVSGHLLAHDFQMQFRKWQSCNPLVLFEAEIEK
YCPENFLDIKKTLEREARQCQVLVIWTDCDREGENIGFEIIHVCKAVKPSLQVLRARFSE
ITARAVQAACENLMEPDRRVSDAVDVRQELDLRIGAAFTRFQTLRLQKIFPEVLAEQLIS
YGSCQFPTLGFVVERFKAIQAFVPETFHKIRVTHDHRDGAVEFSWKRHRLFNHTACLVLY
QLCMEDPRATVVEVRSKAKSKWRPQALDTVELEKLASRKLRINAKETMRIAEKLYTQGYI
SYPRTETNIFPKDLDLTALVEEQTSDPRWGPFAQSILERGGPTPRNGNKSDQAHPPIHPT
KYTDSLQGDEQRLYELIVRHFLACCSQDAQGQETTVEIDIAQERFVAHGLMILARNYLDV
YPYDRWSDKTLPVYSRGSCFQPSTVEMVDGETSPPQLLTEADLIALMEKHGIGTDATHAE
HIETIKSRMYVGLTPDKRFLPGHLGMGLVEGYDSMGYEMSKPDLRAELEADLKLICEGKK
DKLVVLQQQVQKYKQVFIEAMAKAQRLDEALSQYFGAGAELAQQEAIFPAVPEPVRKCPQ
CGKDMVLKTRKSGGFYLSCTGFPQCRSAVWFPDSVLEASRDGSVCPVCQPHPVYRLKFKF
KRGSLPPTMPLEFVGCVGGCDETLREILDLRFSQGPTRAGQPVSQPSGHLQASQALNRMG
SGQHGHPQPPATRPSKALARTLPLPAAEGESNSVTCNCGREAVLLTVRKEGPNQGRQFYR
CSGGGCSFFLWADGGHPEAGGRPSEVPRPPGGSGKPLGGPRSPGDGGGGARCLCSQPAVT
RTVQRDGPNKGRQFHTCAKPREQQCGFFQWVDENVAPGTFGGPPWAGARGGSQGPEARSK
RARAGSSDAGSAAKKPRKCSLCHQPGHTRPFCPQNR
NT seq
2991 nt
NT seq
+upstream
nt +downstream
nt
atgatcttcgcagccgtccgctgcgcgctccgctggctgccgcggcctgggagtcgggcg
ctgaccctcgccgacatggaggtggccatgcgaggcgtgcggaagatcctctgcgtggcc
gagaagaatgacgcggccaagggcatcgccgacctgctgtccggcggccgcatgcggcgg
agagaaggactttccagattcaacaagatctatgagtttgattatcgtctgcatggccag
aatgtcaccatgataatgacttcagtctcaggacacttgctggctcatgatttccagatg
cagtttcgcaaatggcagagctgcaatcctcttgtcctctttgaagcagaaattgaaaag
tactgcccagagaattttttagacatcaagaaaactctggagcgagaggctcggcagtgc
caggtcctggtgatctggaccgactgcgacagagaaggtgaaaacatcgggtttgagatc
atccacgtgtgcaaggctgtgaagcccagcctgcaggtgctgcgagcccgtttctccgag
atcaccgcccgcgctgtccaggcggcctgtgaaaacctgatggagcccgaccgcagagtg
agcgacgccgtggacgtgaggcaggagctggacctgcggatcggggctgccttcaccagg
ttccagaccctgcggctgcagaagatctttcccgaggtgttggcggagcagctcatcagt
tatggcagctgccagttccccaccctggggttcgtggtggagaggttcaaagccattcag
gcgtttgtgccagaaaccttccacaaaatcagagtgactcatgaccacagggatggcgca
gtggagttcagctggaaaaggcatcggctcttcaaccacacggcttgtcttgtcctctat
cagctgtgcatggaggatcccagggcgaccgtggtggaggtcaggtccaaggcaaaaagc
aagtggaggcctcaagctttggacactgtggaacttgagaagctggcttctcggaagttg
aggataaatgctaaagaaaccatgaggattgctgaaaagctctacactcaagggtacatc
agctatccccgaactgaaacaaacattttccccaaagacttagacctgacagcgctggtg
gaggagcagacctcggacccacgctgggggccctttgcccagagcattctagagcggggc
ggccccactccacgcaacgggaacaagtctgaccaagctcacccccccatccaccccacc
aagtacactgacagcctgcagggggacgagcagcgactgtacgagctcatcgtccgccac
ttcctggcctgctgctcccaggacgcccagggccaggagaccaccgtggagattgacatc
gcgcaggagcgcttcgtggcccacggcctcatgatcctggcccgaaactatctggacgtg
tacccctacgatcgctggagcgacaagaccctccctgtctacagtcgaggctcctgcttt
cagcccagcaccgtggagatggtggacggggagaccagtccgccccagctgctcactgag
gctgaccttattgccctcatggagaagcacggcattggtaccgacgcgacgcacgcggag
catatcgagaccatcaagtcccggatgtacgttgggctcacgccagacaagcgctttctc
cccgggcacctgggcatggggctcgtggaaggctatgactccatgggctacgagatgtcc
aagcctgatctgcgggccgagctggaggccgacctgaagctcatctgcgaggggaagaag
gacaagctcgtggtcctgcagcagcaggtgcagaagtacaagcaggtcttcatcgaagcc
atggccaaagcccagaggttggacgaggccttgtcccagtactttggggcaggggcggag
ctggcccagcaagaagccatcttcccagctgtgccggagcccgtcaggaagtgcccgcag
tgcggcaaggacatggtcctcaagaccaggaagagcggcgggttctacctcagctgcacg
gggttcccgcaatgtcgctcggccgtgtggttcccggacagtgtgctggaggccagcagg
gacgggagcgtgtgtccggtgtgtcagccacaccccgtttacaggttgaagttcaagttt
aagcgaggcagccttcccccaaccatgccactggaatttgtcggctgcgttggcggatgt
gacgagaccctgcgggagatcttggacctcaggttttcacaggggcccacccgagctggc
cagccagtcagccagccctccggccacctgcaggccagccaggccctgaacagaatgggc
agcggccagcacggccaccctcagcctcctgccaccaggccctcgaaggctctggccagg
accctgcccctgcccgccgccgagggcgaaagcaactccgtgacctgcaactgcggccgg
gaggccgtgctgctcaccgtccggaaggaggggcccaaccagggccgccagttctacagg
tgcagcggcggcggctgcagcttcttcctgtgggccgacggcggccacccagaagcaggg
gggcgtccctccgaggtgcccagaccaccaggcggctcagggaagccgctgggcgggccc
agaagccccggcgatggcggcggcggcgcgcgctgcctgtgcagccagcccgcggtcacg
cgcactgtgcagagggacgggcccaacaaggggcgccagttccacacgtgcgccaagccc
cgggagcagcagtgcggcttcttccagtgggtggacgagaacgtggccccagggaccttt
ggaggccccccctgggcaggagccagaggaggaagccaggggccagaggccagaagcaaa
agggcccgggctggttcctcggacgcagggtccgcggccaagaaaccccggaagtgcagc
ctttgccaccagcctggacacacccgtcccttctgtcctcagaacagatga
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