Balaenoptera musculus (blue whale): 118886590
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Entry
118886590 CDS
T09887
Symbol
CDRT1
Name
(RefSeq) CMT1A duplicated region transcript 1 protein isoform X1
KO
K10266
F-box and WD-40 domain protein 10
Organism
bmus
Balaenoptera musculus (blue whale)
Brite
KEGG Orthology (KO) [BR:
bmus00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bmus04121
]
118886590 (CDRT1)
Ubiquitin system [BR:
bmus04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
118886590 (CDRT1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_WDHD1_1st
WD40_Prp19
WD40_CDC20-Fz
EIF3I
WDR55
Beta-prop_TEP1_2nd
Beta-prop_TEP1_C
Beta-prop_SPT8
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_SCAP
Beta-prop_EML_2
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
NBCH_WD40
Beta-prop_DCAF4
Beta-prop_WDR75_1st
Beta-prop_HPS5
Beta-prop_Vps41
F-box-like
F-box
Beta-prop_IP5PC_F
Motif
Other DBs
NCBI-GeneID:
118886590
NCBI-ProteinID:
XP_036692461
UniProt:
A0A8B8W5U4
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All DBs
Position
20:complement(56792965..56829714)
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AA seq
1032 aa
AA seq
DB search
MENMESRLKNAPYFRREKGNNSVPVCRKCEPCVLAWKIFSTKEWFRRVGRMSQRRFLVSM
LQQLDSLYLLHYFQNILQTTQGKDFVYHRSRVNLSKKEGKIVKSSLNQTLDETVEQKMRG
ILHWFGNSSSRTKANYALLLLQMCDPELLLTAADVVRALLLRGRNGASGNDPDSKDVFFF
PEKGHTPPCETSQVCWAARPGHTSFPLSKTTGKANLHENVWCGAATTEGQWKSSLQYISE
MNRLSSEKASVSKAGSAPAADVLVDLEAVRELSSGVSRYRDFIRHLPAHLSKSILSMLDK
NSLNRCVFVSQHWAVLAQQVRTDMSMHSFIQRQITFLQGSYTRGIDPNYANKVTIPVPKM
ADDGKHLRVKNQKWKLRTKNDYDLWTAYQNEETQQVQMEERNVFCGTYNIRILSDMWDRN
RVIHYSGGDLLAMSSNRKIQLLDIIQIKQIPIKFRGHTGSVHTLFLCEEENFLLSGSYDL
SIRYWDLNSGACIRIFSGHQGTITCMDVCKNKLASGAKDCQVKEWDIETGKCLKTFKHKD
PILATRINDTYIVSSCEKGLVKVWHIITAQLVKTLNGHEGAVKCLCFDQWHLLSGSADGL
VMAWSMVGKYERCLMAFKHPKMVINTESNVLMFQFENIKWQYSLEQAKQKKKDKEEDSEE
NGLAEVLSKSSTQIYSPQESTSSKQTAQESLFSKSHRSQVLLRASRLPTGVLTEAPLSQG
KPKSPRRDGRKRPSSREANGMGTEQENLEAKPLAGDKNADDVEKIPKQGQLGTLGDLISC
SKKKSWCIPMSPDQLLLTVNALQKAHNSGEFAYPRRPQTQVIDAWGPSISYPRKVLSLKG
QSVQHAVDRLRLSNPPIDVKQTSIPLEIQKLQPNLKNSVHSPRVQSTIPQPVLICPRFSG
SLKGEDPATSSTDGAVRSFSPLTSTQVIKPNHMLAPPMGTTAQAAKKDRPRFYTALDPFR
VNTEFMLLTVKEEKEYEEAKRKEFQAIKPAAVVDPEKASRAAWIRKIRGLPIDNFTKQGK
TAAPELGQNVFI
NT seq
3099 nt
NT seq
+upstream
nt +downstream
nt
atggaaaacatggaatcgaggctcaagaatgccccttattttcgacgtgagaaggggaac
aattctgtccccgtgtgccggaagtgtgagccgtgtgtcctggcctggaagatcttctcc
accaaagagtggttccgaagggtgggcaggatgtcccagaggaggtttctggtcagcatg
ctgcagcagctggacagcctgtatttgttacactattttcaaaatatccttcagaccacg
caggggaaggattttgtctaccacaggtcccgggtcaacctcagcaagaaggaggggaaa
atcgtcaagtcctccttgaaccaaacgctggacgagacggtggaacagaagatgaggggg
attttgcactggtttggaaacagcagctcccggacgaaggcgaactatgcactcctgctg
ctgcagatgtgcgaccccgagctactgctcactgctgctgatgtcgtcagagccctgctt
ctgagagggcggaacggtgcctcagggaacgacccagactccaaggatgtgtttttcttc
cctgagaaaggccacacgcccccgtgcgagacctcacaagtctgctgggcagccagaccc
gggcacacatccttcccgttgtccaaaactacaggaaaagcaaacttgcacgaaaatgtg
tggtgcggagcagccactactgaaggacagtggaagagttcactccagtatatttccgag
atgaataggctgtcttctgaaaaagcaagcgtgtccaaagcaggctcggcccccgccgcc
gatgtgctggtggatctggaggccgtcagagagctgtcttctggggtcagcagataccgc
gacttcatccgtcacctgcccgcccacctctccaagtctatcctcagtatgctggataag
aacagcctgaacaggtgtgtgttcgtgagccagcactgggcagtgctggcgcagcaggtc
aggaccgacatgtccatgcactctttcatccagcgccagatcaccttcctgcaggggtcc
tacaccaggggaatagaccccaattacgccaacaaggttactatcccagttcctaagatg
gcagatgacgggaagcacctacgcgtgaaaaatcagaaatggaaactgagaacgaagaat
gactacgacctgtggaccgcataccagaacgaggaaactcagcaggtgcagatggaggag
aggaatgtcttctgtggcacttacaacatccgcattctctctgacatgtgggaccgaaac
agagtcatccactattctgggggagatttgttagctatgtcatccaatcggaagatccag
cttctggacatcatacaaataaagcagatacccatcaagttccgaggccacactgggagt
gtccataccctcttcttgtgtgaggaggaaaactttctcctgagtgggagttatgacctg
agtatcagatactgggatctgaacagtggggcttgcatacgcatcttcagtggccaccag
gggactatcacttgcatggacgtgtgtaagaacaagctcgcctctggagcaaaagattgc
caggtaaaagagtgggatatagagacaggaaagtgcctgaagacctttaaacacaaagac
cccatcctggccaccaggatcaatgacacgtacatcgtgagcagctgtgagaaagggctg
gtcaaagtgtggcacatcatcacggcccagctggtgaagacgctcaacggccatgaggga
gctgtgaagtgtctgtgcttcgaccagtggcatctcctgtcgggaagcgctgacggcctg
gtgatggcctggagcatggtgggaaagtacgagcggtgcctcatggccttcaagcatcca
aagatggtgatcaacacggagagcaacgtcctcatgttccagtttgagaatatcaagtgg
cagtactctctggaacaggccaagcaaaagaagaaggacaaagaggaggacagcgaagaa
aacggcctcgcagaagttctctccaagtcaagcactcagatttacagccctcaggaatcc
acatctagcaaacagacagcccaggagtccctgttcagcaaatctcacaggtcccaagtt
ctcctaagggcatccaggttacctacaggagtgttaacggaggcacctctaagtcaagga
aagccaaagtcaccccgaagagatggcaggaagagaccgagttctagggaagcaaatggc
atgggcaccgagcaagagaatttggaagcaaaacccctcgccggagataagaacgcagat
gatgtggagaaaataccaaaacaaggacaactgggaactttgggagacttgatcagttgc
tcaaagaagaagtcctggtgcatccctatgtcacctgaccagctcctcctgactgtgaat
gccctgcagaaagcccataattctggggagtttgcctatccccggaggccccaaacccag
gtcatcgatgcctggggaccttccatttcatacccaaggaaggtcctgagtttgaaggga
cagtcggtccaacatgcagtagatcggctgagattgagcaaccctcccatagatgtgaaa
caaaccagtattccccttgaaatccagaagcttcagcctaacctgaagaactccgtgcac
agccccagagtccagtctaccatcccccagccggtgctcatctgccccaggttctctggc
agcttaaagggtgaagacccggcaaccagttcaactgatggggcagtgcgcagcttcagc
cccttaaccagcacacaggtcatcaaaccaaaccacatgctggctccgccgatgggcacg
acggcccaggctgccaagaaagatcggccccgcttctacacggccctcgaccccttcaga
gtgaacacggagttcatgctgctgactgtgaaggaggagaaagagtacgaggaggccaag
aggaaggagtttcaggccataaagccggctgcagtggttgatccagaaaaagccagcaga
gctgcatggatcaggaagatcagaggcctgcccatagataatttcacgaagcaaggaaaa
acagcagcccctgaacttggacaaaacgtatttatctga
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