Balaenoptera musculus (blue whale): 118886747
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Entry
118886747 CDS
T09887
Symbol
CASC3
Name
(RefSeq) protein CASC3 isoform X1
KO
K14323
protein CASC3
Organism
bmus
Balaenoptera musculus (blue whale)
Pathway
bmus03013
Nucleocytoplasmic transport
bmus03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
bmus00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
118886747 (CASC3)
03015 mRNA surveillance pathway
118886747 (CASC3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bmus03019
]
118886747 (CASC3)
Messenger RNA biogenesis [BR:
bmus03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
118886747 (CASC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Btz
Motif
Other DBs
NCBI-GeneID:
118886747
NCBI-ProteinID:
XP_036692799
UniProt:
A0A8B8W6S0
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All DBs
Position
20:19416062..19436205
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AA seq
703 aa
AA seq
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MADRRRQRASQDTEDEESGASGSDSGGSPARGGGSCSGSAGGGGSGSVLSQRGGRAGALH
LRRVESGGAKSAEESECESEDGIEGDAVLSDYESAEDSEGDEGEYSEEENSKVELKSEAN
DAANSSAKDEKGEEKPDTKGTVTGERQSGDGQESTEPVENKVGKKGPKHLDDDEDRKNPA
YIPRKGLFFEHDLRGQTQEEEVRPKGRQRKLWKDEGRWEHDKFREDEQAPKSRQELIALY
GYDIRSAHNPDDIKPRRIRKPRFGSPPQRDPNWIGERPNKSHRHQGPGGTLPPRTFINRN
AAGTGRMSAARNYSRSGGFKEGCAGFRPVEAGGQHAGRSGETVKHETSYRSRRLEQTPVR
DPSPEADAQVLGSPEKEEAASEIPNPAPDTAPPAPDRPIEKKSYSRARRTRVKAGDAVKV
AEEVPPPPEGLTPAPPVPETTPPPPAKTGNWEAPVDSTTGGLEQDVAQLNITEQNWSPGQ
PSFLQSRELRGMPNHIHMGAGPPPQFNRMEEMGVQGGRAKRYSSQRQRPVPEPPAPPVHI
SIMEGHYYDPLQFQGPIYTHGDSPAPLPPQGMIVQPEMHLPHPGLHPHQTPAPLPNPGLY
PPPVSMSPGQPPPQQLLAPTYFSAPGVMNFGNPSYPYAPGALPPPPPPHLYPNTQAPSQV
YGGVTYYNPAQQQVQPKPSPPRRTPQPVTIKPPPPEVVSRGSS
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
atggcggatcggcggcggcagcgcgcttcgcaggacaccgaggacgaagaatctggtgct
tccggctcagacagcggcggttccccggcgcggggcggcgggagctgcagcggtagcgct
ggaggcggcggcagtggctctgtgctttcccagcgcggaggccgagccggggcccttcat
ctgcggcgggtggagagcgggggcgccaagagcgctgaggagtcggagtgtgagagtgaa
gatggcatcgagggcgatgctgttctctcggattatgaaagtgcagaagactcagaaggt
gatgaaggggagtacagtgaagaggaaaactccaaagtggagctgaaatcagaagccaat
gatgctgctaattcttcagcaaaagacgagaagggagaagaaaagcctgacaccaaaggc
actgtgactggagagaggcaaagtggggatggacaggagagcacagagcctgtggagaac
aaagttggtaaaaaaggccctaagcatttggatgatgatgaagatcggaagaacccagca
tacataccccggaaagggctcttttttgagcatgatcttcgagggcagactcaggaggag
gaagtcagacccaagggacgtcagcgaaagctgtggaaggatgagggtcgctgggagcat
gacaagtttcgggaagatgaacaggctccgaagtcccgacaggagctcattgctctttat
ggctatgacatccgctcagctcacaatcctgatgacatcaaaccccgaagaatccggaaa
cccaggtttgggagtcctccacaaagagatccaaactggattggtgagcggccaaataag
tcccatcgccaccagggtcctgggggcaccttaccaccaaggacatttatcaacaggaat
gctgcaggtactggccgcatgtctgctgccaggaattactctcgatctggaggcttcaag
gaaggttgtgctggttttaggcctgtggaagctggtgggcagcatgctggccggtctggt
gagactgttaaacatgagactagttaccggtcacggcgcctggagcagactccagtaagg
gatccatctccagaagcagatgctcaagtgcttggcagtcctgagaaggaggaggcggcc
tcagagataccaaatcctgctcctgacactgcaccaccagctcctgacaggcctattgag
aagaaatcctattcccgggcaagaagaaccagggtcaaagctggagatgcagtcaaggtt
gcagaggaggtgccccctccacctgaagggctgaccccagcacctccagtcccagaaact
acgcctcctccgcctgctaagactgggaactgggaggctccagtggattctactacaggt
ggacttgaacaagatgtggcacaactaaatataacagaacagaattggagcccagggcag
ccttcattcctgcaatcacgtgagcttcggggtatgcccaaccacatacacatgggagca
ggacctccacctcagtttaaccggatggaagaaatgggtgtccagggtgggcgagccaaa
cgctattcatctcaacggcaaagacctgtgccggagccccctgcccctcctgtgcacatc
agtatcatggagggacattactatgatccattgcagttccagggaccaatctatacccat
ggtgacagccctgccccactgcctcctcagggcatgattgtgcagccagaaatgcacctt
ccccacccaggtttacatccccaccagacaccggcgcctctgcccaatccaggcctctat
cccccaccagtgtccatgtctccaggacagccaccgcctcagcagttgcttgctcctacc
tacttttctgctccaggcgtcatgaactttggtaatcccagttacccttatgcgccaggg
gcactgcctccccccccaccgcctcatctatatcctaacacgcaggccccatcgcaggta
tatggaggggtgacctactataaccccgcccagcagcaggtgcagccaaagccctcccca
ccccggaggactccccagccagtcaccatcaagcccccaccacctgaggttgtaagcagg
ggttccagttaa
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