Balaenoptera musculus (blue whale): 118887072
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Entry
118887072 CDS
T09887
Symbol
ALYREF
Name
(RefSeq) THO complex subunit 4
KO
K12881
THO complex subunit 4
Organism
bmus
Balaenoptera musculus (blue whale)
Pathway
bmus03013
Nucleocytoplasmic transport
bmus03015
mRNA surveillance pathway
bmus03040
Spliceosome
bmus05014
Amyotrophic lateral sclerosis
bmus05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
bmus00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
118887072 (ALYREF)
09122 Translation
03013 Nucleocytoplasmic transport
118887072 (ALYREF)
03015 mRNA surveillance pathway
118887072 (ALYREF)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
118887072 (ALYREF)
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
118887072 (ALYREF)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bmus03019
]
118887072 (ALYREF)
03041 Spliceosome [BR:
bmus03041
]
118887072 (ALYREF)
Messenger RNA biogenesis [BR:
bmus03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
118887072 (ALYREF)
TREX complex
118887072 (ALYREF)
Spliceosome [BR:
bmus03041
]
Complex C
Other components
EJC/TREX
118887072 (ALYREF)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
118887072 (ALYREF)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
FoP_duplication
F07F6_N
Motif
Other DBs
NCBI-GeneID:
118887072
NCBI-ProteinID:
XP_036693514
UniProt:
A0A8B8W8S0
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All DBs
Position
20
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AA seq
257 aa
AA seq
DB search
MADKMDMSLDDIIKLNRSQRGGRGGGRGRGRAGSQGGRGGGAQAAARVNRGGGPIRNRPA
IARGAAGGGGRNRPAPYSRPKQLPDKWQHDLFDSGFGGGAGVETGGKLLVSNLDFGVSDA
DIQELFAEFGTLKKAAVHYDRSGRSLGTADVHFERKADALKAMKQYNGVPLDGRPMNIQL
VTSQIDTQRRPAQSVNRGGMTRNRGSGGFGGGGGTRRGTRGGSRGRGRGTGRSSKQQLSA
EELDAQLDAYNARMDTS
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
atggccgacaaaatggatatgtctctggacgacatcattaaactgaaccggagccagcga
ggcggccgcggcgggggcaggggccgcggccgggccggctcccagggcggccgcggaggc
ggggcgcaggccgccgctcgagtgaaccgaggcggcggacccattcggaaccggccggcc
atcgcccgcggcgcggcgggcggcggcggcagaaaccggccggcgccctacagcaggccg
aaacaacttcctgacaaatggcaacatgaccttttcgatagcggttttgggggtggtgcc
ggcgtggaaaccggtgggaaactgctggtgtcaaatctggattttggagtgtctgacgct
gatattcaggaactctttgctgaatttggaactctgaagaaggcggctgtgcactacgac
cgatccggccgcagtttaggaacagctgatgtgcactttgagcggaaggcagatgcacta
aaagctatgaaacagtacaacggtgtccctttggatggccgccccatgaacattcagctc
gtcacctcacagattgacacacagcggagacctgcacagagcgtaaacagaggcgggatg
actagaaaccgtggttcgggaggttttggtggtggcggtggcacccggagaggcacccgt
ggaggcagccggggcagaggcagaggaaccggcaggagttcaaagcagcagctttctgca
gaggaattggacgcccagctggatgcttataatgcaagaatggacaccagttaa
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