Balaenoptera musculus (blue whale): 118887129
Help
Entry
118887129 CDS
T09887
Symbol
SLC6A4
Name
(RefSeq) sodium-dependent serotonin transporter isoform X1
KO
K05037
solute carrier family 6 (neurotransmitter transporter, serotonin) member 4
Organism
bmus
Balaenoptera musculus (blue whale)
Pathway
bmus04082
Neuroactive ligand signaling
bmus04721
Synaptic vesicle cycle
bmus04726
Serotonergic synapse
Brite
KEGG Orthology (KO) [BR:
bmus00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
118887129 (SLC6A4)
09150 Organismal Systems
09156 Nervous system
04726 Serotonergic synapse
118887129 (SLC6A4)
04721 Synaptic vesicle cycle
118887129 (SLC6A4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
bmus02000
]
118887129 (SLC6A4)
Transporters [BR:
bmus02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
118887129 (SLC6A4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF
5HT_transport_N
Motif
Other DBs
NCBI-GeneID:
118887129
NCBI-ProteinID:
XP_036693615
UniProt:
A0A8C0DQG2
LinkDB
All DBs
Position
20:complement(45039653..45074699)
Genome browser
AA seq
629 aa
AA seq
DB search
METTPLNSQELSAYKDGEDCQGNGVLQKGVPAPGDKAESGQISNGYSAVPSPGAGDDTQH
SIPAATTALVAEVHPGERETWGKKMDFLLSVIGYAVDLGNVWRFPYICYQNGGGAFLLPY
TIMAVFGGIPLFYMELALGQYHRNGCISIWRKICPIFKGIGYAICIIAFYIASYYNTIMA
WALYYLISSFAAQLPWTSCKNSWNTGNCTNYFSEDNITWTLHSTSPAEEFYTRHVLQIHR
SKGLQDLGGISWQLALCIMLIFTIIYFSIWKGVKTSGKVVWVTATFPYIILSILLVRGAT
LPGAWRGVLFYLKPNWQKLLETGVWVDAAAQIFFSLGPGFGVLLAFASYNKFNNNCYQDA
LVTSVVNCMTSFVSGFVIFTVLGYMAEMRNEDVSEVAKDAGPSLLFITYAEAIANMPAST
FFAIIFFLMLITLGLDSTFAGLEGVITAVLDEFPHIWSKRREWFVLSVVITCFFGSLITL
TFGGAYVVKLLEEFATGPAVLTVALIEAIAVCWFYGINQFCSDVKEMLGFSPGWFWRICW
VAISPLFLLFIICSFLMSPPQLRLFQYNYPQWSIILGYCIGTSSFICIPMYITYRLIITP
GTLKERLIKGITPETPTEIPCGDIHLNAV
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
atggagaccacacccttaaattcccaggagctatcagcatataaggatggagaagattgt
caaggaaatggtgttctacagaagggtgtccctgcccctggggataaggcagagtccggc
caaatctcgaatgggtactcagctgttccaagccccggtgcaggagacgacactcagcat
tccatcccggctgccaccaccgccctagtggctgaggttcatccaggggaacgggagacg
tggggcaagaagatggatttcctcctctccgtcattggctacgctgtggacctgggcaat
gtctggcgctttccctacatctgttaccagaatggagggggggcattcctcctaccctac
actatcatggccgttttcggggggatcccgctcttctacatggagctcgcgctgggccag
taccaccgaaatggatgcatttcgatatggaggaaaatctgcccaattttcaaagggatc
ggttacgccatctgcatcattgccttttacatcgcctcctactacaacaccatcatggcc
tgggcgctctactacctcatctcctcttttgcggcccagctgccctggaccagctgtaag
aactcctggaacactggcaactgcactaactacttctccgaggacaacatcacctggaca
ctccattcaacatcccctgcagaagaattttatacgcgccacgtcctgcagatccaccgg
tcaaaggggctccaggacctggggggcatcagctggcagcttgccctctgcatcatgctg
atcttcactattatctactttagcatctggaaaggtgtcaaaacatctggcaaggtggtt
tgggtaacagccaccttcccttacatcatcctttcgatcctgctggtgaggggggccacc
ctccccggagcctggaggggagttctcttctatttgaaacccaactggcagaaactcctg
gagacaggggtgtgggtggatgcggccgcccagatcttcttctctctcggtcctggcttt
ggggtcctgctggcttttgcgagctacaacaaattcaacaacaactgttaccaagacgcc
ttggtgaccagtgtggtgaattgcatgacgagcttcgtttcaggatttgtcatcttcaca
gtgctggggtatatggctgagatgaggaacgaagatgtgtctgaggtggccaaagatgca
ggccccagcctgctcttcatcacatatgcggaagccatagccaacatgccagcatccacg
ttctttgccatcatcttcttcctgatgttaatcacactgggcttggacagcacgtttgca
ggcttggagggggtgatcacagccgtgctggatgagtttccacacatctggtccaagcgc
cgggagtggtttgtgctcagcgtggtcattacctgcttctttggatccctgatcaccctg
acttttggaggggcctacgtggtgaagctgctggaggagtttgccacgggacccgcagtg
ctcactgttgccctgatagaagcaattgctgtgtgttggttctatggcatcaatcagttc
tgcagtgatgtgaaggaaatgcttggcttcagccctggatggttttggaggatctgctgg
gtagccatcagccctctgtttctcctgttcatcatttgcagttttttgatgagcccacca
cagctacgactttttcagtataattatcctcagtggagcatcatcctgggttactgcata
ggaacctcatctttcatctgcatcccgatgtatataacttatcggctgatcatcactcca
gggacacttaaggagcgtcttattaaaggtatcactccagaaacaccgacagaaattccc
tgtggggatatccacttgaatgctgtgtaa
DBGET
integrated database retrieval system
