Balaenoptera musculus (blue whale): 118887473
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Entry
118887473 CDS
T09887
Symbol
PRPF8
Name
(RefSeq) pre-mRNA-processing-splicing factor 8
KO
K12856
pre-mRNA-processing factor 8
Organism
bmus
Balaenoptera musculus (blue whale)
Pathway
bmus03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bmus00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
118887473 (PRPF8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bmus03041
]
118887473 (PRPF8)
Spliceosome [BR:
bmus03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
118887473 (PRPF8)
Complex C
U5 SnRNP specific factors
118887473 (PRPF8)
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SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PROCN
PRP8_domainIV
U6-snRNA_bdg
PRO8NT
U5_2-snRNA_bdg
PROCT
RRM_4
JAB
Motif
Other DBs
NCBI-GeneID:
118887473
NCBI-ProteinID:
XP_036694215
UniProt:
A0A8C0DVB8
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Position
20:complement(46495251..46531553)
Genome browser
AA seq
2335 aa
AA seq
DB search
MAGVFPYRGPGNPVPGPLAPLPDYMSEEKLQEKARKWQQLQAKRYAEKRKFGFVDAQKED
MPPEHVRKIIRDHGDMTNRKFRHDKRVYLGALKYMPHAVLKLLENMPMPWEQIRDVPVLY
HITGAISFVNEIPWVIEPVYISQWGSMWIMMRREKRDRRHFKRMRFPPFDDEEPPLDYAD
NILDVEPLEAIQLELDPEEDAPVLDWFYDHQPLRDSRKYVNGSTYQRWQFTLPMMSTLYR
LANQLLTDLVDDNYFYLFDLKAFFTSKALNMAIPGGPKFEPLVRDINLQDEDWNEFNDIN
KIIIRQPIRTEYKIAFPYLYNNLPHHVHLTWYHTPNVVFIKTEDPDLPAFYFDPLINPIS
HRHSVKSQEPLPDDDEEFELPEFVEPFLKDTPLYTDNTANGIALLWAPRPFNLRSGRTRR
ALDIPLVKNWYREHCPAGQPVKVRVSYQKLLKYYVLNALKHRPPKAQKKRYLFRSFKATK
FFQSTKLDWVEVGLQVCRQGYNMLNLLIHRKNLNYLHLDYNFNLKPVKTLTTKERKKSRF
GNAFHLCREVLRLTKLVVDSHVQYRLGNVDAFQLADGLQYIFAHVGQLTGMYRYKYKLMR
QIRMCKDLKHLIYYRFNTGPVGKGPGCGFWAAGWRVWLFFMRGITPLLERWLGNLLARQF
EGRHSKGVAKTVTKQRVESHFDLELRAAVMHDILDMMPEGIKQNKARTILQHLSEAWRCW
KANIPWKVPGLPTPIENMILRYVKAKADWWTNTAHYNRERIRRGATVDKTVCKKNLGRLT
RLYLKAEQERQHNYLKDGPYITAEEAVAVYTTTVHWLESRRFSPIPFPPLSYKHDTKLLI
LALERLKEAYSVKSRLNQSQREELGLIEQAYDNPHEALSRIKRHLLTQRAFKEVGIEFMD
LYSHLVPVYDVEPLEKITDAYLDQYLWYEADKRRLFPPWIKPADTEPPPLLVYKWCQGIN
NLQDVWETSEGECNVMLESRFEKMYEKIDLTLLNRLLRLIVDHNIADYMTAKNNVVINYK
DMNHTNSYGIIRGLQFASFIVQYYGLVMDLLVLGLHRASEMAGPPQMPNDFLSFQDIATE
AAHPIRLFCRYIDRIHIFFRFTADEARDLIQRYLTEHPDPNNENIVGYNNKKCWPRDARM
RLMKHDVNLGRAVFWDIKNRLPRSVTTVQWENSFVSVYSKDNPNLLFNMCGFECRILPKC
RTSYEEFTHKDGVWNLQNEVTKERTAQCFLRVDDESMQRFHNRVRQILMASGSTTFTKIV
NKWNTALIGLMTYFREAVVNTQELLDLLVKCENKIQTRIKIGLNSKMPSRFPPVVFYTPK
ELGGLGMLSMGHVLIPQSDLRWSKQTDVGITHFRSGMSHEEDQLIPNLYRYIQPWESEFI
DSQRVWAEYALKRQEAIAQNRRLTLEDLEDSWDRGIPRINTLFQKDRHTLAYDKGWRVRT
DFKQYQVLKQNPFWWTHQRHDGKLWNLNNYRTDMIQALGGVEGILEHTLFKGTYFPTWEG
LFWEKASGFEESMKWKKLTNAQRSGLNQIPNRRFTLWWSPTINRANVYVGFQVQLDLTGI
FMHGKIPTLKISLIQIFRAHLWQKIHESIVMDLCQVFDQELDALEIETVQKETIHPRKSY
KMNSSCADILLFASYKWNVSRPSLLADSKDVMDSTTTQKYWIDIQLRWGDYDSHDIERYA
RAKFLDYTTDNMSIYPSPTGVLIAIDLAYNLHSAYGNWFPGSKPLIQQAMAKIMKANPAL
YVLRERIRKGLQLYSSEPTEPYLSSQNYGELFSNQIIWFVDDTNVYRVTIHKTFEGNLTT
KPINGAIFIFNPRTGQLFLKIIHTSVWAGQKRLGQLAKWKTAEEVAALIRSLPVEEQPKQ
IIVTRKGMLDPLEVHLLDFPNIVIKGSELQLPFQACLKVEKFGDLILKATEPQMVLFNLY
DDWLKTISSYTAFSRLILILRALHVNNDRAKVILKPDKTTITEPHHIWPTLTDEEWIKVE
VQLKDLILADYGKKNNVNVASLTQSEIRDIILGMEISAPSQQRQQIAEIEKQTKEQSQLT
ATQTRTVNKHGDEIITSTTSNYETQTFSSKTEWRVRAISAANLHLRTNHIYVSSDDIKET
GYTYILPKNVLKKFICISDLRAQIAGYLYGVSPPDNPQVKEIRCIVMVPQWGTHQTVHLP
GQLPQHEYLKEMEPLGWIHTQPNESPQLSPQDVTTHAKIMADNPSWDGEKTIIITCSFTP
GSCTLTAYKLTPSGYEWGRQNTDKGNNPKGYLPSHYERVQMLLSDRFLGFFMVPAQSSWN
YNFMGVRHDPNMKYELQLANPKEFYHEVHRPSHFLNFALLQEGEVYSADREDLYA
NT seq
7008 nt
NT seq
+upstream
nt +downstream
nt
atggccggagtatttccttaccgagggccgggtaacccggtgcctggccctctagccccg
ctgccagactacatgtcggaggagaagcttcaggagaaagcccgaaaatggcagcaattg
caggccaagcgctatgcagaaaagcggaagtttggatttgtggatgctcaaaaggaagac
atgcctccagaacatgtcaggaagatcattcgagaccatggagacatgaccaacaggaag
tttcgccatgacaaaagggtgtacttgggtgccctaaagtacatgccccatgcagtcctc
aaactcctggagaacatgcctatgccttgggagcagattcgggatgtgcctgtgctgtac
cacatcactggagccatttcctttgtcaatgagattccctgggtcattgaacctgtctac
atctcccagtgggggtcaatgtggattatgatgcgtcgagaaaaaagagacaggaggcat
ttcaagaggatgcgtttccccccttttgatgatgaggagccgcctttggactatgctgac
aacatcctagatgttgagccactggaggccattcagctagagctggaccctgaggaagat
gcccctgtgttggactggttctatgaccaccagccattgagggacagccggaagtatgtg
aatggttccacttaccaacgctggcagttcacactgcctatgatgtccactctctaccgc
ctggccaatcagctcctgacagacttggtagatgacaattacttctatctgtttgatctg
aaggccttttttacctccaaggcactcaatatggccattcctggaggccccaaatttgag
cctcttgtccgagacatcaacctacaggatgaagactggaatgaattcaatgatattaac
aagatcatcatccggcagcccatccgcactgagtacaagattgcttttccttacttgtac
aacaaccttccacaccatgtccacctcacctggtaccacactcctaatgttgtgttcatc
aaaactgaggatcctgatttgccagctttctactttgatcctttgatcaacccaatttcc
cataggcactctgtcaagagtcaggaaccattgccagatgacgacgaggagtttgagctc
ccagagtttgtggagcccttcttgaaagacacacccctctacacagacaatacagccaat
ggcattgccctgctttgggccccacggcccttcaacctacgctctggtcgcacccgccgg
gccctagacattcctcttgtcaagaactggtatcgggagcattgtcctgctgggcagcct
gtgaaagtgagggtctcctaccagaagctgcttaagtactatgtgctgaatgccctgaag
caccggccccctaaagcgcaaaagaagaggtatctgttccgttccttcaaagccaccaaa
ttctttcagtctacaaagctggactgggtggaggtggggctgcaggtttgccgccagggc
tacaacatgctcaaccttctcattcaccgtaaaaacctcaactatctgcacctggactac
aacttcaacctcaagcccgtcaagacgctcaccaccaaggaacgaaagaaatctcgtttt
gggaatgctttccatctgtgtcgagaggttctgcgcttaactaagctggtggtggacagt
catgtgcagtatcggttgggcaatgtggatgccttccagctggcagatgggttgcagtat
atctttgcgcacgtggggcagctgacgggcatgtaccggtacaaatacaagctgatgcgg
cagattcgcatgtgcaaggacctgaagcatctcatctattaccgcttcaacacgggcccg
gtagggaagggccctggctgcggtttctgggctgctggctggcgggtctggctgtttttc
atgcgtggcatcacccctttgctggagcgatggctgggtaacctcctggcccggcagttt
gaaggccgacactcaaagggggtggcaaagaccgtaacaaagcagcgagtggagtcacat
tttgaccttgagcttcgggcagctgtgatgcatgacattctggacatgatgcctgagggg
atcaaacagaacaaggcccggacaatcctgcagcacctcagtgaagcctggcgctgctgg
aaggccaatattccctggaaggtccctggtttgccaacacctatagagaatatgattctt
cgatacgtgaaggccaaggctgactggtggaccaacactgcgcactacaaccgagaacgg
atccgccgtggggccactgtagacaagactgtttgcaaaaagaacctgggacgcctcact
cggctctacctgaaggcagaacaagaacggcagcacaactacctaaaggacgggccttac
atcacagcagaagaagcggtggcagtgtataccaccactgtgcattggctggaaagccgt
aggttctcacccatcccgttccccccactctcctacaagcacgacaccaagttgctcatc
ttggccttggagcggctcaaggaagcttacagtgtgaagtctcggttaaaccagtcgcag
agggaggagctaggtctgatcgagcaagcctatgacaacccccacgaggcattgtcccgc
atcaagcgtcacctcctcacacagagagcctttaaagaagtgggcattgagttcatggat
ctctatagccacctggtgcccgtgtatgatgtggagccactggagaagataactgacgcc
tacctggaccagtacctgtggtatgaagctgacaagcgccgccttttcccaccctggatc
aagcctgctgacacagaaccacctcctctgcttgtttacaagtggtgccaaggcatcaat
aacctgcaggacgtgtgggagacaagtgagggcgagtgcaacgtcatgctggagtcacga
tttgagaagatgtatgagaagatagatttgaccctgcttaatcggctgctgcgcctcatc
gtagaccacaacatagccgactacatgacagccaagaacaacgttgtcatcaactacaag
gacatgaaccatacgaattcatatgggatcattagaggcctgcagtttgcctcattcatc
gtacagtactatggcttggttatggatttgcttgtgttgggattgcaccgggccagtgag
atggctgggccccctcagatgccaaacgattttctcagtttccaagacatagccaccgag
gctgcccaccccatccgtctcttctgcagatacatcgatcgcatccatatttttttcagg
ttcacagcagatgaggctcgggacctgatccagcgttacctgacagagcaccctgacccc
aacaatgaaaacatcgttggctataataacaagaaatgctggccccgagatgcccgcatg
cgcctcatgaagcatgatgtcaacttgggtcgggcagtgttctgggacatcaagaaccgt
ctgccacgctcagtgactacagttcagtgggagaacagcttcgtgtccgtctacagtaag
gacaaccccaacttgctgttcaacatgtgtggatttgagtgccgcatcctgcctaaatgc
cgcaccagctatgaggagttcacccacaaggatggggtctggaacctacagaatgaggtt
actaaggagcgaacagctcagtgtttcctgcgtgtggatgatgagtcaatgcagcgcttc
cacaaccgtgtgcgtcaaattctgatggcctctggctccaccaccttcaccaagattgtg
aataagtggaacacagctcttattggccttatgacatactttcgggaggctgtggtgaac
acccaggagctcctggacttgctggtgaagtgtgagaacaagatccagacacgaatcaag
attggcctcaactccaagatgccgagtcgcttcccccctgtcgtgttctacacccctaag
gagttgggtggacttggcatgctctcaatgggccatgtgctcatcccccaatctgaccta
aggtggtccaagcagacagatgtaggtatcacacactttcgttcaggaatgagccatgaa
gaagaccagctgattcccaacttgtatcgctacatacagccctgggagagtgagttcatt
gattctcagcgggtctgggctgagtatgcactcaagagacaagaggccattgcgcagaac
agacgactgaccctagaagatctagaggattcatgggatcgtggcattcctcgaatcaac
accctcttccagaaggaccggcacacactggcttatgataagggttggcgtgtccgaact
gactttaagcagtaccaggttttgaagcagaaccctttttggtggacacaccagcggcat
gatggaaagctgtggaacctgaacaactaccgtacagacatgatccaggccctgggtggt
gtggaaggcattctggaacacactctcttcaagggcacttacttccctacctgggagggg
cttttctgggagaaggccagtggttttgaggagtctatgaagtggaagaaactaaccaat
gctcagcgatcaggattgaaccagattcccaatcgtagattcaccctctggtggtccccg
accatcaaccgagccaacgtatacgtaggctttcaggtgcagctggacctgacaggtatc
ttcatgcacggcaagatccccacactgaagatctctctcatccagatcttccgagctcac
ttgtggcagaagatccacgagagcatcgttatggatttgtgtcaggtgtttgatcaggaa
ctggatgcactggaaattgagaccgtacaaaaggagacaatccacccccgaaagtcctat
aagatgaactcttcctgtgcagatatcctgctctttgcctcctataagtggaatgtctcc
cggccctcattgctggcagactctaaggatgtgatggacagcaccaccactcagaagtat
tggattgacatccagttgcgctggggggactatgattcccatgacattgagcgctacgcc
cgggccaagttcttggactacaccacagacaacatgagtatctacccttcacccacaggt
gtgctcattgccatcgacctggcctataacctgcatagtgcctatggaaactggttccct
ggcagcaagcccctcatacagcaggccatggccaagatcatgaaggcaaacccggccttg
tatgtgttacgtgaacggatccgtaaagggctgcagctttattcatctgagcccactgag
ccctatctgtcctctcagaactatggtgagctcttttccaaccagattatctggtttgtg
gatgacacgaatgtctacagagtgactatccataagacctttgaagggaacctgaccacc
aagcccatcaatggggccatcttcatcttcaacccacgcacagggcagctgtttctcaag
ataattcacacatctgtgtgggctggacagaagcgtttggggcagttggctaagtggaag
acagctgaggaggtggctgccctgatccgatctctgccagtggaggagcagcccaagcag
atcattgtcaccaggaaaggcatgctcgatccattggaggtgcacttgctggacttcccc
aatattgtgatcaaaggatcagagctccagctccccttccaggcttgtctcaaggtggaa
aagtttggggatctcatccttaaagccactgagccgcagatggttctctttaacctctat
gatgactggctcaagactatctcatcttacacggctttctcccgcctcatcctgattctg
cgtgccctgcatgtgaacaacgaccgggcgaaggtgatcctgaagccagacaagactacg
atcacagaaccacaccacatctggcccactctgactgacgaggagtggatcaaggtggag
gtgcagctcaaggaccttatcttggctgactatggcaagaaaaacaatgtgaatgtggca
tcactgacacaatcagaaattcgagacatcatcctgggtatggagatctcggcaccatca
cagcagcggcagcagatagctgagattgagaagcagaccaaggaacagtcacagctgact
gcaacccagactcgtactgtcaacaagcatggtgacgaaatcatcacctctaccaccagc
aactatgagacccagactttctcatctaagactgaatggagggtcagggccatttctgcc
gccaacctgcacctaaggaccaatcacatctatgtttcatctgatgacatcaaggagact
ggttatacctatattcttcccaagaatgtgcttaagaagtttatctgcatatctgacctt
cgggcccaaattgcagggtacctctatggggtgagcccaccagataacccccaggtgaag
gagatccgctgcatcgtgatggtaccacagtggggcactcaccagactgtgcacctgcct
ggccagctgcctcagcatgagtacctcaaggagatggaacccttaggttggatccacact
cagcccaatgaatccccccagctgtcaccccaggatgtcaccacccatgccaagatcatg
gctgacaacccatcttgggatggcgagaagaccattatcatcacctgcagcttcacacca
ggctcctgcaccctgacagcctacaagctgacccccagtggctatgaatggggccgccag
aacacagacaagggcaacaaccccaagggctacctaccctcacactacgagagggtccag
atgctactgtcagaccgcttccttggcttctttatggttcctgcccagtcctcatggaac
tacaactttatgggtgttcggcatgatcccaacatgaagtatgagctgcagctggcaaac
cccaaagagttctaccacgaggtgcacagaccttcccacttcctcaactttgctctcctg
caggagggcgaggtctactctgcggaccgagaggacctctatgcctag
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integrated database retrieval system
