Balaenoptera musculus (blue whale): 118888204
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Entry
118888204 CDS
T09887
Name
(RefSeq) polyadenylate-binding protein 5
KO
K13126
polyadenylate-binding protein
Organism
bmus
Balaenoptera musculus (blue whale)
Pathway
bmus03015
mRNA surveillance pathway
bmus03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bmus00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
118888204
09123 Folding, sorting and degradation
03018 RNA degradation
118888204
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bmus03019
]
118888204
03041 Spliceosome [BR:
bmus03041
]
118888204
Messenger RNA biogenesis [BR:
bmus03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
118888204
mRNA cycle factors
Stress granule specific factors
118888204
Spliceosome [BR:
bmus03041
]
Complex C
Other components
Complex C specific factors
118888204
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_occluded
RRM_10
RRM_3
TC1
Motif
Other DBs
NCBI-GeneID:
118888204
NCBI-ProteinID:
XP_036695063
UniProt:
A0A8B8WD40
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All DBs
Position
X:75937445..75941495
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AA seq
382 aa
AA seq
DB search
MGSGEPNPAGKKKKYLKAALYVGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLG
YGYVNFRFPADAEWALNTMNFDLINGKPFRLMWSQPDDRLRKSGVGNIFIKNLDKSIDNR
ALFYLFSAFGSILSCKVVCDDNGSKGYAYVHFDSLAAANRAIWHMNGVRLNNRQVYVGRF
KFPEERAAEVRTRDRATFTNVFVKNFGDDMDDDKLKELFSEYGPTESVKVIRDASGKSKG
FGFVRYETHEAAQKAVLDLHGKSIDGKVLYVGRAQKKIERLAELRRRFERLRLKEKSRPP
GVPIYIKNLDETIDDEKLKEEFSSFGSISRAKVMVEVGQGKGFGVVCFSSFEEATKAVDE
MNGRIVGSKPLHVTLGQARRRW
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atggggagtggggagcctaatcctgctggcaagaaaaagaagtacctcaaggctgccctg
tatgtgggtgacttggacccagatgtcaccgaggacatgttatataaaaagttcaggcct
gctggccctctgcgcttcacccgaatctgccgtgacccggtgacccgcagccccctgggc
tatggctatgttaacttccgctttcctgcggatgctgagtgggccttgaacaccatgaat
tttgatttgattaacggcaaacctttccgcctaatgtggtctcagccagatgaccgctta
agaaagtctggagttggaaatatattcatcaaaaacctggacaaatccatagacaatagg
gcccttttttatctgttttctgcttttgggagcattctctcctgcaaagtcgtatgcgat
gacaacggctctaagggttatgcctatgtgcactttgacagcctggccgctgccaatagg
gccatctggcacatgaatggagtgcggctcaacaaccgccaggtgtacgttggccgattc
aaatttccggaagagcgggcagctgaagttagaactagggatagagcgactttcaccaat
gttttcgttaaaaactttggagatgacatggatgacgacaaactgaaggaacttttcagt
gagtacgggccaactgagagtgttaaggtaataagagatgccagtgggaaatcgaaaggc
tttggatttgtgagatacgagacacacgaggctgcccaaaaggctgtgttagacctgcat
ggaaagtccatcgatgggaaagtcctctatgtagggcgagcacagaagaaaattgaacgc
ctggctgagttaaggcgaagatttgagcggctgagattaaaagaaaaaagtcggcctcca
ggggtgcctatctatattaagaacctagacgagaccatcgatgatgaaaaactgaaggag
gaattttcttcctttggatcaattagccgggccaaagtgatggtggaagtggggcaaggc
aaagggtttggtgtcgtctgcttctcctcttttgaagaggctaccaaagcagtagatgag
atgaatggtcgcatagtgggctccaagcctctgcatgtcaccctgggccaggccaggcgc
aggtggtga
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